RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 NOP2P46087 812 aaKnown RBP6.89□□□□□ -1.31
CHRNA3-204ENST00000559002 IFI16Q16666 785 aaKnown RBP6.89□□□□□ -1.31
CHRNA3-204ENST00000559002 PUS10Q3MIT2 529 aaKnown RBP6.89□□□□□ -1.31
CHRNA3-204ENST00000559002 LEXMQ3ZCV2 418 aa6.89□□□□□ -1.31
CHRNA3-204ENST00000559002 ARHGAP29Q52LW3 1261 aa6.89□□□□□ -1.31
CHRNA3-204ENST00000559002 STXBP5Q5T5C0 1151 aa6.89□□□□□ -1.31
CHRNA3-204ENST00000559002 SND1Q7KZF4 910 aaKnown RBP eCLIP6.89□□□□□ -1.31
CHRNA3-204ENST00000559002 BEND5Q7L4P6 421 aa6.89□□□□□ -1.31
CHRNA3-204ENST00000559002 ARCQ7LC44 396 aa6.89□□□□□ -1.31
CHRNA3-204ENST00000559002 OTOP3Q7RTS5 596 aa6.89□□□□□ -1.31
CHRNA3-204ENST00000559002 MIB1Q86YT6 1006 aa6.89□□□□□ -1.31
CHRNA3-204ENST00000559002 ARL14EPQ8N8R7 260 aaPredicted RBP6.89□□□□□ -1.31
CHRNA3-204ENST00000559002 TTC16Q8NEE8 873 aa6.89□□□□□ -1.31
CHRNA3-204ENST00000559002 FEZF2Q8TBJ5 459 aa6.89□□□□□ -1.31
CHRNA3-204ENST00000559002 DQX1Q8TE96 717 aaKnown RBP6.89□□□□□ -1.31
CHRNA3-204ENST00000559002 RXFP2Q8WXD0 754 aa6.89□□□□□ -1.31
CHRNA3-204ENST00000559002 ACSF2Q96CM8 615 aaPredicted RBP6.89□□□□□ -1.31
CHRNA3-204ENST00000559002 DDX23Q9BUQ8 820 aaKnown RBP6.89□□□□□ -1.31
CHRNA3-204ENST00000559002 SMOC2Q9H3U7 446 aa6.89□□□□□ -1.31
CHRNA3-204ENST00000559002 POMKQ9H5K3 350 aa6.89□□□□□ -1.31
CHRNA3-204ENST00000559002 OSER1Q9NX31 292 aa6.89□□□□□ -1.31
CHRNA3-204ENST00000559002 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.89□□□□□ -1.31
CHRNA3-204ENST00000559002 GDE1Q9NZC3 331 aa6.89□□□□□ -1.31
CHRNA3-204ENST00000559002 MARCH2Q9P0N8 246 aa6.89□□□□□ -1.31
CHRNA3-204ENST00000559002 COX16Q9P0S2 106 aa6.89□□□□□ -1.31
CHRNA3-204ENST00000559002 THEGQ9P2T0 379 aa6.89□□□□□ -1.31
CHRNA3-204ENST00000559002 LCMT1Q9UIC8 334 aa6.89□□□□□ -1.31
CHRNA3-204ENST00000559002 DNMT3LQ9UJW3 386 aa6.89□□□□□ -1.31
CHRNA3-204ENST00000559002 ANAPC7Q9UJX3 599 aa6.89□□□□□ -1.31
CHRNA3-204ENST00000559002 TMEM59LQ9UK28 342 aa6.89□□□□□ -1.31
CHRNA3-204ENST00000559002 NUDT5Q9UKK9 219 aa6.89□□□□□ -1.31
CHRNA3-204ENST00000559002 CDH7Q9ULB5 785 aa6.89□□□□□ -1.31
CHRNA3-204ENST00000559002 TFR2Q9UP52 801 aa6.89□□□□□ -1.31
CHRNA3-204ENST00000559002 NAALADL1Q9UQQ1 740 aa6.89□□□□□ -1.31
CHRNA3-204ENST00000559002 PPP2R2CQ9Y2T4 447 aa6.89□□□□□ -1.31
CHRNA3-204ENST00000559002 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.89□□□□□ -1.31
CHRNA3-204ENST00000559002 PATJQ8NI35 1801 aa6.89□□□□□ -1.31
CHRNA3-204ENST00000559002 MYH10P35580 1976 aa6.89□□□□□ -1.31
CHRNA3-204ENST00000559002 MTCL1Q9Y4B5 1905 aaKnown RBP6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 A0A0A6YYK5 440 aaPredicted RBP6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 A0A0U1RQJ8 604 aa6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 TCRBV5S1A1TA0A578 114 aa6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 SLC12A8A0AV02 714 aa6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 MACROD2A1Z1Q3 448 aa6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 RCCD1A6NED2 376 aa6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 GRXCR2A6NFK2 248 aa6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 TMEM191CA6NGB0 347 aa6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 C2CD4BA6NLJ0 364 aa6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 TMEM110-MUSTN1A8MSY1 372 aa6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 BTNL10A8MVZ5 291 aa6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 M0QYT0 321 aa6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 MYO1FO00160 1098 aa6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 NRG2O14511 850 aaPredicted RBP6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 MDM4O15151 490 aa6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 PJA2O43164 708 aa6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 CCP110O43303 1012 aa6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 BUB1O43683 1085 aa6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 MOSPD3O75425 235 aa6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 TRUB2O95900 331 aaKnown RBP6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 TBX18O95935 607 aa6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 IRF1P10914 325 aa6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 RDXP35241 583 aaKnown RBP6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 PTPN9P43378 593 aa6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 PGFP49763 221 aa6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 KPNA1P52294 538 aaPredicted RBP6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 ZNF143P52747 638 aaPredicted RBP6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 TBX4P57082 545 aa6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 RPL7AP62424 266 aaKnown RBP6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 SLC7A9P82251 487 aa6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 COG7P83436 770 aa6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 ATP11AP98196 1134 aa6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 DEUP1Q05D60 604 aa6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 NME3Q13232 169 aa6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 CDO1Q16878 200 aa6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 AAK1Q2M2I8 961 aa6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 SLC25A52Q3SY17 297 aa6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 PPP1R15BQ5SWA1 713 aa6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 SYPL2Q5VXT5 272 aa6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 PTCRAQ6ISU1 281 aaPredicted RBP6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 MSANTD2Q6P1R3 559 aa6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 KLHDC10Q6PID8 442 aa6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 TAC4Q86UU9 113 aa6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 DDX42Q86XP3 938 aaKnown RBP eCLIP6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 NPAS3Q8IXF0 933 aa6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 CMTM8Q8IZV2 173 aa6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 ZNF276Q8N554 614 aa6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 TDRD5Q8NAT2 981 aaKnown RBP6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 ZSCAN18Q8TBC5 510 aaPredicted RBP6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 SLC35G2Q8TBE7 412 aa6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 ADAM32Q8TC27 787 aa6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 FNIP1Q8TF40 1166 aa6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 FAM172AQ8WUF8 416 aa6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 ATRIPQ8WXE1 791 aa6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 SUSD6Q92537 303 aa6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 FGF13Q92913 245 aa6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 KHSRPQ92945 711 aaKnown RBP eCLIP6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 RNF34Q969K3 372 aa6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 CALR3Q96L12 384 aaKnown RBP6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 CFAP57Q96MR6 1250 aa6.88□□□□□ -1.31
CHRNA3-204ENST00000559002 TBCBQ99426 244 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms