RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 TMEM184AQ6ZMB5 413 aa18.87■□□□□ 0.61
CLPX-203ENST00000558958 STRADAQ7RTN6 431 aa18.87■□□□□ 0.61
CLPX-203ENST00000558958 HS6ST3Q8IZP7 471 aa18.87■□□□□ 0.61
CLPX-203ENST00000558958 EFHBQ8N7U6 833 aa18.87■□□□□ 0.61
CLPX-203ENST00000558958 DQX1Q8TE96 717 aaKnown RBP18.87■□□□□ 0.61
CLPX-203ENST00000558958 RNF139Q8WU17 664 aa18.87■□□□□ 0.61
CLPX-203ENST00000558958 FAM172AQ8WUF8 416 aa18.87■□□□□ 0.61
CLPX-203ENST00000558958 CASP10Q92851 521 aa18.87■□□□□ 0.61
CLPX-203ENST00000558958 CD101Q93033 1021 aa18.87■□□□□ 0.61
CLPX-203ENST00000558958 ZNF707Q96C28 371 aaPredicted RBP18.87■□□□□ 0.61
CLPX-203ENST00000558958 LRCH3Q96II8 777 aa18.87■□□□□ 0.61
CLPX-203ENST00000558958 CORO1BQ9BR76 489 aa18.87■□□□□ 0.61
CLPX-203ENST00000558958 PRKD2Q9BZL6 878 aa18.87■□□□□ 0.61
CLPX-203ENST00000558958 RAB6CQ9H0N0 254 aa18.87■□□□□ 0.61
CLPX-203ENST00000558958 DZANK1Q9NVP4 752 aa18.87■□□□□ 0.61
CLPX-203ENST00000558958 CALCOCO1Q9P1Z2 691 aa18.87■□□□□ 0.61
CLPX-203ENST00000558958 MTCH2Q9Y6C9 303 aa18.87■□□□□ 0.61
CLPX-203ENST00000558958 CCDC195A0A1B0GUA6 201 aa18.86■□□□□ 0.61
CLPX-203ENST00000558958 M0QYT0 321 aa18.86■□□□□ 0.61
CLPX-203ENST00000558958 PCK1P35558 622 aa18.86■□□□□ 0.61
CLPX-203ENST00000558958 EPHA5P54756 1037 aa18.86■□□□□ 0.61
CLPX-203ENST00000558958 HDAC4P56524 1084 aa18.86■□□□□ 0.61
CLPX-203ENST00000558958 ADGRE1Q14246 886 aa18.86■□□□□ 0.61
CLPX-203ENST00000558958 GAREM2Q75VX8 874 aa18.86■□□□□ 0.61
CLPX-203ENST00000558958 RSRC2Q7L4I2 434 aaKnown RBP18.86■□□□□ 0.61
CLPX-203ENST00000558958 PGAP3Q96FM1 320 aaPredicted RBP18.86■□□□□ 0.61
CLPX-203ENST00000558958 HES6Q96HZ4 224 aa18.86■□□□□ 0.61
CLPX-203ENST00000558958 NCAPGQ9BPX3 1015 aa18.86■□□□□ 0.61
CLPX-203ENST00000558958 TLR10Q9BXR5 811 aa18.86■□□□□ 0.61
CLPX-203ENST00000558958 SMOC2Q9H3U7 446 aa18.86■□□□□ 0.61
CLPX-203ENST00000558958 ASAH2Q9NR71 780 aa18.86■□□□□ 0.61
CLPX-203ENST00000558958 OLA1Q9NTK5 396 aaKnown RBP18.86■□□□□ 0.61
CLPX-203ENST00000558958 DNMT3BQ9UBC3 853 aaKnown RBP18.86■□□□□ 0.61
CLPX-203ENST00000558958 NUDT5Q9UKK9 219 aa18.86■□□□□ 0.61
CLPX-203ENST00000558958 PACSIN2Q9UNF0 486 aaPredicted RBP18.86■□□□□ 0.61
CLPX-203ENST00000558958 CTAGE9A4FU28 777 aa18.85■□□□□ 0.61
CLPX-203ENST00000558958 SPDYE4A6NLX3 237 aa18.85■□□□□ 0.61
CLPX-203ENST00000558958 ENC1O14682 589 aa18.85■□□□□ 0.61
CLPX-203ENST00000558958 NCK2O43639 380 aa18.85■□□□□ 0.61
CLPX-203ENST00000558958 TLR5O60602 858 aa18.85■□□□□ 0.61
CLPX-203ENST00000558958 GLP2RO95838 553 aa18.85■□□□□ 0.61
CLPX-203ENST00000558958 TRUB2O95900 331 aaKnown RBP18.85■□□□□ 0.61
CLPX-203ENST00000558958 IGLV3-25P01717 112 aa18.85■□□□□ 0.61
CLPX-203ENST00000558958 TCF4P15884 667 aa18.85■□□□□ 0.61
CLPX-203ENST00000558958 PTPN2P17706 415 aa18.85■□□□□ 0.61
CLPX-203ENST00000558958 GABRR2P28476 465 aa18.85■□□□□ 0.61
CLPX-203ENST00000558958 CASQ1P31415 396 aa18.85■□□□□ 0.61
CLPX-203ENST00000558958 TAS2R40P59535 323 aa18.85■□□□□ 0.61
CLPX-203ENST00000558958 TAC4Q86UU9 113 aa18.85■□□□□ 0.61
CLPX-203ENST00000558958 CMASQ8NFW8 434 aaPredicted RBP18.85■□□□□ 0.61
CLPX-203ENST00000558958 ADAM32Q8TC27 787 aa18.85■□□□□ 0.61
CLPX-203ENST00000558958 CDK5RAP1Q96SZ6 601 aaKnown RBP18.85■□□□□ 0.61
CLPX-203ENST00000558958 NAPGQ99747 312 aaPredicted RBP18.85■□□□□ 0.61
CLPX-203ENST00000558958 CCSER2Q9H7U1 834 aa18.85■□□□□ 0.61
CLPX-203ENST00000558958 SFXN1Q9H9B4 322 aa18.85■□□□□ 0.61
CLPX-203ENST00000558958 HCFC1R1Q9NWW0 138 aa18.85■□□□□ 0.61
CLPX-203ENST00000558958 MIF4GDA9UHW6 222 aaKnown RBP18.84■□□□□ 0.61
CLPX-203ENST00000558958 LINC01565O15544 149 aa18.84■□□□□ 0.61
CLPX-203ENST00000558958 TBX18O95935 607 aa18.84■□□□□ 0.61
CLPX-203ENST00000558958 F9P00740 461 aa18.84■□□□□ 0.61
CLPX-203ENST00000558958 ATP1A1P05023 1023 aaKnown RBP18.84■□□□□ 0.61
CLPX-203ENST00000558958 MIPP30301 263 aa18.84■□□□□ 0.61
CLPX-203ENST00000558958 SSR1P43307 286 aaKnown RBP18.84■□□□□ 0.61
CLPX-203ENST00000558958 TUBP50607 506 aa18.84■□□□□ 0.61
CLPX-203ENST00000558958 SLC25A11Q02978 314 aaKnown RBP18.84■□□□□ 0.61
CLPX-203ENST00000558958 EIF4EBP2Q13542 120 aaPredicted RBP18.84■□□□□ 0.61
CLPX-203ENST00000558958 RPS6KA1Q15418 735 aa18.84■□□□□ 0.61
CLPX-203ENST00000558958 C10orf120Q5SQS8 335 aa18.84■□□□□ 0.61
CLPX-203ENST00000558958 HECTD3Q5T447 861 aa18.84■□□□□ 0.61
CLPX-203ENST00000558958 C12orf76Q8N812 135 aaPredicted RBP18.84■□□□□ 0.61
CLPX-203ENST00000558958 FAM204AQ9H8W3 233 aa18.84■□□□□ 0.61
CLPX-203ENST00000558958 PIGVQ9NUD9 493 aa18.84■□□□□ 0.61
CLPX-203ENST00000558958 DDIT4Q9NX09 232 aa18.84■□□□□ 0.61
CLPX-203ENST00000558958 SFMBT1Q9UHJ3 866 aa18.84■□□□□ 0.61
CLPX-203ENST00000558958 USP18Q9UMW8 372 aa18.84■□□□□ 0.61
CLPX-203ENST00000558958 PRRC2BQ5JSZ5 2229 aaKnown RBP18.84■□□□□ 0.61
CLPX-203ENST00000558958 PSTPIP1O43586 416 aa18.84■□□□□ 0.61
CLPX-203ENST00000558958 FGF19O95750 216 aa18.84■□□□□ 0.61
CLPX-203ENST00000558958 OAS1P00973 400 aaKnown RBP18.84■□□□□ 0.61
CLPX-203ENST00000558958 RHOP08100 348 aa18.84■□□□□ 0.61
CLPX-203ENST00000558958 SRGAP2BP0DMP2 458 aa18.84■□□□□ 0.61
CLPX-203ENST00000558958 MYL4P12829 197 aa18.84■□□□□ 0.61
CLPX-203ENST00000558958 CTNNA2P26232 953 aa18.84■□□□□ 0.61
CLPX-203ENST00000558958 CDC25CP30307 473 aa18.84■□□□□ 0.61
CLPX-203ENST00000558958 CTNNA1P35221 906 aaKnown RBP18.84■□□□□ 0.61
CLPX-203ENST00000558958 RDXP35241 583 aaKnown RBP18.84■□□□□ 0.61
CLPX-203ENST00000558958 ATXN1P54253 815 aaKnown RBP18.84■□□□□ 0.61
CLPX-203ENST00000558958 DEUP1Q05D60 604 aa18.84■□□□□ 0.61
CLPX-203ENST00000558958 NME3Q13232 169 aa18.84■□□□□ 0.61
CLPX-203ENST00000558958 ADAM15Q13444 863 aa18.84■□□□□ 0.61
CLPX-203ENST00000558958 LRRC38Q5VT99 294 aa18.84■□□□□ 0.61
CLPX-203ENST00000558958 KLHDC10Q6PID8 442 aa18.84■□□□□ 0.61
CLPX-203ENST00000558958 TADA2BQ86TJ2 420 aa18.84■□□□□ 0.61
CLPX-203ENST00000558958 RHOT1Q8IXI2 618 aa18.84■□□□□ 0.61
CLPX-203ENST00000558958 LEMD2Q8NC56 503 aa18.84■□□□□ 0.61
CLPX-203ENST00000558958 KRT35Q92764 455 aa18.84■□□□□ 0.61
CLPX-203ENST00000558958 WDR6Q9NNW5 1121 aaKnown RBP18.84■□□□□ 0.61
CLPX-203ENST00000558958 PCSK1NQ9UHG2 260 aa18.84■□□□□ 0.61
CLPX-203ENST00000558958 PCDHA3Q9Y5H8 950 aa18.84■□□□□ 0.61
CLPX-203ENST00000558958 REV3LO60673 3130 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms