RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 LINC00597Q9H2U6 94 aa8.52□□□□□ -1.05
TRAF3-205ENST00000558700 FBXO44Q9H4M3 255 aa8.52□□□□□ -1.05
TRAF3-205ENST00000558700 CYP3A43Q9HB55 503 aa8.52□□□□□ -1.05
TRAF3-205ENST00000558700 CSNK1G1Q9HCP0 422 aa8.52□□□□□ -1.05
TRAF3-205ENST00000558700 PNPLA8Q9NP80 782 aa8.52□□□□□ -1.05
TRAF3-205ENST00000558700 GMIPQ9P107 970 aa8.52□□□□□ -1.05
TRAF3-205ENST00000558700 MMP17Q9ULZ9 603 aa8.52□□□□□ -1.05
TRAF3-205ENST00000558700 PCDHGA5Q9Y5G8 931 aa8.52□□□□□ -1.05
TRAF3-205ENST00000558700 PLXND1Q9Y4D7 1925 aa8.52□□□□□ -1.05
TRAF3-205ENST00000558700 TNFRSF10BO14763 440 aa8.51□□□□□ -1.05
TRAF3-205ENST00000558700 SCAMP3O14828 347 aaKnown RBP8.51□□□□□ -1.05
TRAF3-205ENST00000558700 SLC30A4O14863 429 aa8.51□□□□□ -1.05
TRAF3-205ENST00000558700 STX10O60499 249 aa8.51□□□□□ -1.05
TRAF3-205ENST00000558700 TLR5O60602 858 aa8.51□□□□□ -1.05
TRAF3-205ENST00000558700 CILPO75339 1184 aa8.51□□□□□ -1.05
TRAF3-205ENST00000558700 ALDH1A2O94788 518 aa8.51□□□□□ -1.05
TRAF3-205ENST00000558700 RHOBTB1O94844 696 aa8.51□□□□□ -1.05
TRAF3-205ENST00000558700 ZDHHC11BP0C7U3 371 aa8.51□□□□□ -1.05
TRAF3-205ENST00000558700 EPB41P11171 864 aaKnown RBP8.51□□□□□ -1.05
TRAF3-205ENST00000558700 MPLP40238 635 aa8.51□□□□□ -1.05
TRAF3-205ENST00000558700 GCLMP48507 274 aa8.51□□□□□ -1.05
TRAF3-205ENST00000558700 MXI1P50539 228 aa8.51□□□□□ -1.05
TRAF3-205ENST00000558700 DGKEP52429 567 aa8.51□□□□□ -1.05
TRAF3-205ENST00000558700 ATXN1P54253 815 aaKnown RBP8.51□□□□□ -1.05
TRAF3-205ENST00000558700 MAP3K7CLP57077 242 aa8.51□□□□□ -1.05
TRAF3-205ENST00000558700 MRPS21P82921 87 aaKnown RBP8.51□□□□□ -1.05
TRAF3-205ENST00000558700 GAD2Q05329 585 aa8.51□□□□□ -1.05
TRAF3-205ENST00000558700 KDSRQ06136 332 aa8.51□□□□□ -1.05
TRAF3-205ENST00000558700 GAB4Q2WGN9 574 aa8.51□□□□□ -1.05
TRAF3-205ENST00000558700 EDRF1Q3B7T1 1238 aa8.51□□□□□ -1.05
TRAF3-205ENST00000558700 ZCWPW2Q504Y3 356 aa8.51□□□□□ -1.05
TRAF3-205ENST00000558700 BTBD8Q5XKL5 378 aa8.51□□□□□ -1.05
TRAF3-205ENST00000558700 PAQR9Q6ZVX9 377 aa8.51□□□□□ -1.05
TRAF3-205ENST00000558700 KBTBD6Q86V97 674 aa8.51□□□□□ -1.05
TRAF3-205ENST00000558700 CRYBG2Q8N1P7 616 aa8.51□□□□□ -1.05
TRAF3-205ENST00000558700 TTC39CQ8N584 583 aa8.51□□□□□ -1.05
TRAF3-205ENST00000558700 ZMIZ2Q8NF64 920 aa8.51□□□□□ -1.05
TRAF3-205ENST00000558700 SCAMP5Q8TAC9 235 aa8.51□□□□□ -1.05
TRAF3-205ENST00000558700 DDX1Q92499 740 aaKnown RBP8.51□□□□□ -1.05
TRAF3-205ENST00000558700 JAKMIP2Q96AA8 810 aa8.51□□□□□ -1.05
TRAF3-205ENST00000558700 ELMO3Q96BJ8 720 aa8.51□□□□□ -1.05
TRAF3-205ENST00000558700 CHAMP1Q96JM3 812 aa8.51□□□□□ -1.05
TRAF3-205ENST00000558700 ZC3H10Q96K80 434 aaKnown RBP8.51□□□□□ -1.05
TRAF3-205ENST00000558700 CNOT6LQ96LI5 555 aaKnown RBP8.51□□□□□ -1.05
TRAF3-205ENST00000558700 PNKPQ96T60 521 aa8.51□□□□□ -1.05
TRAF3-205ENST00000558700 SMOQ99835 787 aa8.51□□□□□ -1.05
TRAF3-205ENST00000558700 NT5C1AQ9BXI3 368 aa8.51□□□□□ -1.05
TRAF3-205ENST00000558700 C1QTNF2Q9BXJ5 285 aa8.51□□□□□ -1.05
TRAF3-205ENST00000558700 GOLPH3LQ9H4A5 285 aa8.51□□□□□ -1.05
TRAF3-205ENST00000558700 CCSER2Q9H7U1 834 aa8.51□□□□□ -1.05
TRAF3-205ENST00000558700 MMRN2Q9H8L6 949 aa8.51□□□□□ -1.05
TRAF3-205ENST00000558700 TMEM8AQ9HCN3 771 aa8.51□□□□□ -1.05
TRAF3-205ENST00000558700 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.51□□□□□ -1.05
TRAF3-205ENST00000558700 ARHGEF4Q9NR80 690 aa8.51□□□□□ -1.05
TRAF3-205ENST00000558700 TLR8Q9NR97 1041 aaKnown RBP8.51□□□□□ -1.05
TRAF3-205ENST00000558700 RMND1Q9NWS8 449 aa8.51□□□□□ -1.05
TRAF3-205ENST00000558700 IL37Q9NZH6 218 aa8.51□□□□□ -1.05
TRAF3-205ENST00000558700 SEPT3Q9UH03 358 aa8.51□□□□□ -1.05
TRAF3-205ENST00000558700 EBF1Q9UH73 591 aa8.51□□□□□ -1.05
TRAF3-205ENST00000558700 LSM7Q9UK45 103 aaKnown RBP8.51□□□□□ -1.05
TRAF3-205ENST00000558700 FCF1Q9Y324 198 aaKnown RBP8.51□□□□□ -1.05
TRAF3-205ENST00000558700 ZDHHC9Q9Y397 364 aa8.51□□□□□ -1.05
TRAF3-205ENST00000558700 PCDHA5Q9Y5H7 936 aa8.51□□□□□ -1.05
TRAF3-205ENST00000558700 DNMT3AQ9Y6K1 912 aaPredicted RBP8.51□□□□□ -1.05
TRAF3-205ENST00000558700 K7EQS6 105 aa8.5□□□□□ -1.05
TRAF3-205ENST00000558700 CYP26A1O43174 497 aa8.5□□□□□ -1.05
TRAF3-205ENST00000558700 HOXC11O43248 304 aaPredicted RBP8.5□□□□□ -1.05
TRAF3-205ENST00000558700 ZNF202O95125 648 aa8.5□□□□□ -1.05
TRAF3-205ENST00000558700 KAT7O95251 611 aa8.5□□□□□ -1.05
TRAF3-205ENST00000558700 ZNF806P0C7X5 589 aa8.5□□□□□ -1.05
TRAF3-205ENST00000558700 IRF1P10914 325 aa8.5□□□□□ -1.05
TRAF3-205ENST00000558700 CD58P19256 250 aa8.5□□□□□ -1.05
TRAF3-205ENST00000558700 HOXC13P31276 330 aa8.5□□□□□ -1.05
TRAF3-205ENST00000558700 GBP1P32455 592 aa8.5□□□□□ -1.05
TRAF3-205ENST00000558700 GTF2H1P32780 548 aa8.5□□□□□ -1.05
TRAF3-205ENST00000558700 GRIA2P42262 883 aa8.5□□□□□ -1.05
TRAF3-205ENST00000558700 LIMK1P53667 647 aa8.5□□□□□ -1.05
TRAF3-205ENST00000558700 PPP3CAQ08209 521 aa8.5□□□□□ -1.05
TRAF3-205ENST00000558700 ADAM9Q13443 819 aa8.5□□□□□ -1.05
TRAF3-205ENST00000558700 BECN1Q14457 450 aa8.5□□□□□ -1.05
TRAF3-205ENST00000558700 PLK5Q496M5 336 aa8.5□□□□□ -1.05
TRAF3-205ENST00000558700 USP39Q53GS9 565 aaKnown RBP8.5□□□□□ -1.05
TRAF3-205ENST00000558700 C2orf27AQ580R0 203 aa8.5□□□□□ -1.05
TRAF3-205ENST00000558700 C4orf48Q5BLP8 95 aa8.5□□□□□ -1.05
TRAF3-205ENST00000558700 EOGTQ5NDL2 527 aa8.5□□□□□ -1.05
TRAF3-205ENST00000558700 LY6G5CQ5SRR4 150 aa8.5□□□□□ -1.05
TRAF3-205ENST00000558700 C1orf220Q5T0J3 134 aa8.5□□□□□ -1.05
TRAF3-205ENST00000558700 KRT39Q6A163 491 aa8.5□□□□□ -1.05
TRAF3-205ENST00000558700 IL31Q6EBC2 164 aa8.5□□□□□ -1.05
TRAF3-205ENST00000558700 ANO7Q6IWH7 933 aa8.5□□□□□ -1.05
TRAF3-205ENST00000558700 CLEC20AQ6ZU45 233 aa8.5□□□□□ -1.05
TRAF3-205ENST00000558700 RASSF3Q86WH2 238 aa8.5□□□□□ -1.05
TRAF3-205ENST00000558700 C12orf40Q86WS4 652 aa8.5□□□□□ -1.05
TRAF3-205ENST00000558700 ADGRG2Q8IZP9 1017 aa8.5□□□□□ -1.05
TRAF3-205ENST00000558700 TAS1R2Q8TE23 839 aa8.5□□□□□ -1.05
TRAF3-205ENST00000558700 WHAMMQ8TF30 809 aa8.5□□□□□ -1.05
TRAF3-205ENST00000558700 NUP205Q92621 2012 aa8.5□□□□□ -1.05
TRAF3-205ENST00000558700 COL26A1Q96A83 441 aa8.5□□□□□ -1.05
TRAF3-205ENST00000558700 FAXDC2Q96IV6 333 aa8.5□□□□□ -1.05
TRAF3-205ENST00000558700 SPACA7Q96KW9 195 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms