RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 TSG101Q99816 390 aa16.36■□□□□ 0.21
TPM1-211ENST00000558314 ARID3AQ99856 593 aa16.36■□□□□ 0.21
TPM1-211ENST00000558314 DUSP16Q9BY84 665 aa16.36■□□□□ 0.21
TPM1-211ENST00000558314 CYLDQ9NQC7 956 aa16.36■□□□□ 0.21
TPM1-211ENST00000558314 CISHQ9NSE2 258 aa16.36■□□□□ 0.21
TPM1-211ENST00000558314 DNMT3LQ9UJW3 386 aa16.36■□□□□ 0.21
TPM1-211ENST00000558314 PLA2G4AP47712 749 aa16.35■□□□□ 0.21
TPM1-211ENST00000558314 KIF11P52732 1056 aa16.35■□□□□ 0.21
TPM1-211ENST00000558314 LRMPQ12912 555 aa16.35■□□□□ 0.21
TPM1-211ENST00000558314 HSF5Q4G112 596 aaPredicted RBP16.35■□□□□ 0.21
TPM1-211ENST00000558314 PSAPL1Q6NUJ1 521 aa16.35■□□□□ 0.21
TPM1-211ENST00000558314 TOGARAM2Q6ZUX3 1019 aa16.35■□□□□ 0.21
TPM1-211ENST00000558314 RSRC2Q7L4I2 434 aaKnown RBP16.35■□□□□ 0.21
TPM1-211ENST00000558314 TADA2BQ86TJ2 420 aa16.35■□□□□ 0.21
TPM1-211ENST00000558314 PHTF2Q8N3S3 785 aa16.35■□□□□ 0.21
TPM1-211ENST00000558314 TATDN2Q93075 761 aa16.35■□□□□ 0.21
TPM1-211ENST00000558314 ACOX2Q99424 681 aa16.35■□□□□ 0.21
TPM1-211ENST00000558314 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.35■□□□□ 0.213e-7■■■□□ 15.3
TPM1-211ENST00000558314 RAB20Q9NX57 234 aa16.35■□□□□ 0.21
TPM1-211ENST00000558314 WDR35Q9P2L0 1181 aa16.35■□□□□ 0.21
TPM1-211ENST00000558314 RAD54BQ9Y620 910 aa16.35■□□□□ 0.21
TPM1-211ENST00000558314 THADAQ6YHU6 1953 aa16.35■□□□□ 0.21
TPM1-211ENST00000558314 LNP1A1A4G5 178 aa16.34■□□□□ 0.21
TPM1-211ENST00000558314 STX10O60499 249 aa16.34■□□□□ 0.21
TPM1-211ENST00000558314 NTSR1P30989 418 aa16.34■□□□□ 0.21
TPM1-211ENST00000558314 GTF2H1P32780 548 aa16.34■□□□□ 0.21
TPM1-211ENST00000558314 P2RY2P41231 377 aa16.34■□□□□ 0.21
TPM1-211ENST00000558314 PRCPP42785 496 aa16.34■□□□□ 0.21
TPM1-211ENST00000558314 PTGER3P43115 390 aa16.34■□□□□ 0.21
TPM1-211ENST00000558314 MAPK8P45983 427 aa16.34■□□□□ 0.21
TPM1-211ENST00000558314 DGKGP49619 791 aa16.34■□□□□ 0.21
TPM1-211ENST00000558314 BYSLQ13895 437 aaKnown RBP16.34■□□□□ 0.21
TPM1-211ENST00000558314 GOLGA7BQ2TAP0 167 aa16.34■□□□□ 0.21
TPM1-211ENST00000558314 EDRF1Q3B7T1 1238 aa16.34■□□□□ 0.21
TPM1-211ENST00000558314 ZCWPW2Q504Y3 356 aa16.34■□□□□ 0.21
TPM1-211ENST00000558314 ISM2Q6H9L7 571 aa16.34■□□□□ 0.21
TPM1-211ENST00000558314 SCD5Q86SK9 330 aa16.34■□□□□ 0.21
TPM1-211ENST00000558314 TMEM176AQ96HP8 235 aa16.34■□□□□ 0.21
TPM1-211ENST00000558314 RMND1Q9NWS8 449 aa16.34■□□□□ 0.21
TPM1-211ENST00000558314 MBD1Q9UIS9 605 aaPredicted RBP16.34■□□□□ 0.21
TPM1-211ENST00000558314 A0A0A0MRY4 1105 aa16.33■□□□□ 0.2
TPM1-211ENST00000558314 GREM1O60565 184 aa16.33■□□□□ 0.2
TPM1-211ENST00000558314 KCNK5O95279 499 aa16.33■□□□□ 0.2
TPM1-211ENST00000558314 CFIP05156 583 aa16.33■□□□□ 0.2
TPM1-211ENST00000558314 CD19P15391 556 aa16.33■□□□□ 0.2
TPM1-211ENST00000558314 GABRG2P18507 467 aa16.33■□□□□ 0.2
TPM1-211ENST00000558314 NOVA1P51513 510 aaKnown RBP16.33■□□□□ 0.2
TPM1-211ENST00000558314 SLC8A3P57103 927 aa16.33■□□□□ 0.2
TPM1-211ENST00000558314 IRX4P78413 519 aa16.33■□□□□ 0.2
TPM1-211ENST00000558314 RPL6Q02878 288 aaKnown RBP16.33■□□□□ 0.2
TPM1-211ENST00000558314 TRIM61Q5EBN2 209 aa16.33■□□□□ 0.2
TPM1-211ENST00000558314 DAB2IPQ5VWQ8 1189 aa16.33■□□□□ 0.2
TPM1-211ENST00000558314 LYSMD4Q5XG99 296 aa16.33■□□□□ 0.2
TPM1-211ENST00000558314 CCDC186Q7Z3E2 898 aa16.33■□□□□ 0.2
TPM1-211ENST00000558314 SLC4A11Q8NBS3 891 aa16.33■□□□□ 0.2
TPM1-211ENST00000558314 OLIG1Q8TAK6 271 aa16.33■□□□□ 0.2
TPM1-211ENST00000558314 PNPLA8Q9NP80 782 aa16.33■□□□□ 0.2
TPM1-211ENST00000558314 TMEM9BQ9NQ34 198 aa16.33■□□□□ 0.2
TPM1-211ENST00000558314 CACNA2D2Q9NY47 1150 aa16.33■□□□□ 0.2
TPM1-211ENST00000558314 CALCOCO1Q9P1Z2 691 aa16.33■□□□□ 0.2
TPM1-211ENST00000558314 CYP8B1Q9UNU6 501 aa16.33■□□□□ 0.2
TPM1-211ENST00000558314 CNOT1A5YKK6 2376 aaKnown RBP16.33■□□□□ 0.2
TPM1-211ENST00000558314 TPRP12270 2363 aaKnown RBP16.33■□□□□ 0.2
TPM1-211ENST00000558314 SLC12A8A0AV02 714 aa16.32■□□□□ 0.2
TPM1-211ENST00000558314 TRIM49BA6NDI0 452 aa16.32■□□□□ 0.2
TPM1-211ENST00000558314 PRRT4C9JH25 899 aa16.32■□□□□ 0.2
TPM1-211ENST00000558314 GIPC1O14908 333 aa16.32■□□□□ 0.2
TPM1-211ENST00000558314 CACNG3O60359 315 aa16.32■□□□□ 0.2
TPM1-211ENST00000558314 STC2O76061 302 aa16.32■□□□□ 0.2
TPM1-211ENST00000558314 SMC2O95347 1197 aa16.32■□□□□ 0.2
TPM1-211ENST00000558314 CHRM1P11229 460 aaPredicted RBP16.32■□□□□ 0.2
TPM1-211ENST00000558314 CORO1AP31146 461 aaKnown RBP16.32■□□□□ 0.2
TPM1-211ENST00000558314 RAD23BP54727 409 aa16.32■□□□□ 0.2
TPM1-211ENST00000558314 MAP7D1Q3KQU3 841 aa16.32■□□□□ 0.2
TPM1-211ENST00000558314 CBWD6Q4V339 395 aa16.32■□□□□ 0.2
TPM1-211ENST00000558314 CBWD3Q5JTY5 395 aa16.32■□□□□ 0.2
TPM1-211ENST00000558314 CBWD5Q5RIA9 395 aa16.32■□□□□ 0.2
TPM1-211ENST00000558314 ANKRD40Q6AI12 368 aa16.32■□□□□ 0.2
TPM1-211ENST00000558314 KIAA1324Q6UXG2 1013 aaKnown RBP16.32■□□□□ 0.2
TPM1-211ENST00000558314 PIGZQ86VD9 579 aa16.32■□□□□ 0.2
TPM1-211ENST00000558314 NDRG1Q92597 394 aaKnown RBP16.32■□□□□ 0.2
TPM1-211ENST00000558314 SMARCE1Q969G3 411 aa16.32■□□□□ 0.2
TPM1-211ENST00000558314 LSM14BQ9BX40 385 aaKnown RBP16.32■□□□□ 0.2
TPM1-211ENST00000558314 NUSAP1Q9BXS6 441 aaKnown RBP16.32■□□□□ 0.2
TPM1-211ENST00000558314 SLC6A17Q9H1V8 727 aa16.32■□□□□ 0.2
TPM1-211ENST00000558314 FSCN3Q9NQT6 498 aa16.32■□□□□ 0.2
TPM1-211ENST00000558314 ANGPTL2Q9UKU9 493 aa16.32■□□□□ 0.2
TPM1-211ENST00000558314 HCN2Q9UL51 889 aa16.32■□□□□ 0.2
TPM1-211ENST00000558314 STRIP2Q9ULQ0 834 aa16.32■□□□□ 0.2
TPM1-211ENST00000558314 WASH3PC4AMC7 463 aa16.31■□□□□ 0.2
TPM1-211ENST00000558314 TM4SF5O14894 197 aa16.31■□□□□ 0.2
TPM1-211ENST00000558314 ITPKAP23677 461 aa16.31■□□□□ 0.2
TPM1-211ENST00000558314 PSEN1P49768 467 aa16.31■□□□□ 0.2
TPM1-211ENST00000558314 TKTL1P51854 596 aa16.31■□□□□ 0.2
TPM1-211ENST00000558314 PMS1P54277 932 aaKnown RBP16.31■□□□□ 0.2
TPM1-211ENST00000558314 YWHAGP61981 247 aaKnown RBP eCLIP16.31■□□□□ 0.2
TPM1-211ENST00000558314 SH3PXD2AQ5TCZ1 1133 aa16.31■□□□□ 0.2
TPM1-211ENST00000558314 ZNF658Q5TYW1 1059 aaPredicted RBP16.31■□□□□ 0.2
TPM1-211ENST00000558314 KIAA1211LQ6NV74 962 aa16.31■□□□□ 0.2
TPM1-211ENST00000558314 DENND1CQ8IV53 801 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms