RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 SOCS4Q8WXH5 440 aa10.97□□□□□ -0.65
TPM1-210ENST00000558264 TNIP3Q96KP6 325 aa10.97□□□□□ -0.65
TPM1-210ENST00000558264 SENP8Q96LD8 212 aa10.97□□□□□ -0.65
TPM1-210ENST00000558264 PAFAH2Q99487 392 aa10.97□□□□□ -0.65
TPM1-210ENST00000558264 CRTAC1Q9NQ79 661 aa10.97□□□□□ -0.65
TPM1-210ENST00000558264 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.97□□□□□ -0.65
TPM1-210ENST00000558264 GTF2IRD1Q9UHL9 959 aa10.97□□□□□ -0.65
TPM1-210ENST00000558264 MRPL42Q9Y6G3 142 aaKnown RBP10.97□□□□□ -0.65
TPM1-210ENST00000558264 DNM1LO00429 736 aa10.97□□□□□ -0.65
TPM1-210ENST00000558264 NRP1O14786 923 aa10.97□□□□□ -0.65
TPM1-210ENST00000558264 CREB3O43889 395 aa10.97□□□□□ -0.65
TPM1-210ENST00000558264 DESP17661 470 aa10.97□□□□□ -0.65
TPM1-210ENST00000558264 CD52P31358 61 aa10.97□□□□□ -0.65
TPM1-210ENST00000558264 THPOP40225 353 aa10.97□□□□□ -0.65
TPM1-210ENST00000558264 FLT3LGP49771 235 aa10.97□□□□□ -0.65
TPM1-210ENST00000558264 KCNJ11Q14654 390 aa10.97□□□□□ -0.65
TPM1-210ENST00000558264 PCBP1Q15365 356 aaKnown RBP eCLIP10.97□□□□□ -0.65
TPM1-210ENST00000558264 SLC9A4Q6AI14 798 aa10.97□□□□□ -0.65
TPM1-210ENST00000558264 CLEC20AQ6ZU45 233 aa10.97□□□□□ -0.65
TPM1-210ENST00000558264 PACS2Q86VP3 889 aa10.97□□□□□ -0.65
TPM1-210ENST00000558264 TP53INP2Q8IXH6 220 aa10.97□□□□□ -0.65
TPM1-210ENST00000558264 STK32AQ8WU08 396 aa10.97□□□□□ -0.65
TPM1-210ENST00000558264 CSPG4P5Q96PW8 444 aa10.97□□□□□ -0.65
TPM1-210ENST00000558264 C11orf84Q9BUA3 381 aaPredicted RBP10.97□□□□□ -0.65
TPM1-210ENST00000558264 FRMD8P1Q9BZ68 369 aaPredicted RBP10.97□□□□□ -0.65
TPM1-210ENST00000558264 LRRC4Q9HBW1 653 aa10.97□□□□□ -0.65
TPM1-210ENST00000558264 GRID1Q9ULK0 1009 aa10.97□□□□□ -0.65
TPM1-210ENST00000558264 ABT1Q9ULW3 272 aaKnown RBP10.97□□□□□ -0.65
TPM1-210ENST00000558264 INPP5FQ9Y2H2 1132 aa10.97□□□□□ -0.65
TPM1-210ENST00000558264 WDR91A4D1P6 747 aa10.96□□□□□ -0.65
TPM1-210ENST00000558264 FAM47DPA6NHR8 397 aa10.96□□□□□ -0.65
TPM1-210ENST00000558264 F8W810 466 aa10.96□□□□□ -0.65
TPM1-210ENST00000558264 H0YHG0 523 aa10.96□□□□□ -0.65
TPM1-210ENST00000558264 MDM4O15151 490 aa10.96□□□□□ -0.65
TPM1-210ENST00000558264 DUSP11O75319 330 aaKnown RBP10.96□□□□□ -0.65
TPM1-210ENST00000558264 FAM155BO75949 473 aa10.96□□□□□ -0.65
TPM1-210ENST00000558264 METTL18O95568 372 aa10.96□□□□□ -0.65
TPM1-210ENST00000558264 ELNP15502 786 aa10.96□□□□□ -0.65
TPM1-210ENST00000558264 NPR3P17342 541 aa10.96□□□□□ -0.65
TPM1-210ENST00000558264 KRT4P19013 534 aa10.96□□□□□ -0.65
TPM1-210ENST00000558264 CA4P22748 312 aa10.96□□□□□ -0.65
TPM1-210ENST00000558264 STIP1P31948 543 aaKnown RBP10.96□□□□□ -0.65
TPM1-210ENST00000558264 GRIA1P42261 906 aa10.96□□□□□ -0.65
TPM1-210ENST00000558264 GEMIN4P57678 1058 aaKnown RBP10.96□□□□□ -0.65
TPM1-210ENST00000558264 OTUD1Q5VV17 481 aaPredicted RBP10.96□□□□□ -0.65
TPM1-210ENST00000558264 KCNT2Q6UVM3 1135 aa10.96□□□□□ -0.65
TPM1-210ENST00000558264 DSTYKQ6XUX3 929 aa10.96□□□□□ -0.65
TPM1-210ENST00000558264 CEP128Q6ZU80 1094 aa10.96□□□□□ -0.65
TPM1-210ENST00000558264 TEKT4Q8WW24 435 aa10.96□□□□□ -0.65
TPM1-210ENST00000558264 CKAP2Q8WWK9 683 aa10.96□□□□□ -0.65
TPM1-210ENST00000558264 LGMNQ99538 433 aa10.96□□□□□ -0.65
TPM1-210ENST00000558264 ZNF670Q9BS34 389 aa10.96□□□□□ -0.65
TPM1-210ENST00000558264 MTG1Q9BT17 334 aaPredicted RBP10.96□□□□□ -0.65
TPM1-210ENST00000558264 DUSP16Q9BY84 665 aa10.96□□□□□ -0.65
TPM1-210ENST00000558264 ETNK1Q9HBU6 452 aa10.96□□□□□ -0.65
TPM1-210ENST00000558264 ABCF3Q9NUQ8 709 aa10.96□□□□□ -0.65
TPM1-210ENST00000558264 TRPV2Q9Y5S1 764 aa10.96□□□□□ -0.65
TPM1-210ENST00000558264 PDCD11Q14690 1871 aaKnown RBP10.96□□□□□ -0.66
TPM1-210ENST00000558264 ARL5CA6NH57 179 aa10.96□□□□□ -0.66
TPM1-210ENST00000558264 M0QYT0 321 aa10.96□□□□□ -0.66
TPM1-210ENST00000558264 XPO1O14980 1071 aaKnown RBP10.96□□□□□ -0.66
TPM1-210ENST00000558264 MGEA5O60502 916 aa10.96□□□□□ -0.66
TPM1-210ENST00000558264 AMHP03971 560 aa10.96□□□□□ -0.66
TPM1-210ENST00000558264 SLC10A3P09131 477 aa10.96□□□□□ -0.66
TPM1-210ENST00000558264 TGM2P21980 687 aa10.96□□□□□ -0.66
TPM1-210ENST00000558264 WARSP23381 471 aaKnown RBP10.96□□□□□ -0.66
TPM1-210ENST00000558264 HOXC8P31273 242 aa10.96□□□□□ -0.66
TPM1-210ENST00000558264 RDXP35241 583 aaKnown RBP10.96□□□□□ -0.66
TPM1-210ENST00000558264 PTPN9P43378 593 aa10.96□□□□□ -0.66
TPM1-210ENST00000558264 TKTL1P51854 596 aa10.96□□□□□ -0.66
TPM1-210ENST00000558264 PRKCZQ05513 592 aa10.96□□□□□ -0.66
TPM1-210ENST00000558264 DNAJC3Q13217 504 aa10.96□□□□□ -0.66
TPM1-210ENST00000558264 SLC1A5Q15758 541 aa10.96□□□□□ -0.66
TPM1-210ENST00000558264 FAM133BQ5BKY9 247 aaKnown RBP10.96□□□□□ -0.66
TPM1-210ENST00000558264 TAF2Q6P1X5 1199 aa10.96□□□□□ -0.66
TPM1-210ENST00000558264 AGMOQ6ZNB7 445 aa10.96□□□□□ -0.66
TPM1-210ENST00000558264 PIGWQ7Z7B1 504 aa10.96□□□□□ -0.66
TPM1-210ENST00000558264 PRPF39Q86UA1 669 aaKnown RBP10.96□□□□□ -0.66
TPM1-210ENST00000558264 ZDHHC17Q8IUH5 632 aa10.96□□□□□ -0.66
TPM1-210ENST00000558264 SIX6OS1Q8N1H7 587 aa10.96□□□□□ -0.66
TPM1-210ENST00000558264 PPM1EQ8WY54 764 aa10.96□□□□□ -0.66
TPM1-210ENST00000558264 SMC6Q96SB8 1091 aa10.96□□□□□ -0.66
TPM1-210ENST00000558264 FAM124BQ9H5Z6 455 aaPredicted RBP10.96□□□□□ -0.66
TPM1-210ENST00000558264 ALG13Q9NP73 1137 aaKnown RBP10.96□□□□□ -0.66
TPM1-210ENST00000558264 PSMC3IPQ9P2W1 217 aaPredicted RBP10.96□□□□□ -0.66
TPM1-210ENST00000558264 TCRBV9S1A1TA0A576 114 aa10.95□□□□□ -0.66
TPM1-210ENST00000558264 AP1G2O75843 785 aa10.95□□□□□ -0.66
TPM1-210ENST00000558264 THP07101 528 aa10.95□□□□□ -0.66
TPM1-210ENST00000558264 CYBAP13498 195 aa10.95□□□□□ -0.66
TPM1-210ENST00000558264 CCND3P30281 292 aaPredicted RBP10.95□□□□□ -0.66
TPM1-210ENST00000558264 PHBP35232 272 aa10.95□□□□□ -0.66
TPM1-210ENST00000558264 MATKP42679 507 aa10.95□□□□□ -0.66
TPM1-210ENST00000558264 SNX16P57768 344 aa10.95□□□□□ -0.66
TPM1-210ENST00000558264 YWHAZP63104 245 aaKnown RBP10.95□□□□□ -0.66
TPM1-210ENST00000558264 DPYSL2Q16555 572 aa10.95□□□□□ -0.66
TPM1-210ENST00000558264 KBTBD12Q3ZCT8 623 aa10.95□□□□□ -0.66
TPM1-210ENST00000558264 EFHC2Q5JST6 749 aa10.95□□□□□ -0.66
TPM1-210ENST00000558264 NCBP2-AS2Q69YL0 99 aa10.95□□□□□ -0.66
TPM1-210ENST00000558264 ARHGEF18Q6ZSZ5 1173 aa10.95□□□□□ -0.66
TPM1-210ENST00000558264 DENND5BQ6ZUT9 1274 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms