RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 TRIM49BA6NDI0 452 aa10.64□□□□□ -0.71
USP3-207ENST00000558218 K7EQS6 105 aa10.64□□□□□ -0.71
USP3-207ENST00000558218 HOXC11O43248 304 aaPredicted RBP10.64□□□□□ -0.71
USP3-207ENST00000558218 APODP05090 189 aa10.64□□□□□ -0.71
USP3-207ENST00000558218 PAEPP09466 180 aa10.64□□□□□ -0.71
USP3-207ENST00000558218 VDRP11473 427 aa10.64□□□□□ -0.71
USP3-207ENST00000558218 ADH5P11766 374 aa10.64□□□□□ -0.71
USP3-207ENST00000558218 BMP6P22004 513 aa10.64□□□□□ -0.71
USP3-207ENST00000558218 SLC19A1P41440 591 aa10.64□□□□□ -0.71
USP3-207ENST00000558218 GRIA2P42262 883 aa10.64□□□□□ -0.71
USP3-207ENST00000558218 ID4P47928 161 aa10.64□□□□□ -0.71
USP3-207ENST00000558218 COG7P83436 770 aa10.64□□□□□ -0.71
USP3-207ENST00000558218 CCDC40Q4G0X9 1142 aa10.64□□□□□ -0.71
USP3-207ENST00000558218 ZNF394Q53GI3 561 aa10.64□□□□□ -0.71
USP3-207ENST00000558218 RAB41Q5JT25 222 aa10.64□□□□□ -0.71
USP3-207ENST00000558218 BTBD8Q5XKL5 378 aa10.64□□□□□ -0.71
USP3-207ENST00000558218 PM20D1Q6GTS8 502 aa10.64□□□□□ -0.71
USP3-207ENST00000558218 C11orf74Q86VG3 221 aa10.64□□□□□ -0.71
USP3-207ENST00000558218 USP33Q8TEY7 942 aa10.64□□□□□ -0.71
USP3-207ENST00000558218 GAB3Q8WWW8 586 aa10.64□□□□□ -0.71
USP3-207ENST00000558218 NELFBQ8WX92 580 aa10.64□□□□□ -0.71
USP3-207ENST00000558218 ERCC4Q92889 916 aaPredicted RBP10.64□□□□□ -0.71
USP3-207ENST00000558218 ZC3H10Q96K80 434 aaKnown RBP10.64□□□□□ -0.71
USP3-207ENST00000558218 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.64□□□□□ -0.71
USP3-207ENST00000558218 WDR35Q9P2L0 1181 aa10.64□□□□□ -0.71
USP3-207ENST00000558218 LSM7Q9UK45 103 aaKnown RBP10.64□□□□□ -0.71
USP3-207ENST00000558218 GADD45BO75293 160 aaPredicted RBP10.63□□□□□ -0.71
USP3-207ENST00000558218 KAT7O95251 611 aa10.63□□□□□ -0.71
USP3-207ENST00000558218 APBB3O95704 486 aa10.63□□□□□ -0.71
USP3-207ENST00000558218 CCDC192P0DO97 292 aa10.63□□□□□ -0.71
USP3-207ENST00000558218 RARGP13631 454 aa10.63□□□□□ -0.71
USP3-207ENST00000558218 BCAT1P54687 386 aa10.63□□□□□ -0.71
USP3-207ENST00000558218 GCNT1Q02742 428 aa10.63□□□□□ -0.71
USP3-207ENST00000558218 LMNB2Q03252 620 aa10.63□□□□□ -0.71
USP3-207ENST00000558218 PAK1Q13153 545 aa10.63□□□□□ -0.71
USP3-207ENST00000558218 DMC1Q14565 340 aa10.63□□□□□ -0.71
USP3-207ENST00000558218 PUM1Q14671 1186 aaKnown RBP eCLIP10.63□□□□□ -0.71
USP3-207ENST00000558218 STILQ15468 1287 aa10.63□□□□□ -0.71
USP3-207ENST00000558218 SGO2Q562F6 1265 aa10.63□□□□□ -0.71
USP3-207ENST00000558218 LY6G5CQ5SRR4 150 aa10.63□□□□□ -0.71
USP3-207ENST00000558218 ISM2Q6H9L7 571 aa10.63□□□□□ -0.71
USP3-207ENST00000558218 CACNA2D4Q7Z3S7 1137 aa10.63□□□□□ -0.71
USP3-207ENST00000558218 SCD5Q86SK9 330 aa10.63□□□□□ -0.71
USP3-207ENST00000558218 PIGZQ86VD9 579 aa10.63□□□□□ -0.71
USP3-207ENST00000558218 KIAA2013Q8IYS2 634 aa10.63□□□□□ -0.71
USP3-207ENST00000558218 SCML4Q8N228 414 aa10.63□□□□□ -0.71
USP3-207ENST00000558218 DCLK2Q8N568 766 aa10.63□□□□□ -0.71
USP3-207ENST00000558218 UBR7Q8N806 425 aa10.63□□□□□ -0.71
USP3-207ENST00000558218 EHBP1Q8NDI1 1231 aa10.63□□□□□ -0.71
USP3-207ENST00000558218 RPLP0P6Q8NHW5 317 aa10.63□□□□□ -0.71
USP3-207ENST00000558218 KCTD13Q8WZ19 329 aa10.63□□□□□ -0.71
USP3-207ENST00000558218 EZH1Q92800 747 aaPredicted RBP10.63□□□□□ -0.71
USP3-207ENST00000558218 FAM81BQ96LP2 452 aa10.63□□□□□ -0.71
USP3-207ENST00000558218 NT5C1BQ96P26 610 aa10.63□□□□□ -0.71
USP3-207ENST00000558218 DCLK3Q9C098 648 aa10.63□□□□□ -0.71
USP3-207ENST00000558218 NMUR1Q9HB89 426 aa10.63□□□□□ -0.71
USP3-207ENST00000558218 SPHK2Q9NRA0 654 aa10.63□□□□□ -0.71
USP3-207ENST00000558218 C2orf42Q9NWW7 574 aa10.63□□□□□ -0.71
USP3-207ENST00000558218 MARK1Q9P0L2 795 aa10.63□□□□□ -0.71
USP3-207ENST00000558218 DEC1Q9P2X7 70 aa10.63□□□□□ -0.71
USP3-207ENST00000558218 HESX1Q9UBX0 185 aa10.63□□□□□ -0.71
USP3-207ENST00000558218 STARD13Q9Y3M8 1113 aa10.63□□□□□ -0.71
USP3-207ENST00000558218 USP34Q70CQ2 3546 aa10.63□□□□□ -0.71
USP3-207ENST00000558218 ZNF292O60281 2723 aa10.63□□□□□ -0.71
USP3-207ENST00000558218 GPR179Q6PRD1 2367 aa10.62□□□□□ -0.71
USP3-207ENST00000558218 MYOFQ9NZM1 2061 aa10.62□□□□□ -0.71
USP3-207ENST00000558218 A0A1W2PQH9 124 aa10.62□□□□□ -0.71
USP3-207ENST00000558218 XPO1O14980 1071 aaKnown RBP10.62□□□□□ -0.71
USP3-207ENST00000558218 AXIN1O15169 862 aa10.62□□□□□ -0.71
USP3-207ENST00000558218 CYP26A1O43174 497 aa10.62□□□□□ -0.71
USP3-207ENST00000558218 GREM1O60565 184 aa10.62□□□□□ -0.71
USP3-207ENST00000558218 RPP40O75818 363 aaKnown RBP10.62□□□□□ -0.71
USP3-207ENST00000558218 TBX18O95935 607 aa10.62□□□□□ -0.71
USP3-207ENST00000558218 SETSIPP0DME0 302 aa10.62□□□□□ -0.71
USP3-207ENST00000558218 TGM1P22735 817 aa10.62□□□□□ -0.71
USP3-207ENST00000558218 CHKAP35790 457 aa10.62□□□□□ -0.71
USP3-207ENST00000558218 PGFP49763 221 aa10.62□□□□□ -0.71
USP3-207ENST00000558218 DGKEP52429 567 aa10.62□□□□□ -0.71
USP3-207ENST00000558218 DMWDQ09019 674 aa10.62□□□□□ -0.71
USP3-207ENST00000558218 BST2Q10589 180 aaKnown RBP10.62□□□□□ -0.71
USP3-207ENST00000558218 E2F5Q15329 346 aa10.62□□□□□ -0.71
USP3-207ENST00000558218 CNGA2Q16280 664 aa10.62□□□□□ -0.71
USP3-207ENST00000558218 EOGTQ5NDL2 527 aa10.62□□□□□ -0.71
USP3-207ENST00000558218 C10orf120Q5SQS8 335 aa10.62□□□□□ -0.71
USP3-207ENST00000558218 HEATR6Q6AI08 1181 aaKnown RBP10.62□□□□□ -0.71
USP3-207ENST00000558218 KLHL10Q6JEL2 608 aa10.62□□□□□ -0.71
USP3-207ENST00000558218 PKN3Q6P5Z2 889 aa10.62□□□□□ -0.71
USP3-207ENST00000558218 LCLAT1Q6UWP7 414 aa10.62□□□□□ -0.71
USP3-207ENST00000558218 PRR23BQ6ZRT6 265 aa10.62□□□□□ -0.71
USP3-207ENST00000558218 CEP68Q76N32 757 aa10.62□□□□□ -0.71
USP3-207ENST00000558218 GPRIN1Q7Z2K8 1008 aa10.62□□□□□ -0.71
USP3-207ENST00000558218 TRMT11Q7Z4G4 463 aaKnown RBP10.62□□□□□ -0.71
USP3-207ENST00000558218 RASSF3Q86WH2 238 aa10.62□□□□□ -0.71
USP3-207ENST00000558218 TRIM59Q8IWR1 403 aa10.62□□□□□ -0.71
USP3-207ENST00000558218 BBS7Q8IWZ6 715 aa10.62□□□□□ -0.71
USP3-207ENST00000558218 ETFBKMTQ8IXQ9 262 aa10.62□□□□□ -0.71
USP3-207ENST00000558218 MLKLQ8NB16 471 aa10.62□□□□□ -0.71
USP3-207ENST00000558218 LMO3Q8TAP4 145 aa10.62□□□□□ -0.71
USP3-207ENST00000558218 XPO6Q96QU8 1125 aaKnown RBP10.62□□□□□ -0.71
USP3-207ENST00000558218 ARID3AQ99856 593 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms