RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 POSTNQ15063 836 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 FAM110CQ1W6H9 321 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 ARHGAP15Q53QZ3 475 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 CCDC174Q6PII3 467 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 KCNV1Q6PIU1 500 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 SLC30A10Q6XR72 485 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 PTCHD4Q6ZW05 846 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 Q6ZWC4 215 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 LDLRAD3Q86YD5 345 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 NGDNQ8NEJ9 315 aaKnown RBP1.98□□□□□ -2.09
HIF1A-212ENST00000557538 SLC30A5Q8TAD4 765 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 WIPF2Q8TF74 440 aaPredicted RBP1.98□□□□□ -2.09
HIF1A-212ENST00000557538 GLG1Q92896 1179 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 MUL1Q969V5 352 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 PRPF18Q99633 342 aaKnown RBP1.98□□□□□ -2.09
HIF1A-212ENST00000557538 ACTRT3Q9BYD9 372 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 TTYH3Q9C0H2 523 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 DDX24Q9GZR7 859 aaKnown RBP eCLIP1.98□□□□□ -2.09
HIF1A-212ENST00000557538 CHMP4BQ9H444 224 aaKnown RBP1.98□□□□□ -2.09
HIF1A-212ENST00000557538 GBA2Q9HCG7 927 aaPredicted RBP1.98□□□□□ -2.09
HIF1A-212ENST00000557538 DUSP22Q9NRW4 184 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 HDAC9Q9UKV0 1011 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 YY2O15391 372 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 NCAM2O15394 837 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 PEX1O43933 1283 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 TSPAN3O60637 253 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 WNT1P04628 370 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 IL6RP08887 468 aaPredicted RBP1.98□□□□□ -2.09
HIF1A-212ENST00000557538 KRT4P19013 534 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 PROZP22891 400 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 MCM5P33992 734 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 ITGA8P53708 1063 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 TPTEP56180 551 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 RBM6P78332 1123 aaKnown RBP1.98□□□□□ -2.09
HIF1A-212ENST00000557538 LSM12Q3MHD2 195 aaKnown RBP1.98□□□□□ -2.09
HIF1A-212ENST00000557538 CD300EQ496F6 205 aaPredicted RBP1.98□□□□□ -2.09
HIF1A-212ENST00000557538 ATPAF1Q5TC12 328 aaPredicted RBP1.98□□□□□ -2.09
HIF1A-212ENST00000557538 JMJD6Q6NYC1 403 aaPredicted RBP1.98□□□□□ -2.09
HIF1A-212ENST00000557538 ZNF804AQ7Z570 1209 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 PRIMA1Q86XR5 153 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 STYXQ8WUJ0 223 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 TMEM125Q96AQ2 219 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 KTI12Q96EK9 354 aaPredicted RBP1.98□□□□□ -2.09
HIF1A-212ENST00000557538 SNX18Q96RF0 628 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 TWNKQ96RR1 684 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 AIFM2Q9BRQ8 373 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 MLXIPQ9HAP2 919 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 FSCN3Q9NQT6 498 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 GJB4Q9NTQ9 266 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 KIF17Q9P2E2 1029 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 MAP3K2Q9Y2U5 619 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 UBE2J1Q9Y385 318 aaPredicted RBP1.98□□□□□ -2.09
HIF1A-212ENST00000557538 LMTK3Q96Q04 1460 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 VWC2LB2RUY7 222 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 PRRG2O14669 202 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 HNRNPRO43390 633 aaKnown RBP1.98□□□□□ -2.09
HIF1A-212ENST00000557538 TMPRSS11DO60235 418 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 SRGAP2O75044 1071 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 LATS1O95835 1130 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 TNNT1P13805 278 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 JUPP14923 745 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 RENBPP51606 427 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 EIF4A1P60842 406 aaKnown RBP1.98□□□□□ -2.09
HIF1A-212ENST00000557538 DPTQ07507 201 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 TMEM88Q6PEY1 159 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 DBX2Q6ZNG2 339 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 BRINP3Q76B58 766 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 KCTD20Q7Z5Y7 419 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 GRASPQ7Z6J2 395 aaPredicted RBP1.98□□□□□ -2.09
HIF1A-212ENST00000557538 PRRT2Q7Z6L0 340 aaPredicted RBP1.98□□□□□ -2.09
HIF1A-212ENST00000557538 B3GALNT2Q8NCR0 500 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 NSUN7Q8NE18 718 aaKnown RBP1.98□□□□□ -2.09
HIF1A-212ENST00000557538 OR1N1Q8NGS0 311 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 RAPGEF4Q8WZA2 1011 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 Q96MF0 132 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 UROC1Q96N76 676 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 GLOD4Q9HC38 313 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 SEMA4GQ9NTN9 838 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 SAGE1Q9NXZ1 904 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 SLC17A6Q9P2U8 582 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 LPAR3Q9UBY5 353 aa1.98□□□□□ -2.09
HIF1A-212ENST00000557538 SCAF8Q9UPN6 1271 aaKnown RBP1.98□□□□□ -2.09
HIF1A-212ENST00000557538 LAS1LQ9Y4W2 734 aaKnown RBP1.98□□□□□ -2.09
HIF1A-212ENST00000557538 hCG_1984214I3L0E3 225 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 IPO5O00410 1097 aaKnown RBP1.97□□□□□ -2.09
HIF1A-212ENST00000557538 CYR61O00622 381 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 ZNF213O14771 459 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 FAM20BO75063 409 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 TAF5LO75529 589 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 ACTL6BO94805 426 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 ZFXP17010 805 aaPredicted RBP1.97□□□□□ -2.09
HIF1A-212ENST00000557538 MRPS35P82673 323 aaKnown RBP1.97□□□□□ -2.09
HIF1A-212ENST00000557538 COL10A1Q03692 680 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 ABHD18Q0P651 414 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 PRKG1Q13976 671 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 CSHL1Q14406 222 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 CYP1B1Q16678 543 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 AAK1Q2M2I8 961 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 CCDC96Q2M329 555 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 ERCC6LQ2NKX8 1250 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms