RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 HHLA1C9JL84 531 aa8.74□□□□□ -1.01
PSEN1-223ENST00000557511 RNF225M0QZC1 329 aaPredicted RBP8.74□□□□□ -1.01
PSEN1-223ENST00000557511 COCHO43405 550 aa8.74□□□□□ -1.01
PSEN1-223ENST00000557511 ADH1CP00326 375 aa8.74□□□□□ -1.01
PSEN1-223ENST00000557511 PDGFBP01127 241 aaPredicted RBP8.74□□□□□ -1.01
PSEN1-223ENST00000557511 TPM3P06753 285 aa8.74□□□□□ -1.01
PSEN1-223ENST00000557511 ZDHHC11BP0C7U3 371 aa8.74□□□□□ -1.01
PSEN1-223ENST00000557511 CCDC172P0C7W6 258 aa8.74□□□□□ -1.01
PSEN1-223ENST00000557511 IRF1P10914 325 aa8.74□□□□□ -1.01
PSEN1-223ENST00000557511 RGS7P49802 495 aa8.74□□□□□ -1.01
PSEN1-223ENST00000557511 ZNF132P52740 706 aa8.74□□□□□ -1.01
PSEN1-223ENST00000557511 YWHAGP61981 247 aaKnown RBP eCLIP8.74□□□□□ -1.01
PSEN1-223ENST00000557511 COG7P83436 770 aa8.74□□□□□ -1.01
PSEN1-223ENST00000557511 ADIGQ0VDE8 80 aa8.74□□□□□ -1.01
PSEN1-223ENST00000557511 GRSF1Q12849 480 aaKnown RBP eCLIP8.74□□□□□ -1.01
PSEN1-223ENST00000557511 USP4Q13107 963 aa8.74□□□□□ -1.01
PSEN1-223ENST00000557511 PPP2R5DQ14738 602 aa8.74□□□□□ -1.01
PSEN1-223ENST00000557511 ZNF77Q15935 545 aa8.74□□□□□ -1.01
PSEN1-223ENST00000557511 LINC01559Q495D7 138 aa8.74□□□□□ -1.01
PSEN1-223ENST00000557511 PREPLQ4J6C6 727 aaPredicted RBP8.74□□□□□ -1.01
PSEN1-223ENST00000557511 MIIPQ5JXC2 388 aa8.74□□□□□ -1.01
PSEN1-223ENST00000557511 KLHDC7AQ5VTJ3 777 aa8.74□□□□□ -1.01
PSEN1-223ENST00000557511 GJB7Q6PEY0 223 aa8.74□□□□□ -1.01
PSEN1-223ENST00000557511 KLHDC10Q6PID8 442 aa8.74□□□□□ -1.01
PSEN1-223ENST00000557511 GPRIN1Q7Z2K8 1008 aa8.74□□□□□ -1.01
PSEN1-223ENST00000557511 CACNA2D4Q7Z3S7 1137 aa8.74□□□□□ -1.01
PSEN1-223ENST00000557511 TTC30AQ86WT1 665 aa8.74□□□□□ -1.01
PSEN1-223ENST00000557511 TTC8Q8TAM2 541 aa8.74□□□□□ -1.01
PSEN1-223ENST00000557511 IPO4Q8TEX9 1081 aaKnown RBP8.74□□□□□ -1.01
PSEN1-223ENST00000557511 ZNF606Q8WXB4 792 aa8.74□□□□□ -1.01
PSEN1-223ENST00000557511 KCTD13Q8WZ19 329 aa8.74□□□□□ -1.01
PSEN1-223ENST00000557511 IRGQQ8WZA9 623 aa8.74□□□□□ -1.01
PSEN1-223ENST00000557511 SHC3Q92529 594 aa8.74□□□□□ -1.01
PSEN1-223ENST00000557511 BAP1Q92560 729 aa8.74□□□□□ -1.01
PSEN1-223ENST00000557511 OTUB2Q96DC9 234 aa8.74□□□□□ -1.01
PSEN1-223ENST00000557511 RSPRY1Q96DX4 576 aa8.74□□□□□ -1.01
PSEN1-223ENST00000557511 ZFYVE19Q96K21 471 aa8.74□□□□□ -1.01
PSEN1-223ENST00000557511 OSBPL6Q9BZF3 934 aa8.74□□□□□ -1.01
PSEN1-223ENST00000557511 ULBP1Q9BZM6 244 aa8.74□□□□□ -1.01
PSEN1-223ENST00000557511 DCLK3Q9C098 648 aa8.74□□□□□ -1.01
PSEN1-223ENST00000557511 MIS12Q9H081 205 aa8.74□□□□□ -1.01
PSEN1-223ENST00000557511 EBF3Q9H4W6 596 aa8.74□□□□□ -1.01
PSEN1-223ENST00000557511 CCSER2Q9H7U1 834 aa8.74□□□□□ -1.01
PSEN1-223ENST00000557511 LTB4R2Q9NPC1 389 aa8.74□□□□□ -1.01
PSEN1-223ENST00000557511 PLCB1Q9NQ66 1216 aa8.74□□□□□ -1.01
PSEN1-223ENST00000557511 CYLDQ9NQC7 956 aa8.74□□□□□ -1.01
PSEN1-223ENST00000557511 CNGB3Q9NQW8 809 aa8.74□□□□□ -1.01
PSEN1-223ENST00000557511 CFAP97Q9P2B7 532 aa8.74□□□□□ -1.01
PSEN1-223ENST00000557511 MAP10Q9P2G4 905 aa8.74□□□□□ -1.01
PSEN1-223ENST00000557511 RASAL2Q9UJF2 1139 aa8.74□□□□□ -1.01
PSEN1-223ENST00000557511 NDRG2Q9UN36 371 aaKnown RBP8.74□□□□□ -1.01
PSEN1-223ENST00000557511 CNTN6Q9UQ52 1028 aa8.74□□□□□ -1.01
PSEN1-223ENST00000557511 CCL26Q9Y258 94 aa8.74□□□□□ -1.01
PSEN1-223ENST00000557511 ZNF510Q9Y2H8 683 aa8.74□□□□□ -1.01
PSEN1-223ENST00000557511 USP3Q9Y6I4 520 aa8.74□□□□□ -1.01
PSEN1-223ENST00000557511 SPECC1L-ADORA2AF8WAN1 911 aa8.73□□□□□ -1.01
PSEN1-223ENST00000557511 FOXN3O00409 490 aaPredicted RBP8.73□□□□□ -1.01
PSEN1-223ENST00000557511 CAPN9O14815 690 aa8.73□□□□□ -1.01
PSEN1-223ENST00000557511 OLFM2O95897 454 aa8.73□□□□□ -1.01
PSEN1-223ENST00000557511 UCHL3P15374 230 aa8.73□□□□□ -1.01
PSEN1-223ENST00000557511 STAT1P42224 750 aa8.73□□□□□ -1.01
PSEN1-223ENST00000557511 POLR2FP61218 127 aaKnown RBP8.73□□□□□ -1.01
PSEN1-223ENST00000557511 EFEMP1Q12805 493 aa8.73□□□□□ -1.01
PSEN1-223ENST00000557511 DRAP1Q14919 205 aaPredicted RBP8.73□□□□□ -1.01
PSEN1-223ENST00000557511 PKDCCQ504Y2 493 aa8.73□□□□□ -1.01
PSEN1-223ENST00000557511 RAB41Q5JT25 222 aa8.73□□□□□ -1.01
PSEN1-223ENST00000557511 DGKKQ5KSL6 1271 aa8.73□□□□□ -1.01
PSEN1-223ENST00000557511 MIB1Q86YT6 1006 aa8.73□□□□□ -1.01
PSEN1-223ENST00000557511 PJA1Q8NG27 643 aa8.73□□□□□ -1.01
PSEN1-223ENST00000557511 STK32AQ8WU08 396 aa8.73□□□□□ -1.01
PSEN1-223ENST00000557511 SLC35F5Q8WV83 523 aa8.73□□□□□ -1.01
PSEN1-223ENST00000557511 TFAP2BQ92481 460 aa8.73□□□□□ -1.01
PSEN1-223ENST00000557511 FAM149B1Q96BN6 582 aa8.73□□□□□ -1.01
PSEN1-223ENST00000557511 SLC22A12Q96S37 553 aa8.73□□□□□ -1.01
PSEN1-223ENST00000557511 IER2Q9BTL4 223 aa8.73□□□□□ -1.01
PSEN1-223ENST00000557511 STK33Q9BYT3 514 aa8.73□□□□□ -1.01
PSEN1-223ENST00000557511 RNF38Q9H0F5 515 aa8.73□□□□□ -1.01
PSEN1-223ENST00000557511 ECT2Q9H8V3 914 aa8.73□□□□□ -1.01
PSEN1-223ENST00000557511 ABCC13Q9NSE7 274 aa8.73□□□□□ -1.01
PSEN1-223ENST00000557511 FAM207AQ9NSI2 230 aaPredicted RBP8.73□□□□□ -1.01
PSEN1-223ENST00000557511 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.73□□□□□ -1.01
PSEN1-223ENST00000557511 GTSE1Q9NYZ3 720 aa8.73□□□□□ -1.01
PSEN1-223ENST00000557511 WNT6Q9Y6F9 365 aa8.73□□□□□ -1.01
PSEN1-223ENST00000557511 SLC12A8A0AV02 714 aa8.72□□□□□ -1.01
PSEN1-223ENST00000557511 LRRC10BA6NIK2 292 aa8.72□□□□□ -1.01
PSEN1-223ENST00000557511 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.72□□□□□ -1.01
PSEN1-223ENST00000557511 TULP2O00295 520 aa8.72□□□□□ -1.01
PSEN1-223ENST00000557511 LAMTOR5O43504 91 aa8.72□□□□□ -1.01
PSEN1-223ENST00000557511 CYBBP04839 570 aa8.72□□□□□ -1.01
PSEN1-223ENST00000557511 DCNP07585 359 aaKnown RBP8.72□□□□□ -1.01
PSEN1-223ENST00000557511 CD72P21854 359 aa8.72□□□□□ -1.01
PSEN1-223ENST00000557511 HARS2P49590 506 aaKnown RBP8.72□□□□□ -1.01
PSEN1-223ENST00000557511 VCPP55072 806 aaKnown RBP8.72□□□□□ -1.01
PSEN1-223ENST00000557511 GAD2Q05329 585 aa8.72□□□□□ -1.01
PSEN1-223ENST00000557511 TNK2Q07912 1038 aa8.72□□□□□ -1.01
PSEN1-223ENST00000557511 KCNMA1Q12791 1236 aa8.72□□□□□ -1.01
PSEN1-223ENST00000557511 AGERQ15109 404 aa8.72□□□□□ -1.01
PSEN1-223ENST00000557511 ZSCAN23Q3MJ62 389 aa8.72□□□□□ -1.01
PSEN1-223ENST00000557511 BSPRYQ5W0U4 402 aa8.72□□□□□ -1.01
PSEN1-223ENST00000557511 CWF19L1Q69YN2 538 aaKnown RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms