RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 GTF2BQ00403 316 aa6.25□□□□□ -1.41
VPS33B-207ENST00000557470 KDSRQ06136 332 aa6.25□□□□□ -1.41
VPS33B-207ENST00000557470 GFPT1Q06210 699 aaPredicted RBP6.25□□□□□ -1.41
VPS33B-207ENST00000557470 SCAPQ12770 1279 aa6.25□□□□□ -1.41
VPS33B-207ENST00000557470 POU4F2Q12837 409 aa6.25□□□□□ -1.41
VPS33B-207ENST00000557470 DHX8Q14562 1220 aaKnown RBP6.25□□□□□ -1.41
VPS33B-207ENST00000557470 DHCR24Q15392 516 aa6.25□□□□□ -1.41
VPS33B-207ENST00000557470 CFAP221Q4G0U5 840 aa6.25□□□□□ -1.41
VPS33B-207ENST00000557470 SPDYCQ5MJ68 293 aa6.25□□□□□ -1.41
VPS33B-207ENST00000557470 EMC10Q5UCC4 262 aa6.25□□□□□ -1.41
VPS33B-207ENST00000557470 LMBRD2Q68DH5 695 aaPredicted RBP6.25□□□□□ -1.41
VPS33B-207ENST00000557470 RAB44Q7Z6P3 723 aaPredicted RBP6.25□□□□□ -1.41
VPS33B-207ENST00000557470 PDZD3Q86UT5 571 aa6.25□□□□□ -1.41
VPS33B-207ENST00000557470 OSTM1Q86WC4 334 aa6.25□□□□□ -1.41
VPS33B-207ENST00000557470 C12orf40Q86WS4 652 aa6.25□□□□□ -1.41
VPS33B-207ENST00000557470 SCN4BQ8IWT1 228 aa6.25□□□□□ -1.41
VPS33B-207ENST00000557470 HDDC3Q8N4P3 179 aa6.25□□□□□ -1.41
VPS33B-207ENST00000557470 MINDY1Q8N5J2 469 aa6.25□□□□□ -1.41
VPS33B-207ENST00000557470 DEFB119Q8N690 84 aa6.25□□□□□ -1.41
VPS33B-207ENST00000557470 C1orf127Q8N9H9 656 aa6.25□□□□□ -1.41
VPS33B-207ENST00000557470 FSIP1Q8NA03 581 aa6.25□□□□□ -1.41
VPS33B-207ENST00000557470 FAM184AQ8NB25 1140 aa6.25□□□□□ -1.41
VPS33B-207ENST00000557470 OR2I1PQ8NGU4 316 aa6.25□□□□□ -1.41
VPS33B-207ENST00000557470 SPATA18Q8TC71 538 aa6.25□□□□□ -1.41
VPS33B-207ENST00000557470 FAM84AQ96KN4 292 aa6.25□□□□□ -1.41
VPS33B-207ENST00000557470 SRA1Q9HD15 236 aaKnown RBP6.25□□□□□ -1.41
VPS33B-207ENST00000557470 DDX43Q9NXZ2 648 aaKnown RBP6.25□□□□□ -1.41
VPS33B-207ENST00000557470 AGO2Q9UKV8 859 aaKnown RBP6.25□□□□□ -1.41
VPS33B-207ENST00000557470 SLC6A14Q9UN76 642 aa6.25□□□□□ -1.41
VPS33B-207ENST00000557470 LIMCH1Q9UPQ0 1083 aa6.25□□□□□ -1.41
VPS33B-207ENST00000557470 STYXL1Q9Y6J8 313 aa6.25□□□□□ -1.41
VPS33B-207ENST00000557470 KALRNO60229 2985 aa6.25□□□□□ -1.41
VPS33B-207ENST00000557470 ACACAQ13085 2346 aa6.25□□□□□ -1.41
VPS33B-207ENST00000557470 TCHHQ07283 1943 aa6.25□□□□□ -1.41
VPS33B-207ENST00000557470 PCDH15Q96QU1 1955 aa6.24□□□□□ -1.41
VPS33B-207ENST00000557470 MYMKA6NI61 221 aa6.24□□□□□ -1.41
VPS33B-207ENST00000557470 GABRDO14764 452 aa6.24□□□□□ -1.41
VPS33B-207ENST00000557470 AP5Z1O43299 807 aa6.24□□□□□ -1.41
VPS33B-207ENST00000557470 HUS1O60921 280 aa6.24□□□□□ -1.41
VPS33B-207ENST00000557470 ATP2C2O75185 946 aa6.24□□□□□ -1.41
VPS33B-207ENST00000557470 TBCAO75347 108 aaKnown RBP6.24□□□□□ -1.41
VPS33B-207ENST00000557470 IL18RAPO95256 599 aa6.24□□□□□ -1.41
VPS33B-207ENST00000557470 APODP05090 189 aa6.24□□□□□ -1.41
VPS33B-207ENST00000557470 ITGB3P05106 788 aa6.24□□□□□ -1.41
VPS33B-207ENST00000557470 KRT18P05783 430 aaKnown RBP6.24□□□□□ -1.41
VPS33B-207ENST00000557470 SERPINF2P08697 491 aa6.24□□□□□ -1.41
VPS33B-207ENST00000557470 PLCG1P19174 1290 aa6.24□□□□□ -1.41
VPS33B-207ENST00000557470 GPC1P35052 558 aa6.24□□□□□ -1.41
VPS33B-207ENST00000557470 RDXP35241 583 aaKnown RBP6.24□□□□□ -1.41
VPS33B-207ENST00000557470 EIF2DP41214 584 aaKnown RBP6.24□□□□□ -1.41
VPS33B-207ENST00000557470 GRIA2P42262 883 aa6.24□□□□□ -1.41
VPS33B-207ENST00000557470 DPP6P42658 865 aa6.24□□□□□ -1.41
VPS33B-207ENST00000557470 MAGEA11P43364 429 aa6.24□□□□□ -1.41
VPS33B-207ENST00000557470 PDE6CP51160 858 aa6.24□□□□□ -1.41
VPS33B-207ENST00000557470 PSMC1P62191 440 aaKnown RBP6.24□□□□□ -1.41
VPS33B-207ENST00000557470 SLC7A9P82251 487 aa6.24□□□□□ -1.41
VPS33B-207ENST00000557470 MYL7Q01449 175 aa6.24□□□□□ -1.41
VPS33B-207ENST00000557470 POU5F1Q01860 360 aaKnown RBP6.24□□□□□ -1.41
VPS33B-207ENST00000557470 RPL6Q02878 288 aaKnown RBP6.24□□□□□ -1.41
VPS33B-207ENST00000557470 RESTQ13127 1097 aa6.24□□□□□ -1.41
VPS33B-207ENST00000557470 CLN3Q13286 438 aa6.24□□□□□ -1.41
VPS33B-207ENST00000557470 BYSLQ13895 437 aaKnown RBP6.24□□□□□ -1.41
VPS33B-207ENST00000557470 DUOXA1Q1HG43 343 aa6.24□□□□□ -1.41
VPS33B-207ENST00000557470 ZNF423Q2M1K9 1284 aa6.24□□□□□ -1.41
VPS33B-207ENST00000557470 COL28A1Q2UY09 1125 aa6.24□□□□□ -1.41
VPS33B-207ENST00000557470 HSF5Q4G112 596 aaPredicted RBP6.24□□□□□ -1.41
VPS33B-207ENST00000557470 C4orf46Q504U0 113 aa6.24□□□□□ -1.41
VPS33B-207ENST00000557470 OXLD1Q5BKU9 147 aa6.24□□□□□ -1.41
VPS33B-207ENST00000557470 EOGTQ5NDL2 527 aa6.24□□□□□ -1.41
VPS33B-207ENST00000557470 SLFN12LQ6IEE8 588 aa6.24□□□□□ -1.41
VPS33B-207ENST00000557470 RHBDF2Q6PJF5 856 aa6.24□□□□□ -1.41
VPS33B-207ENST00000557470 HS2ST1Q7LGA3 356 aa6.24□□□□□ -1.41
VPS33B-207ENST00000557470 SPATA2LQ8IUW3 424 aaPredicted RBP6.24□□□□□ -1.41
VPS33B-207ENST00000557470 ADGRF2Q8IZF7 708 aa6.24□□□□□ -1.41
VPS33B-207ENST00000557470 ADGRG2Q8IZP9 1017 aa6.24□□□□□ -1.41
VPS33B-207ENST00000557470 TMEM86AQ8N2M4 240 aa6.24□□□□□ -1.41
VPS33B-207ENST00000557470 PGBD3Q8N328 593 aa6.24□□□□□ -1.41
VPS33B-207ENST00000557470 ZSWIM2Q8NEG5 633 aa6.24□□□□□ -1.41
VPS33B-207ENST00000557470 CEP76Q8TAP6 659 aa6.24□□□□□ -1.41
VPS33B-207ENST00000557470 CXorf38Q8TB03 319 aa6.24□□□□□ -1.41
VPS33B-207ENST00000557470 POMGNT1Q8WZA1 660 aa6.24□□□□□ -1.41
VPS33B-207ENST00000557470 MYLPFQ96A32 169 aa6.24□□□□□ -1.41
VPS33B-207ENST00000557470 FUBP3Q96I24 572 aaKnown RBP eCLIP6.24□□□□□ -1.41
VPS33B-207ENST00000557470 CAMK1GQ96NX5 476 aa6.24□□□□□ -1.41
VPS33B-207ENST00000557470 SRPK1Q96SB4 655 aaKnown RBP6.24□□□□□ -1.41
VPS33B-207ENST00000557470 PNKPQ96T60 521 aa6.24□□□□□ -1.41
VPS33B-207ENST00000557470 GRIP2Q9C0E4 1043 aa6.24□□□□□ -1.41
VPS33B-207ENST00000557470 RNF38Q9H0F5 515 aa6.24□□□□□ -1.41
VPS33B-207ENST00000557470 ZHX3Q9H4I2 956 aa6.24□□□□□ -1.41
VPS33B-207ENST00000557470 ARHGEF4Q9NR80 690 aa6.24□□□□□ -1.41
VPS33B-207ENST00000557470 BLOC1S4Q9NUP1 217 aa6.24□□□□□ -1.41
VPS33B-207ENST00000557470 SMPD4Q9NXE4 827 aa6.24□□□□□ -1.41
VPS33B-207ENST00000557470 GDAP2Q9NXN4 497 aa6.24□□□□□ -1.41
VPS33B-207ENST00000557470 TRPM5Q9NZQ8 1165 aa6.24□□□□□ -1.41
VPS33B-207ENST00000557470 SIRPGQ9P1W8 387 aa6.24□□□□□ -1.41
VPS33B-207ENST00000557470 SIX4Q9UIU6 781 aa6.24□□□□□ -1.41
VPS33B-207ENST00000557470 AGAP1Q9UPQ3 857 aa6.24□□□□□ -1.41
VPS33B-207ENST00000557470 SNX9Q9Y5X1 595 aa6.24□□□□□ -1.41
VPS33B-207ENST00000557470 CPQQ9Y646 472 aa6.24□□□□□ -1.41
VPS33B-207ENST00000557470 HELZP42694 1942 aaKnown RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms