RNA–Protein interactions for RNA: ENST00000557434.5

LGMN-216, Transcript of legumain, humanhuman

TSL 5 BASIC

Gene LGMN, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGMN-216ENST00000557434 LMAN2LQ9H0V9 348 aa18.1■□□□□ 0.49
LGMN-216ENST00000557434 ABCC13Q9NSE7 274 aa18.1■□□□□ 0.49
LGMN-216ENST00000557434 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.1■□□□□ 0.49
LGMN-216ENST00000557434 EHD2Q9NZN4 543 aa18.1■□□□□ 0.49
LGMN-216ENST00000557434 PCSK1NQ9UHG2 260 aa18.1■□□□□ 0.49
LGMN-216ENST00000557434 USP18Q9UMW8 372 aa18.1■□□□□ 0.49
LGMN-216ENST00000557434 COLQQ9Y215 455 aaPredicted RBP18.1■□□□□ 0.49
LGMN-216ENST00000557434 MRFAP1Q9Y605 127 aa18.1■□□□□ 0.49
LGMN-216ENST00000557434 SAR1BQ9Y6B6 198 aa18.1■□□□□ 0.49
LGMN-216ENST00000557434 MIF4GDA9UHW6 222 aaKnown RBP18.09■□□□□ 0.49
LGMN-216ENST00000557434 M0QYT0 321 aa18.09■□□□□ 0.49
LGMN-216ENST00000557434 KCNK3O14649 394 aa18.09■□□□□ 0.49
LGMN-216ENST00000557434 TRUB2O95900 331 aaKnown RBP18.09■□□□□ 0.49
LGMN-216ENST00000557434 ZNF211Q13398 564 aaPredicted RBP18.09■□□□□ 0.49
LGMN-216ENST00000557434 SMTNL2Q2TAL5 461 aa18.09■□□□□ 0.49
LGMN-216ENST00000557434 LRIT3Q3SXY7 679 aa18.09■□□□□ 0.49
LGMN-216ENST00000557434 BTBD8Q5XKL5 378 aa18.09■□□□□ 0.49
LGMN-216ENST00000557434 STRADAQ7RTN6 431 aa18.09■□□□□ 0.49
LGMN-216ENST00000557434 CREG2Q8IUH2 290 aa18.09■□□□□ 0.49
LGMN-216ENST00000557434 HS6ST3Q8IZP7 471 aa18.09■□□□□ 0.49
LGMN-216ENST00000557434 PGAP3Q96FM1 320 aaPredicted RBP18.09■□□□□ 0.49
LGMN-216ENST00000557434 MS4A14Q96JA4 679 aa18.09■□□□□ 0.49
LGMN-216ENST00000557434 TMPRSS4Q9NRS4 437 aa18.09■□□□□ 0.49
LGMN-216ENST00000557434 KLHL11Q9NVR0 708 aa18.09■□□□□ 0.49
LGMN-216ENST00000557434 SMARCAL1Q9NZC9 954 aa18.09■□□□□ 0.49
LGMN-216ENST00000557434 SPTBN5Q9NRC6 3674 aaKnown RBP18.09■□□□□ 0.49
LGMN-216ENST00000557434 PRRC2BQ5JSZ5 2229 aaKnown RBP18.09■□□□□ 0.49
LGMN-216ENST00000557434 CCDC66A2RUB6 948 aa18.09■□□□□ 0.49
LGMN-216ENST00000557434 ZNF840PA6NDX5 716 aa18.09■□□□□ 0.49
LGMN-216ENST00000557434 PDE2AO00408 941 aaPredicted RBP18.09■□□□□ 0.49
LGMN-216ENST00000557434 CAPN9O14815 690 aa18.09■□□□□ 0.49
LGMN-216ENST00000557434 PSTPIP1O43586 416 aa18.09■□□□□ 0.49
LGMN-216ENST00000557434 C1RP00736 705 aa18.09■□□□□ 0.49
LGMN-216ENST00000557434 PYGMP11217 842 aa18.09■□□□□ 0.49
LGMN-216ENST00000557434 GJC1P36383 396 aa18.09■□□□□ 0.49
LGMN-216ENST00000557434 EPHB3P54753 998 aa18.09■□□□□ 0.49
LGMN-216ENST00000557434 DUSP6Q16828 381 aa18.09■□□□□ 0.49
LGMN-216ENST00000557434 KCNT1Q5JUK3 1230 aa18.09■□□□□ 0.49
LGMN-216ENST00000557434 LRRC38Q5VT99 294 aa18.09■□□□□ 0.49
LGMN-216ENST00000557434 SNX30Q5VWJ9 437 aa18.09■□□□□ 0.49
LGMN-216ENST00000557434 CCDC149Q6ZUS6 474 aa18.09■□□□□ 0.49
LGMN-216ENST00000557434 RHOT1Q8IXI2 618 aa18.09■□□□□ 0.49
LGMN-216ENST00000557434 CCDC185Q8N715 623 aa18.09■□□□□ 0.49
LGMN-216ENST00000557434 HERPUD2Q9BSE4 406 aa18.09■□□□□ 0.49
LGMN-216ENST00000557434 TTYH1Q9H313 450 aaPredicted RBP18.09■□□□□ 0.49
LGMN-216ENST00000557434 ZNF576Q9H609 170 aa18.09■□□□□ 0.49
LGMN-216ENST00000557434 CCSER2Q9H7U1 834 aa18.09■□□□□ 0.49
LGMN-216ENST00000557434 L2HGDHQ9H9P8 463 aa18.09■□□□□ 0.49
LGMN-216ENST00000557434 CLIC5Q9NZA1 410 aa18.09■□□□□ 0.49
LGMN-216ENST00000557434 SFMBT1Q9UHJ3 866 aa18.09■□□□□ 0.49
LGMN-216ENST00000557434 C2orf16Q68DN1 1984 aa18.08■□□□□ 0.48
LGMN-216ENST00000557434 MDM4O15151 490 aa18.08■□□□□ 0.48
LGMN-216ENST00000557434 CCL16O15467 120 aa18.08■□□□□ 0.48
LGMN-216ENST00000557434 MSI1O43347 362 aaKnown RBP18.08■□□□□ 0.48
LGMN-216ENST00000557434 ZMYND10O75800 440 aa18.08■□□□□ 0.48
LGMN-216ENST00000557434 RNF8O76064 485 aa18.08■□□□□ 0.48
LGMN-216ENST00000557434 F11P03951 625 aa18.08■□□□□ 0.48
LGMN-216ENST00000557434 RARGP13631 454 aa18.08■□□□□ 0.48
LGMN-216ENST00000557434 SSR1P43307 286 aaKnown RBP18.08■□□□□ 0.48
LGMN-216ENST00000557434 NRIP1P48552 1158 aa18.08■□□□□ 0.48
LGMN-216ENST00000557434 MSANTD2Q6P1R3 559 aa18.08■□□□□ 0.48
LGMN-216ENST00000557434 GAREM2Q75VX8 874 aa18.08■□□□□ 0.48
LGMN-216ENST00000557434 FAM131BQ86XD5 332 aa18.08■□□□□ 0.48
LGMN-216ENST00000557434 RAPGEF5Q92565 580 aa18.08■□□□□ 0.48
LGMN-216ENST00000557434 MRPL38Q96DV4 380 aaKnown RBP18.08■□□□□ 0.48
LGMN-216ENST00000557434 SLITRK1Q96PX8 696 aa18.08■□□□□ 0.48
LGMN-216ENST00000557434 SMOC2Q9H3U7 446 aa18.08■□□□□ 0.48
LGMN-216ENST00000557434 ZWILCHQ9H900 591 aa18.08■□□□□ 0.48
LGMN-216ENST00000557434 TLR8Q9NR97 1041 aaKnown RBP18.08■□□□□ 0.48
LGMN-216ENST00000557434 HCFC1R1Q9NWW0 138 aa18.08■□□□□ 0.48
LGMN-216ENST00000557434 STAP1Q9ULZ2 295 aa18.08■□□□□ 0.48
LGMN-216ENST00000557434 SYNJ2BP-COX16A0A087WUM0 186 aa18.07■□□□□ 0.48
LGMN-216ENST00000557434 C3orf70A6NLC5 250 aaPredicted RBP18.07■□□□□ 0.48
LGMN-216ENST00000557434 RARAP10276 462 aa18.07■□□□□ 0.48
LGMN-216ENST00000557434 NME3Q13232 169 aa18.07■□□□□ 0.48
LGMN-216ENST00000557434 VEPH1Q14D04 833 aa18.07■□□□□ 0.48
LGMN-216ENST00000557434 CA9Q16790 459 aa18.07■□□□□ 0.48
LGMN-216ENST00000557434 POLNQ7Z5Q5 900 aa18.07■□□□□ 0.48
LGMN-216ENST00000557434 PLEKHA4Q9H4M7 779 aa18.07■□□□□ 0.48
LGMN-216ENST00000557434 TLE6Q9H808 572 aa18.07■□□□□ 0.48
LGMN-216ENST00000557434 COX16Q9P0S2 106 aa18.07■□□□□ 0.48
LGMN-216ENST00000557434 CDC23Q9UJX2 597 aa18.07■□□□□ 0.48
LGMN-216ENST00000557434 IRAK2O43187 625 aa18.07■□□□□ 0.48
LGMN-216ENST00000557434 LRG1P02750 347 aa18.07■□□□□ 0.48
LGMN-216ENST00000557434 TCP1P17987 556 aaKnown RBP18.07■□□□□ 0.48
LGMN-216ENST00000557434 CCR2P41597 374 aa18.07■□□□□ 0.48
LGMN-216ENST00000557434 ARSEP51690 589 aa18.07■□□□□ 0.48
LGMN-216ENST00000557434 KATNAL2Q8IYT4 538 aa18.07■□□□□ 0.48
LGMN-216ENST00000557434 ARHGAP18Q8N392 663 aa18.07■□□□□ 0.48
LGMN-216ENST00000557434 LRRN4CLQ8ND94 238 aa18.07■□□□□ 0.48
LGMN-216ENST00000557434 OVCA2Q8WZ82 227 aa18.07■□□□□ 0.48
LGMN-216ENST00000557434 GOLGA1Q92805 767 aa18.07■□□□□ 0.48
LGMN-216ENST00000557434 CAPZA3Q96KX2 299 aa18.07■□□□□ 0.48
LGMN-216ENST00000557434 SNRNP25Q9BV90 132 aaKnown RBP18.07■□□□□ 0.48
LGMN-216ENST00000557434 CARD9Q9H257 536 aa18.07■□□□□ 0.48
LGMN-216ENST00000557434 GPATCH2LQ9NWQ4 482 aa18.07■□□□□ 0.48
LGMN-216ENST00000557434 DDIT4Q9NX09 232 aa18.07■□□□□ 0.48
LGMN-216ENST00000557434 C2orf78A6NCI8 922 aa18.06■□□□□ 0.48
LGMN-216ENST00000557434 PI4K2BG5E9Z4 385 aa18.06■□□□□ 0.48
LGMN-216ENST00000557434 SOX1O00570 391 aaPredicted RBP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms