RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 ZNF687Q8N1G0 1237 aa13.08□□□□□ -0.32
SLIRP-209ENST00000557342 SYNPOQ8N3V7 929 aa13.08□□□□□ -0.32
SLIRP-209ENST00000557342 PRSS33Q8NF86 280 aa13.08□□□□□ -0.32
SLIRP-209ENST00000557342 NDRG1Q92597 394 aaKnown RBP13.08□□□□□ -0.32
SLIRP-209ENST00000557342 SPAG5Q96R06 1193 aa13.08□□□□□ -0.32
SLIRP-209ENST00000557342 SLC4A5Q9BY07 1137 aa13.08□□□□□ -0.32
SLIRP-209ENST00000557342 DCLK3Q9C098 648 aa13.08□□□□□ -0.32
SLIRP-209ENST00000557342 MIS12Q9H081 205 aa13.08□□□□□ -0.32
SLIRP-209ENST00000557342 PDCL3Q9H2J4 239 aa13.08□□□□□ -0.32
SLIRP-209ENST00000557342 LMAN1LQ9HAT1 526 aa13.08□□□□□ -0.32
SLIRP-209ENST00000557342 MARCH2Q9P0N8 246 aa13.08□□□□□ -0.32
SLIRP-209ENST00000557342 F5P12259 2224 aa13.07□□□□□ -0.32
SLIRP-209ENST00000557342 GOLGA6L19H0YKK7 550 aa13.07□□□□□ -0.32
SLIRP-209ENST00000557342 GABBR2O75899 941 aa13.07□□□□□ -0.32
SLIRP-209ENST00000557342 LTFP02788 710 aa13.07□□□□□ -0.32
SLIRP-209ENST00000557342 CYP17A1P05093 508 aa13.07□□□□□ -0.32
SLIRP-209ENST00000557342 PNMA6AP0CW24 399 aaPredicted RBP13.07□□□□□ -0.32
SLIRP-209ENST00000557342 CHRNB1P11230 501 aa13.07□□□□□ -0.32
SLIRP-209ENST00000557342 CYP11B1P15538 503 aa13.07□□□□□ -0.32
SLIRP-209ENST00000557342 DRD1P21728 446 aa13.07□□□□□ -0.32
SLIRP-209ENST00000557342 STAT1P42224 750 aa13.07□□□□□ -0.32
SLIRP-209ENST00000557342 KLK7P49862 253 aa13.07□□□□□ -0.32
SLIRP-209ENST00000557342 PDCLQ13371 301 aa13.07□□□□□ -0.32
SLIRP-209ENST00000557342 FZD5Q13467 585 aa13.07□□□□□ -0.32
SLIRP-209ENST00000557342 DHCR24Q15392 516 aa13.07□□□□□ -0.32
SLIRP-209ENST00000557342 TXNDC11Q6PKC3 985 aa13.07□□□□□ -0.32
SLIRP-209ENST00000557342 C1orf210Q8IVY1 113 aa13.07□□□□□ -0.32
SLIRP-209ENST00000557342 BBS7Q8IWZ6 715 aa13.07□□□□□ -0.32
SLIRP-209ENST00000557342 SCUBE3Q8IX30 993 aa13.07□□□□□ -0.32
SLIRP-209ENST00000557342 CD101Q93033 1021 aa13.07□□□□□ -0.32
SLIRP-209ENST00000557342 PLD4Q96BZ4 506 aa13.07□□□□□ -0.32
SLIRP-209ENST00000557342 P2RY13Q9BPV8 354 aa13.07□□□□□ -0.32
SLIRP-209ENST00000557342 CHRDQ9H2X0 955 aa13.07□□□□□ -0.32
SLIRP-209ENST00000557342 CBX8Q9HC52 389 aa13.07□□□□□ -0.32
SLIRP-209ENST00000557342 NLRC4Q9NPP4 1024 aa13.07□□□□□ -0.32
SLIRP-209ENST00000557342 RTN4Q9NQC3 1192 aaKnown RBP13.07□□□□□ -0.32
SLIRP-209ENST00000557342 SPATA6Q9NWH7 488 aaPredicted RBP13.07□□□□□ -0.32
SLIRP-209ENST00000557342 RAPGEFL1Q9UHV5 662 aa13.07□□□□□ -0.32
SLIRP-209ENST00000557342 HBS1LQ9Y450 684 aaKnown RBP13.07□□□□□ -0.32
SLIRP-209ENST00000557342 SLC12A8A0AV02 714 aa13.06□□□□□ -0.32
SLIRP-209ENST00000557342 E5RJQ4 531 aa13.06□□□□□ -0.32
SLIRP-209ENST00000557342 SCAMP3O14828 347 aaKnown RBP13.06□□□□□ -0.32
SLIRP-209ENST00000557342 STC2O76061 302 aa13.06□□□□□ -0.32
SLIRP-209ENST00000557342 SERPINC1P01008 464 aa13.06□□□□□ -0.32
SLIRP-209ENST00000557342 ADH5P11766 374 aa13.06□□□□□ -0.32
SLIRP-209ENST00000557342 SOX5P35711 763 aa13.06□□□□□ -0.32
SLIRP-209ENST00000557342 EIF2DP41214 584 aaKnown RBP13.06□□□□□ -0.32
SLIRP-209ENST00000557342 GALK1P51570 392 aa13.06□□□□□ -0.32
SLIRP-209ENST00000557342 JAM2P57087 298 aa13.06□□□□□ -0.32
SLIRP-209ENST00000557342 GAD2Q05329 585 aa13.06□□□□□ -0.32
SLIRP-209ENST00000557342 TCF15Q12870 199 aa13.06□□□□□ -0.32
SLIRP-209ENST00000557342 FBXO43Q4G163 708 aa13.06□□□□□ -0.32
SLIRP-209ENST00000557342 PREPLQ4J6C6 727 aaPredicted RBP13.06□□□□□ -0.32
SLIRP-209ENST00000557342 TMEM196Q5HYL7 178 aa13.06□□□□□ -0.32
SLIRP-209ENST00000557342 MSANTD2Q6P1R3 559 aa13.06□□□□□ -0.32
SLIRP-209ENST00000557342 RHBDF2Q6PJF5 856 aa13.06□□□□□ -0.32
SLIRP-209ENST00000557342 MAMSTRQ6ZN01 415 aa13.06□□□□□ -0.32
SLIRP-209ENST00000557342 BEND5Q7L4P6 421 aa13.06□□□□□ -0.32
SLIRP-209ENST00000557342 ZNF677Q86XU0 584 aa13.06□□□□□ -0.32
SLIRP-209ENST00000557342 PASD1Q8IV76 773 aa13.06□□□□□ -0.32
SLIRP-209ENST00000557342 FMNL3Q8IVF7 1028 aa13.06□□□□□ -0.32
SLIRP-209ENST00000557342 TMEM35BQ8NCS4 154 aa13.06□□□□□ -0.32
SLIRP-209ENST00000557342 CCDC26Q8TAB7 109 aa13.06□□□□□ -0.32
SLIRP-209ENST00000557342 IPO4Q8TEX9 1081 aaKnown RBP13.06□□□□□ -0.32
SLIRP-209ENST00000557342 CLEC4CQ8WTT0 213 aa13.06□□□□□ -0.32
SLIRP-209ENST00000557342 EDEM1Q92611 657 aa13.06□□□□□ -0.32
SLIRP-209ENST00000557342 FAM149B1Q96BN6 582 aa13.06□□□□□ -0.32
SLIRP-209ENST00000557342 PPP1R13BQ96KQ4 1090 aa13.06□□□□□ -0.32
SLIRP-209ENST00000557342 SPHK2Q9NRA0 654 aa13.06□□□□□ -0.32
SLIRP-209ENST00000557342 CYTH4Q9UIA0 394 aa13.06□□□□□ -0.32
SLIRP-209ENST00000557342 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.05□□□□□ -0.32
SLIRP-209ENST00000557342 EPHB6O15197 1021 aa13.05□□□□□ -0.32
SLIRP-209ENST00000557342 LAMTOR5O43504 91 aa13.05□□□□□ -0.32
SLIRP-209ENST00000557342 GREM1O60565 184 aa13.05□□□□□ -0.32
SLIRP-209ENST00000557342 GFPT2O94808 682 aa13.05□□□□□ -0.32
SLIRP-209ENST00000557342 GLI1P08151 1106 aa13.05□□□□□ -0.32
SLIRP-209ENST00000557342 HMBSP08397 361 aa13.05□□□□□ -0.32
SLIRP-209ENST00000557342 CDH5P33151 784 aaPredicted RBP13.05□□□□□ -0.32
SLIRP-209ENST00000557342 CHKAP35790 457 aa13.05□□□□□ -0.32
SLIRP-209ENST00000557342 HARS2P49590 506 aaKnown RBP13.05□□□□□ -0.32
SLIRP-209ENST00000557342 CCINQ13939 588 aa13.05□□□□□ -0.32
SLIRP-209ENST00000557342 PPP2R5DQ14738 602 aa13.05□□□□□ -0.32
SLIRP-209ENST00000557342 ANGPT1Q15389 498 aa13.05□□□□□ -0.32
SLIRP-209ENST00000557342 NFKBIBQ15653 356 aa13.05□□□□□ -0.32
SLIRP-209ENST00000557342 LY6G5CQ5SRR4 150 aa13.05□□□□□ -0.32
SLIRP-209ENST00000557342 FSTL4Q6MZW2 842 aa13.05□□□□□ -0.32
SLIRP-209ENST00000557342 Q6ZNB5 142 aa13.05□□□□□ -0.32
SLIRP-209ENST00000557342 CACNA2D4Q7Z3S7 1137 aa13.05□□□□□ -0.32
SLIRP-209ENST00000557342 LUZP1Q86V48 1076 aa13.05□□□□□ -0.32
SLIRP-209ENST00000557342 WDTC1Q8N5D0 677 aa13.05□□□□□ -0.32
SLIRP-209ENST00000557342 MSANTD4Q8NCY6 345 aa13.05□□□□□ -0.32
SLIRP-209ENST00000557342 C1orf131Q8NDD1 294 aaKnown RBP13.05□□□□□ -0.32
SLIRP-209ENST00000557342 WBP2Q969T9 261 aa13.05□□□□□ -0.32
SLIRP-209ENST00000557342 CHFRQ96EP1 664 aa13.05□□□□□ -0.32
SLIRP-209ENST00000557342 CPXM1Q96SM3 734 aa13.05□□□□□ -0.32
SLIRP-209ENST00000557342 SYNCQ9H7C4 482 aa13.05□□□□□ -0.32
SLIRP-209ENST00000557342 ATG2BQ96BY7 2078 aa13.04□□□□□ -0.32
SLIRP-209ENST00000557342 A0A1B0GTH6 734 aa13.04□□□□□ -0.32
SLIRP-209ENST00000557342 A0A1W2PQC6 194 aa13.04□□□□□ -0.32
SLIRP-209ENST00000557342 CAPN9O14815 690 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms