RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 ZC3H3Q8IXZ2 948 aaKnown RBP14.91□□□□□ -0.02
SNX6-210ENST00000557341 SLC4A11Q8NBS3 891 aa14.91□□□□□ -0.02
SNX6-210ENST00000557341 SMARCE1Q969G3 411 aa14.91□□□□□ -0.02
SNX6-210ENST00000557341 TMEM176AQ96HP8 235 aa14.91□□□□□ -0.02
SNX6-210ENST00000557341 HEXIM2Q96MH2 286 aaKnown RBP14.91□□□□□ -0.02
SNX6-210ENST00000557341 XPO6Q96QU8 1125 aaKnown RBP14.91□□□□□ -0.02
SNX6-210ENST00000557341 BBS2Q9BXC9 721 aa14.91□□□□□ -0.02
SNX6-210ENST00000557341 GTPBP4Q9BZE4 634 aaKnown RBP14.91□□□□□ -0.02
SNX6-210ENST00000557341 SMOC1Q9H4F8 434 aa14.91□□□□□ -0.02
SNX6-210ENST00000557341 ZDHHC4Q9NPG8 344 aa14.91□□□□□ -0.02
SNX6-210ENST00000557341 RXFP3Q9NSD7 469 aa14.91□□□□□ -0.02
SNX6-210ENST00000557341 DNAJC17Q9NVM6 304 aaKnown RBP14.91□□□□□ -0.02
SNX6-210ENST00000557341 CLIC5Q9NZA1 410 aa14.91□□□□□ -0.02
SNX6-210ENST00000557341 MARK1Q9P0L2 795 aa14.91□□□□□ -0.02
SNX6-210ENST00000557341 NUDT5Q9UKK9 219 aa14.91□□□□□ -0.02
SNX6-210ENST00000557341 INVSQ9Y283 1065 aa14.91□□□□□ -0.02
SNX6-210ENST00000557341 USP3Q9Y6I4 520 aa14.91□□□□□ -0.02
SNX6-210ENST00000557341 TCRBV21S2A2A0A5A6 115 aa14.9□□□□□ -0.02
SNX6-210ENST00000557341 MDM4O15151 490 aa14.9□□□□□ -0.02
SNX6-210ENST00000557341 ADAM23O75077 832 aa14.9□□□□□ -0.02
SNX6-210ENST00000557341 CAVIN2O95810 425 aa14.9□□□□□ -0.02
SNX6-210ENST00000557341 ADRB1P08588 477 aa14.9□□□□□ -0.02
SNX6-210ENST00000557341 RALAP11233 206 aa14.9□□□□□ -0.02
SNX6-210ENST00000557341 BCKDHBP21953 392 aa14.9□□□□□ -0.02
SNX6-210ENST00000557341 KCNA4P22459 653 aa14.9□□□□□ -0.02
SNX6-210ENST00000557341 P2RY2P41231 377 aa14.9□□□□□ -0.02
SNX6-210ENST00000557341 PLA2G4AP47712 749 aa14.9□□□□□ -0.02
SNX6-210ENST00000557341 RAD23BP54727 409 aa14.9□□□□□ -0.02
SNX6-210ENST00000557341 SLC8A3P57103 927 aa14.9□□□□□ -0.02
SNX6-210ENST00000557341 STPG1Q5TH74 334 aa14.9□□□□□ -0.02
SNX6-210ENST00000557341 TCEAL6Q6IPX3 200 aa14.9□□□□□ -0.02
SNX6-210ENST00000557341 TPGS1Q6ZTW0 290 aa14.9□□□□□ -0.02
SNX6-210ENST00000557341 CYP2U1Q7Z449 544 aa14.9□□□□□ -0.02
SNX6-210ENST00000557341 SCD5Q86SK9 330 aa14.9□□□□□ -0.02
SNX6-210ENST00000557341 MIB1Q86YT6 1006 aa14.9□□□□□ -0.02
SNX6-210ENST00000557341 ZNF276Q8N554 614 aa14.9□□□□□ -0.02
SNX6-210ENST00000557341 ENGASEQ8NFI3 743 aa14.9□□□□□ -0.02
SNX6-210ENST00000557341 OLIG1Q8TAK6 271 aa14.9□□□□□ -0.02
SNX6-210ENST00000557341 SPATA20Q8TB22 786 aa14.9□□□□□ -0.02
SNX6-210ENST00000557341 HMGB4Q8WW32 186 aa14.9□□□□□ -0.02
SNX6-210ENST00000557341 TCEAL3Q969E4 200 aa14.9□□□□□ -0.02
SNX6-210ENST00000557341 EDEM2Q9BV94 578 aa14.9□□□□□ -0.02
SNX6-210ENST00000557341 WDR35Q9P2L0 1181 aa14.9□□□□□ -0.02
SNX6-210ENST00000557341 CIZ1Q9ULV3 898 aaPredicted RBP14.9□□□□□ -0.02
SNX6-210ENST00000557341 MUC22E2RYF6 1773 aaPredicted RBP14.89□□□□□ -0.03
SNX6-210ENST00000557341 TRIM49BA6NDI0 452 aa14.89□□□□□ -0.03
SNX6-210ENST00000557341 PSMA7O14818 248 aa14.89□□□□□ -0.03
SNX6-210ENST00000557341 STC2O76061 302 aa14.89□□□□□ -0.03
SNX6-210ENST00000557341 HOXB2P14652 356 aa14.89□□□□□ -0.03
SNX6-210ENST00000557341 PMS1P54277 932 aaKnown RBP14.89□□□□□ -0.03
SNX6-210ENST00000557341 YWHAEP62258 255 aaKnown RBP14.89□□□□□ -0.03
SNX6-210ENST00000557341 STIM1Q13586 685 aa14.89□□□□□ -0.03
SNX6-210ENST00000557341 CUL2Q13617 745 aa14.89□□□□□ -0.03
SNX6-210ENST00000557341 RNF43Q68DV7 783 aa14.89□□□□□ -0.03
SNX6-210ENST00000557341 ARHGAP17Q68EM7 881 aa14.89□□□□□ -0.03
SNX6-210ENST00000557341 ANKRD40Q6AI12 368 aa14.89□□□□□ -0.03
SNX6-210ENST00000557341 Q6ZNB5 142 aa14.89□□□□□ -0.03
SNX6-210ENST00000557341 ARHGAP18Q8N392 663 aa14.89□□□□□ -0.03
SNX6-210ENST00000557341 ERCC4Q92889 916 aaPredicted RBP14.89□□□□□ -0.03
SNX6-210ENST00000557341 TIGD1Q96MW7 591 aa14.89□□□□□ -0.03
SNX6-210ENST00000557341 ARMCX3Q9UH62 379 aaPredicted RBP14.89□□□□□ -0.03
SNX6-210ENST00000557341 RASAL2Q9UJF2 1139 aa14.89□□□□□ -0.03
SNX6-210ENST00000557341 COQ4Q9Y3A0 265 aa14.89□□□□□ -0.03
SNX6-210ENST00000557341 STARD13Q9Y3M8 1113 aa14.89□□□□□ -0.03
SNX6-210ENST00000557341 CHD8Q9HCK8 2581 aa14.89□□□□□ -0.03
SNX6-210ENST00000557341 ACACBO00763 2458 aa14.88□□□□□ -0.03
SNX6-210ENST00000557341 TRIM24O15164 1050 aa14.88□□□□□ -0.03
SNX6-210ENST00000557341 NTSR1P30989 418 aa14.88□□□□□ -0.03
SNX6-210ENST00000557341 DHPSP49366 369 aaPredicted RBP14.88□□□□□ -0.03
SNX6-210ENST00000557341 DGKGP49619 791 aa14.88□□□□□ -0.03
SNX6-210ENST00000557341 BCAT1P54687 386 aa14.88□□□□□ -0.03
SNX6-210ENST00000557341 COG7P83436 770 aa14.88□□□□□ -0.03
SNX6-210ENST00000557341 BYSLQ13895 437 aaKnown RBP14.88□□□□□ -0.03
SNX6-210ENST00000557341 RAB41Q5JT25 222 aa14.88□□□□□ -0.03
SNX6-210ENST00000557341 RSRC2Q7L4I2 434 aaKnown RBP14.88□□□□□ -0.03
SNX6-210ENST00000557341 LPCAT2Q7L5N7 544 aa14.88□□□□□ -0.03
SNX6-210ENST00000557341 PIGZQ86VD9 579 aa14.88□□□□□ -0.03
SNX6-210ENST00000557341 PGBD3Q8N328 593 aa14.88□□□□□ -0.03
SNX6-210ENST00000557341 ANKRD52Q8NB46 1076 aa14.88□□□□□ -0.03
SNX6-210ENST00000557341 RLN3Q8WXF3 142 aa14.88□□□□□ -0.03
SNX6-210ENST00000557341 TATDN2Q93075 761 aa14.88□□□□□ -0.03
SNX6-210ENST00000557341 SLC35C1Q96A29 364 aa14.88□□□□□ -0.03
SNX6-210ENST00000557341 UBXN6Q9BZV1 441 aa14.88□□□□□ -0.03
SNX6-210ENST00000557341 ZNF510Q9Y2H8 683 aa14.88□□□□□ -0.03
SNX6-210ENST00000557341 TP53BP1Q12888 1972 aaPredicted RBP14.87□□□□□ -0.03
SNX6-210ENST00000557341 TPRP12270 2363 aaKnown RBP14.87□□□□□ -0.03
SNX6-210ENST00000557341 LNP1A1A4G5 178 aa14.87□□□□□ -0.03
SNX6-210ENST00000557341 KHNYNO15037 678 aaKnown RBP14.87□□□□□ -0.03
SNX6-210ENST00000557341 MAP3K13O43283 966 aa14.87□□□□□ -0.03
SNX6-210ENST00000557341 TBXAS1P24557 533 aaPredicted RBP14.87□□□□□ -0.03
SNX6-210ENST00000557341 CORO1AP31146 461 aaKnown RBP14.87□□□□□ -0.03
SNX6-210ENST00000557341 PPP1R2P41236 205 aa14.87□□□□□ -0.03
SNX6-210ENST00000557341 YWHAGP61981 247 aaKnown RBP eCLIP14.87□□□□□ -0.03
SNX6-210ENST00000557341 EFEMP1Q12805 493 aa14.87□□□□□ -0.03
SNX6-210ENST00000557341 GOLGA7BQ2TAP0 167 aa14.87□□□□□ -0.03
SNX6-210ENST00000557341 SGO2Q562F6 1265 aa14.87□□□□□ -0.03
SNX6-210ENST00000557341 EGFLAMQ63HQ2 1017 aa14.87□□□□□ -0.03
SNX6-210ENST00000557341 SDE2Q6IQ49 451 aa14.87□□□□□ -0.03
SNX6-210ENST00000557341 CHPFQ8IZ52 775 aa14.87□□□□□ -0.03
SNX6-210ENST00000557341 BHMTQ93088 406 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms