RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 WDR35Q9P2L0 1181 aa13.29□□□□□ -0.28
PSEN1-221ENST00000557293 PCDHB13Q9Y5F0 798 aa13.29□□□□□ -0.28
PSEN1-221ENST00000557293 FRMD3A2A2Y4 597 aa13.28□□□□□ -0.28
PSEN1-221ENST00000557293 KCNK3O14649 394 aa13.28□□□□□ -0.28
PSEN1-221ENST00000557293 TNFSF14O43557 240 aa13.28□□□□□ -0.28
PSEN1-221ENST00000557293 TLX3O43711 291 aaPredicted RBP13.28□□□□□ -0.28
PSEN1-221ENST00000557293 PRPF6O94906 941 aaKnown RBP13.28□□□□□ -0.28
PSEN1-221ENST00000557293 GCNT3O95395 438 aa13.28□□□□□ -0.28
PSEN1-221ENST00000557293 TNNC2P02585 160 aa13.28□□□□□ -0.28
PSEN1-221ENST00000557293 GAP43P17677 238 aa13.28□□□□□ -0.28
PSEN1-221ENST00000557293 HOXD13P35453 343 aa13.28□□□□□ -0.28
PSEN1-221ENST00000557293 IL12RB1P42701 662 aa13.28□□□□□ -0.28
PSEN1-221ENST00000557293 ABCG1P45844 678 aa13.28□□□□□ -0.28
PSEN1-221ENST00000557293 DGKGP49619 791 aa13.28□□□□□ -0.28
PSEN1-221ENST00000557293 COPAP53621 1224 aa13.28□□□□□ -0.28
PSEN1-221ENST00000557293 KIF19Q2TAC6 998 aa13.28□□□□□ -0.28
PSEN1-221ENST00000557293 KCNT1Q5JUK3 1230 aa13.28□□□□□ -0.28
PSEN1-221ENST00000557293 IL27RAQ6UWB1 636 aa13.28□□□□□ -0.28
PSEN1-221ENST00000557293 TMPRSS6Q8IU80 811 aa13.28□□□□□ -0.28
PSEN1-221ENST00000557293 ZNF843Q8N446 348 aa13.28□□□□□ -0.28
PSEN1-221ENST00000557293 RBBP8NLQ8NC74 664 aaPredicted RBP13.28□□□□□ -0.28
PSEN1-221ENST00000557293 B3GALNT2Q8NCR0 500 aa13.28□□□□□ -0.28
PSEN1-221ENST00000557293 NOC3LQ8WTT2 800 aaKnown RBP13.28□□□□□ -0.28
PSEN1-221ENST00000557293 ZNF516Q92618 1163 aa13.28□□□□□ -0.28
PSEN1-221ENST00000557293 DCBLD2Q96PD2 775 aa13.28□□□□□ -0.28
PSEN1-221ENST00000557293 XPO6Q96QU8 1125 aaKnown RBP13.28□□□□□ -0.28
PSEN1-221ENST00000557293 OSER1Q9NX31 292 aa13.28□□□□□ -0.28
PSEN1-221ENST00000557293 THAP10Q9P2Z0 257 aaPredicted RBP13.28□□□□□ -0.28
PSEN1-221ENST00000557293 SNX11Q9Y5W9 270 aa13.28□□□□□ -0.28
PSEN1-221ENST00000557293 ZNF233A6NK53 670 aa13.27□□□□□ -0.29
PSEN1-221ENST00000557293 A8MXQ7 604 aa13.27□□□□□ -0.29
PSEN1-221ENST00000557293 E9PAM4 449 aa13.27□□□□□ -0.29
PSEN1-221ENST00000557293 BEST1O76090 585 aa13.27□□□□□ -0.29
PSEN1-221ENST00000557293 EIF2S3P41091 472 aaKnown RBP13.27□□□□□ -0.29
PSEN1-221ENST00000557293 SLC5A3P53794 718 aa13.27□□□□□ -0.29
PSEN1-221ENST00000557293 SURF1Q15526 300 aa13.27□□□□□ -0.29
PSEN1-221ENST00000557293 LARP1BQ659C4 914 aaKnown RBP13.27□□□□□ -0.29
PSEN1-221ENST00000557293 DHRS13Q6UX07 377 aa13.27□□□□□ -0.29
PSEN1-221ENST00000557293 Q6ZNB5 142 aa13.27□□□□□ -0.29
PSEN1-221ENST00000557293 WDR49Q8IV35 697 aa13.27□□□□□ -0.29
PSEN1-221ENST00000557293 SYCP3Q8IZU3 236 aa13.27□□□□□ -0.29
PSEN1-221ENST00000557293 LSM14AQ8ND56 463 aaKnown RBP13.27□□□□□ -0.29
PSEN1-221ENST00000557293 SMOQ99835 787 aa13.27□□□□□ -0.29
PSEN1-221ENST00000557293 XYLT2Q9H1B5 865 aa13.27□□□□□ -0.29
PSEN1-221ENST00000557293 COMMD8Q9NX08 183 aa13.27□□□□□ -0.29
PSEN1-221ENST00000557293 PLK2Q9NYY3 685 aa13.27□□□□□ -0.29
PSEN1-221ENST00000557293 SLC27A6Q9Y2P4 619 aa13.27□□□□□ -0.29
PSEN1-221ENST00000557293 KALRNO60229 2985 aa13.27□□□□□ -0.29
PSEN1-221ENST00000557293 CFAP46Q8IYW2 2715 aa13.26□□□□□ -0.29
PSEN1-221ENST00000557293 PLK4O00444 970 aa13.26□□□□□ -0.29
PSEN1-221ENST00000557293 TLR5O60602 858 aa13.26□□□□□ -0.29
PSEN1-221ENST00000557293 C7P10643 843 aa13.26□□□□□ -0.29
PSEN1-221ENST00000557293 OXTRP30559 389 aa13.26□□□□□ -0.29
PSEN1-221ENST00000557293 CDH8P55286 799 aa13.26□□□□□ -0.29
PSEN1-221ENST00000557293 CLDN6P56747 220 aa13.26□□□□□ -0.29
PSEN1-221ENST00000557293 NUMA1Q14980 2115 aa13.26□□□□□ -0.29
PSEN1-221ENST00000557293 GEN1Q17RS7 908 aa13.26□□□□□ -0.29
PSEN1-221ENST00000557293 WDR72Q3MJ13 1102 aa13.26□□□□□ -0.29
PSEN1-221ENST00000557293 FAM35AQ86V20 835 aa13.26□□□□□ -0.29
PSEN1-221ENST00000557293 FUKQ8N0W3 1084 aa13.26□□□□□ -0.29
PSEN1-221ENST00000557293 SIPA1Q96FS4 1042 aa13.26□□□□□ -0.29
PSEN1-221ENST00000557293 NUP58Q9BVL2 599 aa13.26□□□□□ -0.29
PSEN1-221ENST00000557293 STK17AQ9UEE5 414 aa13.26□□□□□ -0.29
PSEN1-221ENST00000557293 R3HCC1Q9Y3T6 440 aaKnown RBP13.26□□□□□ -0.29
PSEN1-221ENST00000557293 PTPRQQ9UMZ3 2332 aa13.25□□□□□ -0.29
PSEN1-221ENST00000557293 TENM4Q6N022 2769 aa13.25□□□□□ -0.29
PSEN1-221ENST00000557293 H0Y8X5 98 aa13.25□□□□□ -0.29
PSEN1-221ENST00000557293 KIAA0391O15091 583 aaKnown RBP13.25□□□□□ -0.29
PSEN1-221ENST00000557293 PCDHGA12O60330 932 aa13.25□□□□□ -0.29
PSEN1-221ENST00000557293 STAU1O95793 577 aaKnown RBP13.25□□□□□ -0.29
PSEN1-221ENST00000557293 PENKP01210 267 aaPredicted RBP13.25□□□□□ -0.29
PSEN1-221ENST00000557293 KLKB1P03952 638 aa13.25□□□□□ -0.29
PSEN1-221ENST00000557293 ZNF132P52740 706 aa13.25□□□□□ -0.29
PSEN1-221ENST00000557293 MFAP3P55082 362 aa13.25□□□□□ -0.29
PSEN1-221ENST00000557293 MYL6P60660 151 aa13.25□□□□□ -0.29
PSEN1-221ENST00000557293 SUZ12Q15022 739 aaKnown RBP13.25□□□□□ -0.29
PSEN1-221ENST00000557293 SF3A1Q15459 793 aaKnown RBP13.25□□□□□ -0.29
PSEN1-221ENST00000557293 FYB2Q5VWT5 728 aa13.25□□□□□ -0.29
PSEN1-221ENST00000557293 SV2BQ7L1I2 683 aa13.25□□□□□ -0.29
PSEN1-221ENST00000557293 ZNF605Q86T29 641 aa13.25□□□□□ -0.29
PSEN1-221ENST00000557293 TMPRSS12Q86WS5 348 aa13.25□□□□□ -0.29
PSEN1-221ENST00000557293 RASSF8Q8NHQ8 419 aa13.25□□□□□ -0.29
PSEN1-221ENST00000557293 BHMTQ93088 406 aa13.25□□□□□ -0.29
PSEN1-221ENST00000557293 PIWIL1Q96J94 861 aaKnown RBP13.25□□□□□ -0.29
PSEN1-221ENST00000557293 ORAI3Q9BRQ5 295 aa13.25□□□□□ -0.29
PSEN1-221ENST00000557293 SDCBP2Q9H190 292 aa13.25□□□□□ -0.29
PSEN1-221ENST00000557293 C6orf106Q9H6K1 298 aaPredicted RBP13.25□□□□□ -0.29
PSEN1-221ENST00000557293 OSGEPQ9NPF4 335 aa13.25□□□□□ -0.29
PSEN1-221ENST00000557293 CYLDQ9NQC7 956 aa13.25□□□□□ -0.29
PSEN1-221ENST00000557293 CLEC4EQ9ULY5 219 aa13.25□□□□□ -0.29
PSEN1-221ENST00000557293 ANKRD6Q9Y2G4 727 aa13.25□□□□□ -0.29
PSEN1-221ENST00000557293 TMEM131Q92545 1883 aa13.25□□□□□ -0.29
PSEN1-221ENST00000557293 ZNF462Q96JM2 2506 aa13.24□□□□□ -0.29
PSEN1-221ENST00000557293 MAST4O15021 2626 aa13.24□□□□□ -0.29
PSEN1-221ENST00000557293 MDM4O15151 490 aa13.24□□□□□ -0.29
PSEN1-221ENST00000557293 ACSL1P33121 698 aa13.24□□□□□ -0.29
PSEN1-221ENST00000557293 ATP5C1P36542 298 aaKnown RBP13.24□□□□□ -0.29
PSEN1-221ENST00000557293 ALCAMQ13740 583 aa13.24□□□□□ -0.29
PSEN1-221ENST00000557293 ZNF234Q14588 700 aa13.24□□□□□ -0.29
PSEN1-221ENST00000557293 STARD3Q14849 445 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms