RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 SLC39A14Q15043 492 aa12.99□□□□□ -0.33
SNX6-209ENST00000557265 ZNF699Q32M78 642 aa12.99□□□□□ -0.33
SNX6-209ENST00000557265 FUT11Q495W5 492 aa12.99□□□□□ -0.33
SNX6-209ENST00000557265 FAM26FQ5R3K3 315 aa12.99□□□□□ -0.33
SNX6-209ENST00000557265 MDM1Q8TC05 714 aa12.99□□□□□ -0.33
SNX6-209ENST00000557265 SLC2A14Q8TDB8 520 aa12.99□□□□□ -0.33
SNX6-209ENST00000557265 HNRNPLLQ8WVV9 542 aaKnown RBP12.99□□□□□ -0.33
SNX6-209ENST00000557265 DNASE2BQ8WZ79 361 aa12.99□□□□□ -0.33
SNX6-209ENST00000557265 GPR174Q9BXC1 333 aa12.99□□□□□ -0.33
SNX6-209ENST00000557265 MIR1-1HGQ9H1L0 117 aa12.99□□□□□ -0.33
SNX6-209ENST00000557265 FBXO44Q9H4M3 255 aa12.99□□□□□ -0.33
SNX6-209ENST00000557265 IL21RQ9HBE5 538 aa12.99□□□□□ -0.33
SNX6-209ENST00000557265 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.99□□□□□ -0.332e-9■■■■■ 223.6
SNX6-209ENST00000557265 KBTBD4Q9NVX7 518 aa12.99□□□□□ -0.33
SNX6-209ENST00000557265 OSER1Q9NX31 292 aa12.99□□□□□ -0.33
SNX6-209ENST00000557265 LSM7Q9UK45 103 aaKnown RBP12.99□□□□□ -0.33
SNX6-209ENST00000557265 PCOLCE2Q9UKZ9 415 aa12.99□□□□□ -0.33
SNX6-209ENST00000557265 RAXQ9Y2V3 346 aa12.99□□□□□ -0.33
SNX6-209ENST00000557265 STON1Q9Y6Q2 735 aa12.99□□□□□ -0.33
SNX6-209ENST00000557265 MYOFQ9NZM1 2061 aa12.99□□□□□ -0.33
SNX6-209ENST00000557265 PCDH15Q96QU1 1955 aa12.99□□□□□ -0.33
SNX6-209ENST00000557265 TNRC6BQ9UPQ9 1833 aaKnown RBP12.99□□□□□ -0.33
SNX6-209ENST00000557265 IGSF10Q6WRI0 2623 aa12.98□□□□□ -0.33
SNX6-209ENST00000557265 APC2O95996 2303 aa12.98□□□□□ -0.33
SNX6-209ENST00000557265 NCAM1P13591 858 aa12.98□□□□□ -0.33
SNX6-209ENST00000557265 SNRPFP62306 86 aaKnown RBP12.98□□□□□ -0.33
SNX6-209ENST00000557265 GOLGA8FQ08AF8 430 aa12.98□□□□□ -0.33
SNX6-209ENST00000557265 GOLGA8DPQ0D2H9 430 aa12.98□□□□□ -0.33
SNX6-209ENST00000557265 ORC1Q13415 861 aa12.98□□□□□ -0.33
SNX6-209ENST00000557265 BIRC3Q13489 604 aa12.98□□□□□ -0.33
SNX6-209ENST00000557265 NCOA4Q13772 614 aa12.98□□□□□ -0.33
SNX6-209ENST00000557265 STARD3Q14849 445 aa12.98□□□□□ -0.33
SNX6-209ENST00000557265 ZNF667Q5HYK9 610 aa12.98□□□□□ -0.33
SNX6-209ENST00000557265 GLRX5Q86SX6 157 aa12.98□□□□□ -0.33
SNX6-209ENST00000557265 METTL3Q86U44 580 aaKnown RBP12.98□□□□□ -0.33
SNX6-209ENST00000557265 ZCCHC9Q8N567 271 aaKnown RBP12.98□□□□□ -0.33
SNX6-209ENST00000557265 USP28Q96RU2 1077 aa12.98□□□□□ -0.33
SNX6-209ENST00000557265 SDCBP2Q9H190 292 aa12.98□□□□□ -0.33
SNX6-209ENST00000557265 GAREM1Q9H706 876 aa12.98□□□□□ -0.33
SNX6-209ENST00000557265 VRTNQ9H8Y1 702 aa12.98□□□□□ -0.33
SNX6-209ENST00000557265 PRDM16Q9HAZ2 1276 aa12.98□□□□□ -0.33
SNX6-209ENST00000557265 CSNK1G1Q9HCP0 422 aa12.98□□□□□ -0.33
SNX6-209ENST00000557265 CYLDQ9NQC7 956 aa12.98□□□□□ -0.33
SNX6-209ENST00000557265 ITM2CQ9NQX7 267 aa12.98□□□□□ -0.33
SNX6-209ENST00000557265 WSB2Q9NYS7 404 aaPredicted RBP12.98□□□□□ -0.33
SNX6-209ENST00000557265 PLK2Q9NYY3 685 aa12.98□□□□□ -0.33
SNX6-209ENST00000557265 NUDT5Q9UKK9 219 aa12.98□□□□□ -0.33
SNX6-209ENST00000557265 NFE2L3Q9Y4A8 694 aa12.98□□□□□ -0.33
SNX6-209ENST00000557265 MYO18AQ92614 2054 aaKnown RBP12.98□□□□□ -0.33
SNX6-209ENST00000557265 MDM4O15151 490 aa12.97□□□□□ -0.33
SNX6-209ENST00000557265 CYP26A1O43174 497 aa12.97□□□□□ -0.33
SNX6-209ENST00000557265 EXOC3O60645 756 aa12.97□□□□□ -0.33
SNX6-209ENST00000557265 AMPD3Q01432 767 aa12.97□□□□□ -0.33
SNX6-209ENST00000557265 E2F4Q16254 413 aa12.97□□□□□ -0.33
SNX6-209ENST00000557265 GPRIN1Q7Z2K8 1008 aa12.97□□□□□ -0.33
SNX6-209ENST00000557265 C12orf29Q8N999 325 aa12.97□□□□□ -0.33
SNX6-209ENST00000557265 CADM4Q8NFZ8 388 aa12.97□□□□□ -0.33
SNX6-209ENST00000557265 PLEKHO2Q8TD55 490 aa12.97□□□□□ -0.33
SNX6-209ENST00000557265 JAKMIP2Q96AA8 810 aa12.97□□□□□ -0.33
SNX6-209ENST00000557265 P2RY11Q96G91 374 aa12.97□□□□□ -0.33
SNX6-209ENST00000557265 MKRN2Q9H000 416 aaKnown RBP12.97□□□□□ -0.33
SNX6-209ENST00000557265 TM7SF3Q9NS93 570 aa12.97□□□□□ -0.33
SNX6-209ENST00000557265 FAM49BQ9NUQ9 324 aa12.97□□□□□ -0.33
SNX6-209ENST00000557265 KIAA1522Q9P206 1035 aaPredicted RBP12.97□□□□□ -0.33
SNX6-209ENST00000557265 USP36Q9P275 1121 aaKnown RBP12.97□□□□□ -0.33
SNX6-209ENST00000557265 SCML2Q9UQR0 700 aa12.97□□□□□ -0.33
SNX6-209ENST00000557265 MORC2Q9Y6X9 1032 aaPredicted RBP12.97□□□□□ -0.33
SNX6-209ENST00000557265 PLXND1Q9Y4D7 1925 aa12.96□□□□□ -0.33
SNX6-209ENST00000557265 METTL12A8MUP2 240 aa12.96□□□□□ -0.33
SNX6-209ENST00000557265 KCNJ18B7U540 433 aa12.96□□□□□ -0.33
SNX6-209ENST00000557265 BCAT2O15382 392 aaPredicted RBP12.96□□□□□ -0.33
SNX6-209ENST00000557265 SYNCRIPO60506 623 aaKnown RBP12.96□□□□□ -0.33
SNX6-209ENST00000557265 CILPO75339 1184 aa12.96□□□□□ -0.33
SNX6-209ENST00000557265 VNN1O95497 513 aa12.96□□□□□ -0.33
SNX6-209ENST00000557265 C4BPAP04003 597 aaKnown RBP12.96□□□□□ -0.33
SNX6-209ENST00000557265 RARGP13631 454 aa12.96□□□□□ -0.33
SNX6-209ENST00000557265 SYT1P21579 422 aa12.96□□□□□ -0.33
SNX6-209ENST00000557265 MATKP42679 507 aa12.96□□□□□ -0.33
SNX6-209ENST00000557265 IL12RB1P42701 662 aa12.96□□□□□ -0.33
SNX6-209ENST00000557265 PLA2G4AP47712 749 aa12.96□□□□□ -0.33
SNX6-209ENST00000557265 TPMTP51580 245 aa12.96□□□□□ -0.33
SNX6-209ENST00000557265 NDST1P52848 882 aa12.96□□□□□ -0.33
SNX6-209ENST00000557265 CUL4AQ13619 759 aa12.96□□□□□ -0.33
SNX6-209ENST00000557265 BMT2Q1RMZ1 405 aa12.96□□□□□ -0.33
SNX6-209ENST00000557265 HLA-BQ31612 363 aa12.96□□□□□ -0.33
SNX6-209ENST00000557265 C10orf120Q5SQS8 335 aa12.96□□□□□ -0.33
SNX6-209ENST00000557265 DCAF12L1Q5VU92 463 aa12.96□□□□□ -0.33
SNX6-209ENST00000557265 Q6ZNB5 142 aa12.96□□□□□ -0.33
SNX6-209ENST00000557265 TMPRSS6Q8IU80 811 aa12.96□□□□□ -0.33
SNX6-209ENST00000557265 CRYBG2Q8N1P7 616 aa12.96□□□□□ -0.33
SNX6-209ENST00000557265 DHX58Q96C10 678 aa12.96□□□□□ -0.33
SNX6-209ENST00000557265 LRIG1Q96JA1 1093 aa12.96□□□□□ -0.33
SNX6-209ENST00000557265 CUEDC2Q9H467 287 aa12.96□□□□□ -0.33
SNX6-209ENST00000557265 NMUR1Q9HB89 426 aa12.96□□□□□ -0.33
SNX6-209ENST00000557265 THAP10Q9P2Z0 257 aaPredicted RBP12.96□□□□□ -0.33
SNX6-209ENST00000557265 HMGXB4Q9UGU5 601 aa12.96□□□□□ -0.33
SNX6-209ENST00000557265 DNMT3LQ9UJW3 386 aa12.96□□□□□ -0.33
SNX6-209ENST00000557265 FBXO10Q9UK96 956 aa12.96□□□□□ -0.33
SNX6-209ENST00000557265 FNDC3AQ9Y2H6 1198 aaKnown RBP12.96□□□□□ -0.33
SNX6-209ENST00000557265 ACACAQ13085 2346 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms