RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 ZNF516Q92618 1163 aa9.55□□□□□ -0.88
HNRNPC-227ENST00000556897 BHMTQ93088 406 aa9.55□□□□□ -0.88
HNRNPC-227ENST00000556897 SMARCD1Q96GM5 515 aa9.55□□□□□ -0.88
HNRNPC-227ENST00000556897 TOE1Q96GM8 510 aaKnown RBP9.55□□□□□ -0.88
HNRNPC-227ENST00000556897 XPO6Q96QU8 1125 aaKnown RBP9.55□□□□□ -0.88
HNRNPC-227ENST00000556897 ZDHHC5Q9C0B5 715 aa9.55□□□□□ -0.88
HNRNPC-227ENST00000556897 MIR1-1HGQ9H1L0 117 aa9.55□□□□□ -0.88
HNRNPC-227ENST00000556897 SMYD3Q9H7B4 428 aa9.55□□□□□ -0.88
HNRNPC-227ENST00000556897 AGPAT3Q9NRZ7 376 aa9.55□□□□□ -0.88
HNRNPC-227ENST00000556897 KRT82Q9NSB4 513 aa9.55□□□□□ -0.88
HNRNPC-227ENST00000556897 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.55□□□□□ -0.88
HNRNPC-227ENST00000556897 ATP8B3O60423 1300 aa9.55□□□□□ -0.88
HNRNPC-227ENST00000556897 KNTC1P50748 2209 aa9.54□□□□□ -0.88
HNRNPC-227ENST00000556897 A0A1B0GTW7 788 aa9.54□□□□□ -0.88
HNRNPC-227ENST00000556897 TGFB1I1O43294 461 aa9.54□□□□□ -0.88
HNRNPC-227ENST00000556897 AP1G2O75843 785 aa9.54□□□□□ -0.88
HNRNPC-227ENST00000556897 BEST1O76090 585 aa9.54□□□□□ -0.88
HNRNPC-227ENST00000556897 CLSTN1O94985 981 aa9.54□□□□□ -0.88
HNRNPC-227ENST00000556897 STAU1O95793 577 aaKnown RBP9.54□□□□□ -0.88
HNRNPC-227ENST00000556897 CISD3P0C7P0 127 aa9.54□□□□□ -0.88
HNRNPC-227ENST00000556897 NCAM1P13591 858 aa9.54□□□□□ -0.88
HNRNPC-227ENST00000556897 DGKGP49619 791 aa9.54□□□□□ -0.88
HNRNPC-227ENST00000556897 FUT11Q495W5 492 aa9.54□□□□□ -0.88
HNRNPC-227ENST00000556897 C8orf34Q49A92 452 aa9.54□□□□□ -0.88
HNRNPC-227ENST00000556897 MARCH9Q86YJ5 346 aa9.54□□□□□ -0.88
HNRNPC-227ENST00000556897 FUKQ8N0W3 1084 aa9.54□□□□□ -0.88
HNRNPC-227ENST00000556897 ZMIZ2Q8NF64 920 aa9.54□□□□□ -0.88
HNRNPC-227ENST00000556897 DNASE2BQ8WZ79 361 aa9.54□□□□□ -0.88
HNRNPC-227ENST00000556897 SYAP1Q96A49 352 aaPredicted RBP9.54□□□□□ -0.88
HNRNPC-227ENST00000556897 ELMO3Q96BJ8 720 aa9.54□□□□□ -0.88
HNRNPC-227ENST00000556897 LRIG1Q96JA1 1093 aa9.54□□□□□ -0.88
HNRNPC-227ENST00000556897 BBC3Q96PG8 261 aaPredicted RBP9.54□□□□□ -0.88
HNRNPC-227ENST00000556897 GPR174Q9BXC1 333 aa9.54□□□□□ -0.88
HNRNPC-227ENST00000556897 KLF16Q9BXK1 252 aaPredicted RBP9.54□□□□□ -0.88
HNRNPC-227ENST00000556897 MKRN2Q9H000 416 aaKnown RBP9.54□□□□□ -0.88
HNRNPC-227ENST00000556897 GZF1Q9H116 711 aaPredicted RBP9.54□□□□□ -0.88
HNRNPC-227ENST00000556897 GAREM1Q9H706 876 aa9.54□□□□□ -0.88
HNRNPC-227ENST00000556897 PLK2Q9NYY3 685 aa9.54□□□□□ -0.88
HNRNPC-227ENST00000556897 MARK1Q9P0L2 795 aa9.54□□□□□ -0.88
HNRNPC-227ENST00000556897 WDR35Q9P2L0 1181 aa9.54□□□□□ -0.88
HNRNPC-227ENST00000556897 FNDC3AQ9Y2H6 1198 aaKnown RBP9.54□□□□□ -0.88
HNRNPC-227ENST00000556897 STON1Q9Y6Q2 735 aa9.54□□□□□ -0.88
HNRNPC-227ENST00000556897 HELZ2Q9BYK8 2649 aaKnown RBP9.54□□□□□ -0.88
HNRNPC-227ENST00000556897 PTPRBP23467 1997 aa9.54□□□□□ -0.88
HNRNPC-227ENST00000556897 SETXQ7Z333 2677 aaKnown RBP9.53□□□□□ -0.88
HNRNPC-227ENST00000556897 KCNJ18B7U540 433 aa9.53□□□□□ -0.88
HNRNPC-227ENST00000556897 GFRA2O00451 464 aa9.53□□□□□ -0.88
HNRNPC-227ENST00000556897 CLIC2O15247 247 aa9.53□□□□□ -0.88
HNRNPC-227ENST00000556897 BCAT2O15382 392 aaPredicted RBP9.53□□□□□ -0.88
HNRNPC-227ENST00000556897 PHACTR2O75167 634 aa9.53□□□□□ -0.88
HNRNPC-227ENST00000556897 CILPO75339 1184 aa9.53□□□□□ -0.88
HNRNPC-227ENST00000556897 ATXN1LP0C7T5 689 aaKnown RBP9.53□□□□□ -0.88
HNRNPC-227ENST00000556897 CCDC130P13994 396 aa9.53□□□□□ -0.88
HNRNPC-227ENST00000556897 CD44P16070 742 aaKnown RBP9.53□□□□□ -0.88
HNRNPC-227ENST00000556897 ATICP31939 592 aa9.53□□□□□ -0.88
HNRNPC-227ENST00000556897 ATP5C1P36542 298 aaKnown RBP9.53□□□□□ -0.88
HNRNPC-227ENST00000556897 CASP4P49662 377 aa9.53□□□□□ -0.88
HNRNPC-227ENST00000556897 GOLGA8FQ08AF8 430 aa9.53□□□□□ -0.88
HNRNPC-227ENST00000556897 GOLGA8DPQ0D2H9 430 aa9.53□□□□□ -0.88
HNRNPC-227ENST00000556897 ORC1Q13415 861 aa9.53□□□□□ -0.88
HNRNPC-227ENST00000556897 BIRC3Q13489 604 aa9.53□□□□□ -0.88
HNRNPC-227ENST00000556897 STARD3Q14849 445 aa9.53□□□□□ -0.88
HNRNPC-227ENST00000556897 HLA-BQ31612 363 aa9.53□□□□□ -0.88
HNRNPC-227ENST00000556897 ZNF699Q32M78 642 aa9.53□□□□□ -0.88
HNRNPC-227ENST00000556897 DCAF12L1Q5VU92 463 aa9.53□□□□□ -0.88
HNRNPC-227ENST00000556897 SCARA5Q6ZMJ2 495 aa9.53□□□□□ -0.88
HNRNPC-227ENST00000556897 EPM2AIP1Q7L775 607 aaPredicted RBP9.53□□□□□ -0.88
HNRNPC-227ENST00000556897 TMPRSS7Q7RTY8 843 aa9.53□□□□□ -0.88
HNRNPC-227ENST00000556897 ACOT1Q86TX2 421 aa9.53□□□□□ -0.88
HNRNPC-227ENST00000556897 NELFCDQ8IXH7 590 aa9.53□□□□□ -0.88
HNRNPC-227ENST00000556897 XXYLT1Q8NBI6 393 aa9.53□□□□□ -0.88
HNRNPC-227ENST00000556897 CADM4Q8NFZ8 388 aa9.53□□□□□ -0.88
HNRNPC-227ENST00000556897 ZNF507Q8TCN5 953 aa9.53□□□□□ -0.88
HNRNPC-227ENST00000556897 SLC2A14Q8TDB8 520 aa9.53□□□□□ -0.88
HNRNPC-227ENST00000556897 P2RY11Q96G91 374 aa9.53□□□□□ -0.88
HNRNPC-227ENST00000556897 TNIP3Q96KP6 325 aa9.53□□□□□ -0.88
HNRNPC-227ENST00000556897 SMOQ99835 787 aa9.53□□□□□ -0.88
HNRNPC-227ENST00000556897 SDCBP2Q9H190 292 aa9.53□□□□□ -0.88
HNRNPC-227ENST00000556897 FBXO44Q9H4M3 255 aa9.53□□□□□ -0.88
HNRNPC-227ENST00000556897 PRDM16Q9HAZ2 1276 aa9.53□□□□□ -0.88
HNRNPC-227ENST00000556897 CYLDQ9NQC7 956 aa9.53□□□□□ -0.88
HNRNPC-227ENST00000556897 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.53□□□□□ -0.883e-9■■■■■ 40.9
HNRNPC-227ENST00000556897 TLR8Q9NR97 1041 aaKnown RBP9.53□□□□□ -0.88
HNRNPC-227ENST00000556897 TM7SF3Q9NS93 570 aa9.53□□□□□ -0.88
HNRNPC-227ENST00000556897 COMMD8Q9NX08 183 aa9.53□□□□□ -0.88
HNRNPC-227ENST00000556897 OSER1Q9NX31 292 aa9.53□□□□□ -0.88
HNRNPC-227ENST00000556897 TOR4AQ9NXH8 423 aa9.53□□□□□ -0.88
HNRNPC-227ENST00000556897 WSB2Q9NYS7 404 aaPredicted RBP9.53□□□□□ -0.88
HNRNPC-227ENST00000556897 KIAA1522Q9P206 1035 aaPredicted RBP9.53□□□□□ -0.88
HNRNPC-227ENST00000556897 USP36Q9P275 1121 aaKnown RBP9.53□□□□□ -0.88
HNRNPC-227ENST00000556897 LSM7Q9UK45 103 aaKnown RBP9.53□□□□□ -0.88
HNRNPC-227ENST00000556897 NUDT5Q9UKK9 219 aa9.53□□□□□ -0.88
HNRNPC-227ENST00000556897 NFE2L3Q9Y4A8 694 aa9.53□□□□□ -0.88
HNRNPC-227ENST00000556897 BPTFQ12830 3046 aa9.52□□□□□ -0.89
HNRNPC-227ENST00000556897 GOLGA8CPA6NN73 597 aa9.52□□□□□ -0.89
HNRNPC-227ENST00000556897 METTL12A8MUP2 240 aa9.52□□□□□ -0.89
HNRNPC-227ENST00000556897 MDM4O15151 490 aa9.52□□□□□ -0.89
HNRNPC-227ENST00000556897 EIF3DO15371 548 aaKnown RBP eCLIP9.52□□□□□ -0.89
HNRNPC-227ENST00000556897 CYP26A1O43174 497 aa9.52□□□□□ -0.89
HNRNPC-227ENST00000556897 CER1O95813 267 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms