RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 GAB4Q2WGN9 574 aa23.95■■□□□ 1.42
TDP1-216ENST00000556867 EXOC4Q96A65 974 aa23.95■■□□□ 1.42
TDP1-216ENST00000556867 ERGIC2Q96RQ1 377 aa23.95■■□□□ 1.42
TDP1-216ENST00000556867 ABCC13Q9NSE7 274 aa23.95■■□□□ 1.42
TDP1-216ENST00000556867 FAM207AQ9NSI2 230 aaPredicted RBP23.95■■□□□ 1.42
TDP1-216ENST00000556867 MARCH2Q9P0N8 246 aa23.95■■□□□ 1.42
TDP1-216ENST00000556867 STRIP2Q9ULQ0 834 aa23.95■■□□□ 1.42
TDP1-216ENST00000556867 STC2O76061 302 aa23.94■■□□□ 1.42
TDP1-216ENST00000556867 ADH1CP00326 375 aa23.94■■□□□ 1.42
TDP1-216ENST00000556867 COG7P83436 770 aa23.94■■□□□ 1.42
TDP1-216ENST00000556867 UBXN1Q04323 297 aa23.94■■□□□ 1.42
TDP1-216ENST00000556867 GRSF1Q12849 480 aaKnown RBP eCLIP23.94■■□□□ 1.42
TDP1-216ENST00000556867 PDCLQ13371 301 aa23.94■■□□□ 1.42
TDP1-216ENST00000556867 IQCB1Q15051 598 aa23.94■■□□□ 1.42
TDP1-216ENST00000556867 FSTL4Q6MZW2 842 aa23.94■■□□□ 1.42
TDP1-216ENST00000556867 RHBDF2Q6PJF5 856 aa23.94■■□□□ 1.42
TDP1-216ENST00000556867 Q6ZNB5 142 aa23.94■■□□□ 1.42
TDP1-216ENST00000556867 TMEM110Q86TL2 294 aa23.94■■□□□ 1.42
TDP1-216ENST00000556867 CLEC4CQ8WTT0 213 aa23.94■■□□□ 1.42
TDP1-216ENST00000556867 P2RY13Q9BPV8 354 aa23.94■■□□□ 1.42
TDP1-216ENST00000556867 LHX5Q9H2C1 402 aa23.94■■□□□ 1.42
TDP1-216ENST00000556867 ST7Q9NRC1 585 aa23.94■■□□□ 1.42
TDP1-216ENST00000556867 RBM12Q9NTZ6 932 aaKnown RBP23.94■■□□□ 1.42
TDP1-216ENST00000556867 SPATA6Q9NWH7 488 aaPredicted RBP23.94■■□□□ 1.42
TDP1-216ENST00000556867 H0Y858 1186 aa23.93■■□□□ 1.42
TDP1-216ENST00000556867 EPHB6O15197 1021 aa23.93■■□□□ 1.42
TDP1-216ENST00000556867 SART1O43290 800 aaKnown RBP23.93■■□□□ 1.42
TDP1-216ENST00000556867 LTFP02788 710 aa23.93■■□□□ 1.42
TDP1-216ENST00000556867 NHLH1Q02575 133 aa23.93■■□□□ 1.42
TDP1-216ENST00000556867 NAIF1Q69YI7 327 aaPredicted RBP23.93■■□□□ 1.42
TDP1-216ENST00000556867 MSANTD2Q6P1R3 559 aa23.93■■□□□ 1.42
TDP1-216ENST00000556867 MAMSTRQ6ZN01 415 aa23.93■■□□□ 1.42
TDP1-216ENST00000556867 SYNPOQ8N3V7 929 aa23.93■■□□□ 1.42
TDP1-216ENST00000556867 RNF139Q8WU17 664 aa23.93■■□□□ 1.42
TDP1-216ENST00000556867 EDEM1Q92611 657 aa23.93■■□□□ 1.42
TDP1-216ENST00000556867 CD101Q93033 1021 aa23.93■■□□□ 1.42
TDP1-216ENST00000556867 MIS12Q9H081 205 aa23.93■■□□□ 1.42
TDP1-216ENST00000556867 E5RJQ4 531 aa23.92■■□□□ 1.42
TDP1-216ENST00000556867 ADH5P11766 374 aa23.92■■□□□ 1.42
TDP1-216ENST00000556867 CYP11B1P15538 503 aa23.92■■□□□ 1.42
TDP1-216ENST00000556867 DRD1P21728 446 aa23.92■■□□□ 1.42
TDP1-216ENST00000556867 KRT9P35527 623 aa23.92■■□□□ 1.42
TDP1-216ENST00000556867 OPRD1P41143 372 aa23.92■■□□□ 1.42
TDP1-216ENST00000556867 GALK1P51570 392 aa23.92■■□□□ 1.42
TDP1-216ENST00000556867 POLR2FP61218 127 aaKnown RBP23.92■■□□□ 1.42
TDP1-216ENST00000556867 MTAPQ13126 283 aa23.92■■□□□ 1.42
TDP1-216ENST00000556867 ZSCAN23Q3MJ62 389 aa23.92■■□□□ 1.42
TDP1-216ENST00000556867 LY6G5CQ5SRR4 150 aa23.92■■□□□ 1.42
TDP1-216ENST00000556867 PASD1Q8IV76 773 aa23.92■■□□□ 1.42
TDP1-216ENST00000556867 WDTC1Q8N5D0 677 aa23.92■■□□□ 1.42
TDP1-216ENST00000556867 GOLGA1Q92805 767 aa23.92■■□□□ 1.42
TDP1-216ENST00000556867 FBRSL1Q9HCM7 1045 aaKnown RBP23.92■■□□□ 1.42
TDP1-216ENST00000556867 KIAA1549LQ6ZVL6 1849 aa23.91■■□□□ 1.42
TDP1-216ENST00000556867 SLC12A8A0AV02 714 aa23.91■■□□□ 1.42
TDP1-216ENST00000556867 HOXC11O43248 304 aaPredicted RBP23.91■■□□□ 1.42
TDP1-216ENST00000556867 LAMTOR5O43504 91 aa23.91■■□□□ 1.42
TDP1-216ENST00000556867 JAM2P57087 298 aa23.91■■□□□ 1.42
TDP1-216ENST00000556867 SCUBE3Q8IX30 993 aa23.91■■□□□ 1.42
TDP1-216ENST00000556867 MAML2Q8IZL2 1156 aaPredicted RBP23.91■■□□□ 1.42
TDP1-216ENST00000556867 NEK11Q8NG66 645 aa23.91■■□□□ 1.42
TDP1-216ENST00000556867 PLD4Q96BZ4 506 aa23.91■■□□□ 1.42
TDP1-216ENST00000556867 DCLK3Q9C098 648 aa23.91■■□□□ 1.42
TDP1-216ENST00000556867 SPHK2Q9NRA0 654 aa23.91■■□□□ 1.42
TDP1-216ENST00000556867 ZNF510Q9Y2H8 683 aa23.91■■□□□ 1.42
TDP1-216ENST00000556867 HBS1LQ9Y450 684 aaKnown RBP23.91■■□□□ 1.42
TDP1-216ENST00000556867 CEP83Q9Y592 693 aa23.91■■□□□ 1.42
TDP1-216ENST00000556867 PAPSS1O43252 624 aaPredicted RBP23.9■■□□□ 1.42
TDP1-216ENST00000556867 CAVIN2O95810 425 aa23.9■■□□□ 1.42
TDP1-216ENST00000556867 KLKB1P03952 638 aa23.9■■□□□ 1.42
TDP1-216ENST00000556867 PLA2G5P39877 138 aa23.9■■□□□ 1.42
TDP1-216ENST00000556867 EIF2DP41214 584 aaKnown RBP23.9■■□□□ 1.42
TDP1-216ENST00000556867 GAD2Q05329 585 aa23.9■■□□□ 1.42
TDP1-216ENST00000556867 GAS6Q14393 721 aa23.9■■□□□ 1.42
TDP1-216ENST00000556867 Q6ZS52 159 aa23.9■■□□□ 1.42
TDP1-216ENST00000556867 BEND5Q7L4P6 421 aa23.9■■□□□ 1.42
TDP1-216ENST00000556867 FMNL3Q8IVF7 1028 aa23.9■■□□□ 1.42
TDP1-216ENST00000556867 C1orf131Q8NDD1 294 aaKnown RBP23.9■■□□□ 1.42
TDP1-216ENST00000556867 DDX1Q92499 740 aaKnown RBP23.9■■□□□ 1.42
TDP1-216ENST00000556867 PCMTD1Q96MG8 357 aaPredicted RBP23.9■■□□□ 1.42
TDP1-216ENST00000556867 NOX5Q96PH1 765 aa23.9■■□□□ 1.42
TDP1-216ENST00000556867 CPXM1Q96SM3 734 aa23.9■■□□□ 1.42
TDP1-216ENST00000556867 CBX8Q9HC52 389 aa23.9■■□□□ 1.42
TDP1-216ENST00000556867 NLRC4Q9NPP4 1024 aa23.9■■□□□ 1.42
TDP1-216ENST00000556867 RTN4Q9NQC3 1192 aaKnown RBP23.9■■□□□ 1.42
TDP1-216ENST00000556867 PRMT8Q9NR22 394 aaPredicted RBP23.9■■□□□ 1.42
TDP1-216ENST00000556867 FBXO4Q9UKT5 387 aa23.9■■□□□ 1.42
TDP1-216ENST00000556867 EGFP01133 1207 aa23.89■■□□□ 1.41
TDP1-216ENST00000556867 HMBSP08397 361 aa23.89■■□□□ 1.41
TDP1-216ENST00000556867 CORO1AP31146 461 aaKnown RBP23.89■■□□□ 1.41
TDP1-216ENST00000556867 TRIP4Q15650 581 aaPredicted RBP23.89■■□□□ 1.41
TDP1-216ENST00000556867 FBXO43Q4G163 708 aa23.89■■□□□ 1.41
TDP1-216ENST00000556867 TMEM25Q86YD3 366 aa23.89■■□□□ 1.41
TDP1-216ENST00000556867 SPEM1Q8N4L4 309 aa23.89■■□□□ 1.41
TDP1-216ENST00000556867 EPS8L1Q8TE68 723 aa23.89■■□□□ 1.41
TDP1-216ENST00000556867 FAM122AQ96E09 287 aa23.89■■□□□ 1.41
TDP1-216ENST00000556867 PPP1R13BQ96KQ4 1090 aa23.89■■□□□ 1.41
TDP1-216ENST00000556867 SPAG5Q96R06 1193 aa23.89■■□□□ 1.41
TDP1-216ENST00000556867 TRIM62Q9BVG3 475 aa23.89■■□□□ 1.41
TDP1-216ENST00000556867 MARK1Q9P0L2 795 aa23.89■■□□□ 1.41
TDP1-216ENST00000556867 TJP2Q9UDY2 1190 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms