RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 SMARCD1Q96GM5 515 aa19.05■□□□□ 0.64
SDR39U1-220ENST00000556548 ACBD6Q9BR61 282 aa19.05■□□□□ 0.64
SDR39U1-220ENST00000556548 FRMD8P1Q9BZ68 369 aaPredicted RBP19.05■□□□□ 0.64
SDR39U1-220ENST00000556548 SAYSD1Q9NPB0 183 aa19.05■□□□□ 0.64
SDR39U1-220ENST00000556548 MTMR10Q9NXD2 777 aa19.05■□□□□ 0.64
SDR39U1-220ENST00000556548 PHF24Q9UPV7 400 aa19.05■□□□□ 0.64
SDR39U1-220ENST00000556548 MFHAS1Q9Y4C4 1052 aa19.05■□□□□ 0.64
SDR39U1-220ENST00000556548 M0QZQ0 153 aa19.05■□□□□ 0.64
SDR39U1-220ENST00000556548 NBNO60934 754 aa19.05■□□□□ 0.64
SDR39U1-220ENST00000556548 BANF1O75531 89 aa19.05■□□□□ 0.64
SDR39U1-220ENST00000556548 TTC4O95801 387 aa19.05■□□□□ 0.64
SDR39U1-220ENST00000556548 FYNP06241 537 aa19.05■□□□□ 0.64
SDR39U1-220ENST00000556548 OR4Q2P0C623 313 aa19.05■□□□□ 0.64
SDR39U1-220ENST00000556548 MTFR1Q15390 333 aa19.05■□□□□ 0.64
SDR39U1-220ENST00000556548 NOMO2Q5JPE7 1267 aa19.05■□□□□ 0.64
SDR39U1-220ENST00000556548 ANKRD22Q5VYY1 191 aa19.05■□□□□ 0.64
SDR39U1-220ENST00000556548 STRADAQ7RTN6 431 aa19.05■□□□□ 0.64
SDR39U1-220ENST00000556548 SLC7A14Q8TBB6 771 aa19.05■□□□□ 0.64
SDR39U1-220ENST00000556548 EDEM1Q92611 657 aa19.05■□□□□ 0.64
SDR39U1-220ENST00000556548 POPDC2Q9HBU9 364 aa19.05■□□□□ 0.64
SDR39U1-220ENST00000556548 EOMESO95936 686 aa19.04■□□□□ 0.64
SDR39U1-220ENST00000556548 GOT1P17174 413 aa19.04■□□□□ 0.64
SDR39U1-220ENST00000556548 NOS2P35228 1153 aa19.04■□□□□ 0.64
SDR39U1-220ENST00000556548 GTF2A1P52655 376 aaPredicted RBP19.04■□□□□ 0.64
SDR39U1-220ENST00000556548 DAOAP59103 153 aa19.04■□□□□ 0.64
SDR39U1-220ENST00000556548 GNGT1P63211 74 aa19.04■□□□□ 0.64
SDR39U1-220ENST00000556548 GUCY1A3Q02108 690 aa19.04■□□□□ 0.64
SDR39U1-220ENST00000556548 IFRD2Q12894 506 aaPredicted RBP19.04■□□□□ 0.64
SDR39U1-220ENST00000556548 FASTKD3Q14CZ7 662 aaKnown RBP19.04■□□□□ 0.64
SDR39U1-220ENST00000556548 DPYSL2Q16555 572 aa19.04■□□□□ 0.64
SDR39U1-220ENST00000556548 CAPN12Q6ZSI9 719 aa19.04■□□□□ 0.64
SDR39U1-220ENST00000556548 HOOK3Q86VS8 718 aa19.04■□□□□ 0.64
SDR39U1-220ENST00000556548 DBF4BQ8NFT6 615 aa19.04■□□□□ 0.64
SDR39U1-220ENST00000556548 UROC1Q96N76 676 aa19.04■□□□□ 0.64
SDR39U1-220ENST00000556548 DEFB118Q96PH6 123 aa19.04■□□□□ 0.64
SDR39U1-220ENST00000556548 ZNF670Q9BS34 389 aa19.04■□□□□ 0.64
SDR39U1-220ENST00000556548 NRDE2Q9H7Z3 1164 aa19.04■□□□□ 0.64
SDR39U1-220ENST00000556548 HHLA1C9JL84 531 aa19.03■□□□□ 0.64
SDR39U1-220ENST00000556548 CYP11A1P05108 521 aa19.03■□□□□ 0.64
SDR39U1-220ENST00000556548 NCAM1P13591 858 aa19.03■□□□□ 0.64
SDR39U1-220ENST00000556548 SELPP16109 830 aa19.03■□□□□ 0.64
SDR39U1-220ENST00000556548 GATMP50440 423 aa19.03■□□□□ 0.64
SDR39U1-220ENST00000556548 GBE1Q04446 702 aa19.03■□□□□ 0.64
SDR39U1-220ENST00000556548 ARHGEF6Q15052 776 aa19.03■□□□□ 0.64
SDR39U1-220ENST00000556548 FAM171BQ6P995 826 aa19.03■□□□□ 0.64
SDR39U1-220ENST00000556548 KDM7AQ6ZMT4 941 aa19.03■□□□□ 0.64
SDR39U1-220ENST00000556548 SUSD3Q96L08 255 aa19.03■□□□□ 0.64
SDR39U1-220ENST00000556548 NCAPGQ9BPX3 1015 aa19.03■□□□□ 0.64
SDR39U1-220ENST00000556548 PIGVQ9NUD9 493 aa19.03■□□□□ 0.64
SDR39U1-220ENST00000556548 ETNK2Q9NVF9 386 aa19.03■□□□□ 0.64
SDR39U1-220ENST00000556548 TBC1D13Q9NVG8 400 aa19.03■□□□□ 0.64
SDR39U1-220ENST00000556548 CWC15Q9P013 229 aaKnown RBP19.03■□□□□ 0.64
SDR39U1-220ENST00000556548 TCRBV7S3A2A0A539 114 aa19.03■□□□□ 0.64
SDR39U1-220ENST00000556548 KCNN4O15554 427 aa19.03■□□□□ 0.64
SDR39U1-220ENST00000556548 PQBP1O60828 265 aaKnown RBP19.03■□□□□ 0.64
SDR39U1-220ENST00000556548 AMPD1P23109 780 aa19.03■□□□□ 0.64
SDR39U1-220ENST00000556548 MAGEA4P43358 317 aa19.03■□□□□ 0.64
SDR39U1-220ENST00000556548 IFI35P80217 286 aaPredicted RBP19.03■□□□□ 0.64
SDR39U1-220ENST00000556548 BASP1P80723 227 aaKnown RBP19.03■□□□□ 0.64
SDR39U1-220ENST00000556548 DEUP1Q05D60 604 aa19.03■□□□□ 0.64
SDR39U1-220ENST00000556548 GPNMBQ14956 572 aa19.03■□□□□ 0.64
SDR39U1-220ENST00000556548 MORF4L2Q15014 288 aa19.03■□□□□ 0.64
SDR39U1-220ENST00000556548 AGBL2Q5U5Z8 902 aa19.03■□□□□ 0.64
SDR39U1-220ENST00000556548 SLC9A4Q6AI14 798 aa19.03■□□□□ 0.64
SDR39U1-220ENST00000556548 ZNF784Q8NCA9 323 aaPredicted RBP19.03■□□□□ 0.64
SDR39U1-220ENST00000556548 CPT1BQ92523 772 aa19.03■□□□□ 0.64
SDR39U1-220ENST00000556548 CSPG4P5Q96PW8 444 aa19.03■□□□□ 0.64
SDR39U1-220ENST00000556548 NPY6RQ99463 290 aa19.03■□□□□ 0.64
SDR39U1-220ENST00000556548 FZD10Q9ULW2 581 aa19.03■□□□□ 0.64
SDR39U1-220ENST00000556548 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.03■□□□□ 0.64
SDR39U1-220ENST00000556548 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.03■□□□□ 0.64
SDR39U1-220ENST00000556548 RASGRF2O14827 1237 aa19.02■□□□□ 0.64
SDR39U1-220ENST00000556548 RGS16O15492 202 aaPredicted RBP19.02■□□□□ 0.64
SDR39U1-220ENST00000556548 ZBED1O96006 694 aa19.02■□□□□ 0.64
SDR39U1-220ENST00000556548 RBL1P28749 1068 aa19.02■□□□□ 0.64
SDR39U1-220ENST00000556548 ATN1P54259 1190 aaPredicted RBP19.02■□□□□ 0.64
SDR39U1-220ENST00000556548 FAM189BP81408 668 aa19.02■□□□□ 0.64
SDR39U1-220ENST00000556548 YWHAHQ04917 246 aaPredicted RBP19.02■□□□□ 0.64
SDR39U1-220ENST00000556548 SLC10A2Q12908 348 aaPredicted RBP19.02■□□□□ 0.64
SDR39U1-220ENST00000556548 THEM5Q8N1Q8 247 aa19.02■□□□□ 0.64
SDR39U1-220ENST00000556548 URGCPQ8TCY9 931 aa19.02■□□□□ 0.64
SDR39U1-220ENST00000556548 PRCCQ92733 491 aaPredicted RBP19.02■□□□□ 0.64
SDR39U1-220ENST00000556548 SLC2A13Q96QE2 648 aa19.02■□□□□ 0.64
SDR39U1-220ENST00000556548 DSEQ9UL01 958 aa19.02■□□□□ 0.64
SDR39U1-220ENST00000556548 STAP1Q9ULZ2 295 aa19.02■□□□□ 0.64
SDR39U1-220ENST00000556548 MYO1CO00159 1063 aa19.02■□□□□ 0.64
SDR39U1-220ENST00000556548 IRAK1P51617 712 aa19.02■□□□□ 0.64
SDR39U1-220ENST00000556548 RAB41Q5JT25 222 aa19.02■□□□□ 0.64
SDR39U1-220ENST00000556548 FAM126BQ8IXS8 530 aa19.02■□□□□ 0.64
SDR39U1-220ENST00000556548 SCAMP5Q8TAC9 235 aa19.02■□□□□ 0.64
SDR39U1-220ENST00000556548 FAM193BQ96PV7 902 aaPredicted RBP19.02■□□□□ 0.64
SDR39U1-220ENST00000556548 CNGB3Q9NQW8 809 aa19.02■□□□□ 0.64
SDR39U1-220ENST00000556548 HCSTQ9UBK5 93 aa19.02■□□□□ 0.64
SDR39U1-220ENST00000556548 NR2E3Q9Y5X4 410 aa19.02■□□□□ 0.64
SDR39U1-220ENST00000556548 CREB3O43889 395 aa19.01■□□□□ 0.63
SDR39U1-220ENST00000556548 FBXO21O94952 628 aa19.01■□□□□ 0.63
SDR39U1-220ENST00000556548 TGM2P21980 687 aa19.01■□□□□ 0.63
SDR39U1-220ENST00000556548 RDXP35241 583 aaKnown RBP19.01■□□□□ 0.63
SDR39U1-220ENST00000556548 CDK7P50613 346 aa19.01■□□□□ 0.63
SDR39U1-220ENST00000556548 SKOR1P84550 965 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms