RNA–Protein interactions for RNA: ENST00000556463.5

MARK3-210, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 3,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-210ENST00000556463 TCF4P15884 667 aa8.87□□□□□ -0.99
MARK3-210ENST00000556463 HOXA10P31260 410 aaPredicted RBP8.87□□□□□ -0.99
MARK3-210ENST00000556463 STT3AP46977 705 aa8.87□□□□□ -0.99
MARK3-210ENST00000556463 ANKRD22Q5VYY1 191 aa8.87□□□□□ -0.99
MARK3-210ENST00000556463 PAOXQ6QHF9 649 aa8.87□□□□□ -0.99
MARK3-210ENST00000556463 MFSD7Q6UXD7 560 aa8.87□□□□□ -0.99
MARK3-210ENST00000556463 RAPH1Q70E73 1250 aa8.87□□□□□ -0.99
MARK3-210ENST00000556463 SH3BP5LQ7L8J4 393 aa8.87□□□□□ -0.99
MARK3-210ENST00000556463 ALYREFQ86V81 257 aaKnown RBP8.87□□□□□ -0.99
MARK3-210ENST00000556463 NIPA2Q8N8Q9 360 aa8.87□□□□□ -0.99
MARK3-210ENST00000556463 TMEM161BQ8NDZ6 487 aa8.87□□□□□ -0.99
MARK3-210ENST00000556463 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.87□□□□□ -0.99
MARK3-210ENST00000556463 PXYLP1Q8TE99 480 aa8.87□□□□□ -0.99
MARK3-210ENST00000556463 RPGRQ92834 1020 aaKnown RBP8.87□□□□□ -0.99
MARK3-210ENST00000556463 SLC35B4Q969S0 331 aa8.87□□□□□ -0.99
MARK3-210ENST00000556463 MRIQ9BWK5 157 aa8.87□□□□□ -0.99
MARK3-210ENST00000556463 TBC1D23Q9NUY8 699 aa8.87□□□□□ -0.99
MARK3-210ENST00000556463 MYH9P35579 1960 aaKnown RBP8.87□□□□□ -0.99
MARK3-210ENST00000556463 FAM237BA0A1B0GVD1 139 aa8.87□□□□□ -0.99
MARK3-210ENST00000556463 ARHGAP10A1A4S6 786 aa8.87□□□□□ -0.99
MARK3-210ENST00000556463 C2orf71A6NGG8 1288 aa8.87□□□□□ -0.99
MARK3-210ENST00000556463 VILLO15195 856 aa8.87□□□□□ -0.99
MARK3-210ENST00000556463 ZNF862O60290 1169 aa8.87□□□□□ -0.99
MARK3-210ENST00000556463 GAS7O60861 476 aa8.87□□□□□ -0.99
MARK3-210ENST00000556463 BANF1O75531 89 aa8.87□□□□□ -0.99
MARK3-210ENST00000556463 MZF1P28698 734 aaPredicted RBP8.87□□□□□ -0.99
MARK3-210ENST00000556463 SSTR1P30872 391 aa8.87□□□□□ -0.99
MARK3-210ENST00000556463 RGS2P41220 211 aa8.87□□□□□ -0.99
MARK3-210ENST00000556463 AP2B1P63010 937 aa8.87□□□□□ -0.99
MARK3-210ENST00000556463 CYP24A1Q07973 514 aa8.87□□□□□ -0.99
MARK3-210ENST00000556463 NFIAQ12857 509 aa8.87□□□□□ -0.99
MARK3-210ENST00000556463 HIF1AQ16665 826 aa8.87□□□□□ -0.99
MARK3-210ENST00000556463 DNAL1Q4LDG9 190 aa8.87□□□□□ -0.99
MARK3-210ENST00000556463 TRIM72Q6ZMU5 477 aa8.87□□□□□ -0.99
MARK3-210ENST00000556463 PPIL6Q8IXY8 311 aa8.87□□□□□ -0.99
MARK3-210ENST00000556463 ZNF516Q92618 1163 aa8.87□□□□□ -0.99
MARK3-210ENST00000556463 KLF6Q99612 283 aaPredicted RBP8.87□□□□□ -0.99
MARK3-210ENST00000556463 FRMD8P1Q9BZ68 369 aaPredicted RBP8.87□□□□□ -0.99
MARK3-210ENST00000556463 VPS37BQ9H9H4 285 aa8.87□□□□□ -0.99
MARK3-210ENST00000556463 NDUFA13Q9P0J0 144 aa8.87□□□□□ -0.99
MARK3-210ENST00000556463 ARHGAP28Q9P2N2 729 aa8.87□□□□□ -0.99
MARK3-210ENST00000556463 TAGLN3Q9UI15 199 aa8.87□□□□□ -0.99
MARK3-210ENST00000556463 SORCS3Q9UPU3 1222 aa8.87□□□□□ -0.99
MARK3-210ENST00000556463 GPC6Q9Y625 555 aaPredicted RBP8.87□□□□□ -0.99
MARK3-210ENST00000556463 ARHGEF35A5YM69 484 aa8.86□□□□□ -0.99
MARK3-210ENST00000556463 UQCRBP14927 111 aa8.86□□□□□ -0.99
MARK3-210ENST00000556463 CD58P19256 250 aa8.86□□□□□ -0.99
MARK3-210ENST00000556463 L1CAMP32004 1257 aa8.86□□□□□ -0.99
MARK3-210ENST00000556463 ECE1P42892 770 aa8.86□□□□□ -0.99
MARK3-210ENST00000556463 YWHAGP61981 247 aaKnown RBP eCLIP8.86□□□□□ -0.99
MARK3-210ENST00000556463 GHRHRQ02643 423 aa8.86□□□□□ -0.99
MARK3-210ENST00000556463 ATP13A4Q4VNC1 1196 aa8.86□□□□□ -0.99
MARK3-210ENST00000556463 SPOCD1Q6ZMY3 1216 aa8.86□□□□□ -0.99
MARK3-210ENST00000556463 ABRAQ8N0Z2 381 aa8.86□□□□□ -0.99
MARK3-210ENST00000556463 UBR7Q8N806 425 aa8.86□□□□□ -0.99
MARK3-210ENST00000556463 NLRP4Q96MN2 994 aa8.86□□□□□ -0.99
MARK3-210ENST00000556463 PRICKLE1Q96MT3 831 aaPredicted RBP8.86□□□□□ -0.99
MARK3-210ENST00000556463 TINF2Q9BSI4 451 aa8.86□□□□□ -0.99
MARK3-210ENST00000556463 MRPL47Q9HD33 250 aaKnown RBP8.86□□□□□ -0.99
MARK3-210ENST00000556463 PCDH12Q9NPG4 1184 aa8.86□□□□□ -0.99
MARK3-210ENST00000556463 PPARGC1AQ9UBK2 798 aaKnown RBP8.86□□□□□ -0.99
MARK3-210ENST00000556463 TMED5Q9Y3A6 229 aa8.86□□□□□ -0.99
MARK3-210ENST00000556463 COL2A1P02458 1487 aaPredicted RBP8.86□□□□□ -0.99
MARK3-210ENST00000556463 SDR42E2A6NKP2 422 aa8.86□□□□□ -0.99
MARK3-210ENST00000556463 SPP2Q13103 211 aa8.86□□□□□ -0.99
MARK3-210ENST00000556463 LPIN1Q14693 890 aa8.86□□□□□ -0.99
MARK3-210ENST00000556463 GPR162Q16538 588 aa8.86□□□□□ -0.99
MARK3-210ENST00000556463 USH1GQ495M9 461 aa8.86□□□□□ -0.99
MARK3-210ENST00000556463 SFT2D3Q587I9 215 aa8.86□□□□□ -0.99
MARK3-210ENST00000556463 CDHR3Q6ZTQ4 885 aa8.86□□□□□ -0.99
MARK3-210ENST00000556463 C3orf62Q6ZUJ4 267 aa8.86□□□□□ -0.99
MARK3-210ENST00000556463 FASTKD5Q7L8L6 764 aaKnown RBP8.86□□□□□ -0.99
MARK3-210ENST00000556463 OR6Y1Q8NGX8 325 aa8.86□□□□□ -0.99
MARK3-210ENST00000556463 FEZF2Q8TBJ5 459 aa8.86□□□□□ -0.99
MARK3-210ENST00000556463 IDI2Q9BXS1 227 aa8.86□□□□□ -0.99
MARK3-210ENST00000556463 PLAC1Q9HBJ0 212 aa8.86□□□□□ -0.99
MARK3-210ENST00000556463 PACSIN3Q9UKS6 424 aa8.86□□□□□ -0.99
MARK3-210ENST00000556463 PRR12Q9ULL5 1215 aa8.86□□□□□ -0.99
MARK3-210ENST00000556463 TBX20Q9UMR3 447 aa8.86□□□□□ -0.99
MARK3-210ENST00000556463 DENRO43583 198 aaKnown RBP8.86□□□□□ -0.99
MARK3-210ENST00000556463 PIAS1O75925 651 aa8.86□□□□□ -0.99
MARK3-210ENST00000556463 GSRP00390 522 aa8.86□□□□□ -0.99
MARK3-210ENST00000556463 CD48P09326 243 aa8.86□□□□□ -0.99
MARK3-210ENST00000556463 BGNP21810 368 aa8.86□□□□□ -0.99
MARK3-210ENST00000556463 ENTPD1P49961 510 aa8.86□□□□□ -0.99
MARK3-210ENST00000556463 ZNF132P52740 706 aa8.86□□□□□ -0.99
MARK3-210ENST00000556463 JAG1P78504 1218 aa8.86□□□□□ -0.99
MARK3-210ENST00000556463 MRPS5P82675 430 aaKnown RBP8.86□□□□□ -0.99
MARK3-210ENST00000556463 TMC5Q6UXY8 1006 aa8.86□□□□□ -0.99
MARK3-210ENST00000556463 TMEM179Q6ZVK1 233 aa8.86□□□□□ -0.99
MARK3-210ENST00000556463 NIPA1Q7RTP0 329 aa8.86□□□□□ -0.99
MARK3-210ENST00000556463 NUDCD3Q8IVD9 361 aa8.86□□□□□ -0.99
MARK3-210ENST00000556463 ICA1LQ8NDH6 482 aa8.86□□□□□ -0.99
MARK3-210ENST00000556463 HPS1Q92902 700 aa8.86□□□□□ -0.99
MARK3-210ENST00000556463 DGCR14Q96DF8 476 aaKnown RBP8.86□□□□□ -0.99
MARK3-210ENST00000556463 MTBPQ96DY7 904 aa8.86□□□□□ -0.99
MARK3-210ENST00000556463 TOPORSQ9NS56 1045 aaPredicted RBP8.86□□□□□ -0.99
MARK3-210ENST00000556463 PTTG2Q9NZH5 202 aa8.86□□□□□ -0.99
MARK3-210ENST00000556463 IP6K2Q9UHH9 426 aa8.86□□□□□ -0.99
MARK3-210ENST00000556463 COQ6Q9Y2Z9 468 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms