RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 MAP3K13O43283 966 aa23.78■■□□□ 1.4
ACTN1-220ENST00000556433 RALAP11233 206 aa23.78■■□□□ 1.4
ACTN1-220ENST00000556433 TYRP14679 529 aa23.78■■□□□ 1.4
ACTN1-220ENST00000556433 DHPSP49366 369 aaPredicted RBP23.78■■□□□ 1.4
ACTN1-220ENST00000556433 ZNF658Q5TYW1 1059 aaPredicted RBP23.78■■□□□ 1.4
ACTN1-220ENST00000556433 TCERG1LQ5VWI1 586 aa23.78■■□□□ 1.4
ACTN1-220ENST00000556433 TADA2BQ86TJ2 420 aa23.78■■□□□ 1.4
ACTN1-220ENST00000556433 SLC4A11Q8NBS3 891 aa23.78■■□□□ 1.4
ACTN1-220ENST00000556433 GSDMAQ96QA5 445 aa23.78■■□□□ 1.4
ACTN1-220ENST00000556433 MYO18AQ92614 2054 aaKnown RBP23.78■■□□□ 1.4
ACTN1-220ENST00000556433 CNOT1A5YKK6 2376 aaKnown RBP23.78■■□□□ 1.4
ACTN1-220ENST00000556433 P2RY2P41231 377 aa23.77■■□□□ 1.4
ACTN1-220ENST00000556433 RAD23BP54727 409 aa23.77■■□□□ 1.4
ACTN1-220ENST00000556433 DCAF17Q5H9S7 520 aaPredicted RBP23.77■■□□□ 1.4
ACTN1-220ENST00000556433 ANKRD40Q6AI12 368 aa23.77■■□□□ 1.4
ACTN1-220ENST00000556433 CYP2U1Q7Z449 544 aa23.77■■□□□ 1.4
ACTN1-220ENST00000556433 MIB1Q86YT6 1006 aa23.77■■□□□ 1.4
ACTN1-220ENST00000556433 ZNF276Q8N554 614 aa23.77■■□□□ 1.4
ACTN1-220ENST00000556433 CNTNAP3BQ96NU0 1288 aa23.77■■□□□ 1.4
ACTN1-220ENST00000556433 ARID3AQ99856 593 aa23.77■■□□□ 1.4
ACTN1-220ENST00000556433 CNTNAP3Q9BZ76 1288 aa23.77■■□□□ 1.4
ACTN1-220ENST00000556433 UBXN6Q9BZV1 441 aa23.77■■□□□ 1.4
ACTN1-220ENST00000556433 CLIC5Q9NZA1 410 aa23.77■■□□□ 1.4
ACTN1-220ENST00000556433 MARK1Q9P0L2 795 aa23.77■■□□□ 1.4
ACTN1-220ENST00000556433 HCN2Q9UL51 889 aa23.77■■□□□ 1.4
ACTN1-220ENST00000556433 STARD13Q9Y3M8 1113 aa23.77■■□□□ 1.4
ACTN1-220ENST00000556433 TPRP12270 2363 aaKnown RBP23.76■■□□□ 1.39
ACTN1-220ENST00000556433 KHNYNO15037 678 aaKnown RBP23.76■■□□□ 1.39
ACTN1-220ENST00000556433 CACNG3O60359 315 aa23.76■■□□□ 1.39
ACTN1-220ENST00000556433 SMC2O95347 1197 aa23.76■■□□□ 1.39
ACTN1-220ENST00000556433 WASP42768 502 aa23.76■■□□□ 1.39
ACTN1-220ENST00000556433 FKBP3Q00688 224 aaKnown RBP23.76■■□□□ 1.39
ACTN1-220ENST00000556433 BYSLQ13895 437 aaKnown RBP23.76■■□□□ 1.39
ACTN1-220ENST00000556433 CBWD6Q4V339 395 aa23.76■■□□□ 1.39
ACTN1-220ENST00000556433 CBWD3Q5JTY5 395 aa23.76■■□□□ 1.39
ACTN1-220ENST00000556433 CBWD5Q5RIA9 395 aa23.76■■□□□ 1.39
ACTN1-220ENST00000556433 ARHGAP17Q68EM7 881 aa23.76■■□□□ 1.39
ACTN1-220ENST00000556433 LPCAT2Q7L5N7 544 aa23.76■■□□□ 1.39
ACTN1-220ENST00000556433 FRMD1Q8N878 549 aa23.76■■□□□ 1.39
ACTN1-220ENST00000556433 ERCC4Q92889 916 aaPredicted RBP23.76■■□□□ 1.39
ACTN1-220ENST00000556433 SPACA7Q96KW9 195 aa23.76■■□□□ 1.39
ACTN1-220ENST00000556433 EDEM2Q9BV94 578 aa23.76■■□□□ 1.39
ACTN1-220ENST00000556433 THADAQ6YHU6 1953 aa23.75■■□□□ 1.39
ACTN1-220ENST00000556433 SLC16A3O15427 465 aaKnown RBP23.75■■□□□ 1.39
ACTN1-220ENST00000556433 STC2O76061 302 aa23.75■■□□□ 1.39
ACTN1-220ENST00000556433 NTSR1P30989 418 aa23.75■■□□□ 1.39
ACTN1-220ENST00000556433 MAP7D1Q3KQU3 841 aa23.75■■□□□ 1.39
ACTN1-220ENST00000556433 COBLL1Q53SF7 1204 aa23.75■■□□□ 1.39
ACTN1-220ENST00000556433 Q6ZNB5 142 aa23.75■■□□□ 1.39
ACTN1-220ENST00000556433 PIGZQ86VD9 579 aa23.75■■□□□ 1.39
ACTN1-220ENST00000556433 ENGASEQ8NFI3 743 aa23.75■■□□□ 1.39
ACTN1-220ENST00000556433 PIGKQ92643 395 aa23.75■■□□□ 1.39
ACTN1-220ENST00000556433 SMARCE1Q969G3 411 aa23.75■■□□□ 1.39
ACTN1-220ENST00000556433 CDK5RAP1Q96SZ6 601 aaKnown RBP23.75■■□□□ 1.39
ACTN1-220ENST00000556433 FAM124BQ9H5Z6 455 aaPredicted RBP23.75■■□□□ 1.39
ACTN1-220ENST00000556433 RASAL2Q9UJF2 1139 aa23.75■■□□□ 1.39
ACTN1-220ENST00000556433 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa23.74■■□□□ 1.39
ACTN1-220ENST00000556433 HOXB2P14652 356 aa23.74■■□□□ 1.39
ACTN1-220ENST00000556433 PMS1P54277 932 aaKnown RBP23.74■■□□□ 1.39
ACTN1-220ENST00000556433 SLC8A3P57103 927 aa23.74■■□□□ 1.39
ACTN1-220ENST00000556433 COG7P83436 770 aa23.74■■□□□ 1.39
ACTN1-220ENST00000556433 EFEMP1Q12805 493 aa23.74■■□□□ 1.39
ACTN1-220ENST00000556433 BECN1Q14457 450 aa23.74■■□□□ 1.39
ACTN1-220ENST00000556433 EGFLAMQ63HQ2 1017 aa23.74■■□□□ 1.39
ACTN1-220ENST00000556433 SDE2Q6IQ49 451 aa23.74■■□□□ 1.39
ACTN1-220ENST00000556433 TOGARAM2Q6ZUX3 1019 aa23.74■■□□□ 1.39
ACTN1-220ENST00000556433 TMEFF1Q8IYR6 380 aa23.74■■□□□ 1.39
ACTN1-220ENST00000556433 ARHGAP18Q8N392 663 aa23.74■■□□□ 1.39
ACTN1-220ENST00000556433 ANKRD52Q8NB46 1076 aa23.74■■□□□ 1.39
ACTN1-220ENST00000556433 BHMTQ93088 406 aa23.74■■□□□ 1.39
ACTN1-220ENST00000556433 LSM14BQ9BX40 385 aaKnown RBP23.74■■□□□ 1.39
ACTN1-220ENST00000556433 MBD1Q9UIS9 605 aaPredicted RBP23.74■■□□□ 1.39
ACTN1-220ENST00000556433 ZNF510Q9Y2H8 683 aa23.74■■□□□ 1.39
ACTN1-220ENST00000556433 COQ4Q9Y3A0 265 aa23.74■■□□□ 1.39
ACTN1-220ENST00000556433 C4orf47A7E2U8 309 aa23.73■■□□□ 1.39
ACTN1-220ENST00000556433 KLKB1P03952 638 aa23.73■■□□□ 1.39
ACTN1-220ENST00000556433 HMBSP08397 361 aa23.73■■□□□ 1.39
ACTN1-220ENST00000556433 CISD3P0C7P0 127 aa23.73■■□□□ 1.39
ACTN1-220ENST00000556433 DGKGP49619 791 aa23.73■■□□□ 1.39
ACTN1-220ENST00000556433 NUCB2P80303 420 aa23.73■■□□□ 1.39
ACTN1-220ENST00000556433 ZC3H3Q8IXZ2 948 aaKnown RBP23.73■■□□□ 1.39
ACTN1-220ENST00000556433 CHPFQ8IZ52 775 aa23.73■■□□□ 1.39
ACTN1-220ENST00000556433 SPATA20Q8TB22 786 aa23.73■■□□□ 1.39
ACTN1-220ENST00000556433 ACOX2Q99424 681 aa23.73■■□□□ 1.39
ACTN1-220ENST00000556433 PLK2Q9NYY3 685 aa23.73■■□□□ 1.39
ACTN1-220ENST00000556433 LNP1A1A4G5 178 aa23.72■■□□□ 1.39
ACTN1-220ENST00000556433 TRIM49BA6NDI0 452 aa23.72■■□□□ 1.39
ACTN1-220ENST00000556433 PATE3B3GLJ2 98 aa23.72■■□□□ 1.39
ACTN1-220ENST00000556433 PRRT4C9JH25 899 aa23.72■■□□□ 1.39
ACTN1-220ENST00000556433 ZBTB24O43167 697 aaPredicted RBP23.72■■□□□ 1.39
ACTN1-220ENST00000556433 GABRG2P18507 467 aa23.72■■□□□ 1.39
ACTN1-220ENST00000556433 TKTL1P51854 596 aa23.72■■□□□ 1.39
ACTN1-220ENST00000556433 CUL2Q13617 745 aa23.72■■□□□ 1.39
ACTN1-220ENST00000556433 RAB41Q5JT25 222 aa23.72■■□□□ 1.39
ACTN1-220ENST00000556433 N4BP2L1Q5TBK1 243 aaPredicted RBP23.72■■□□□ 1.39
ACTN1-220ENST00000556433 RSRC2Q7L4I2 434 aaKnown RBP23.72■■□□□ 1.39
ACTN1-220ENST00000556433 ARMCX6Q7L4S7 300 aa23.72■■□□□ 1.39
ACTN1-220ENST00000556433 GTPBP4Q9BZE4 634 aaKnown RBP23.72■■□□□ 1.39
ACTN1-220ENST00000556433 DCLK3Q9C098 648 aa23.72■■□□□ 1.39
ACTN1-220ENST00000556433 ARMCX3Q9UH62 379 aaPredicted RBP23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms