RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 USP6NLQ92738 828 aa15.37■□□□□ 0.05
NEK9-209ENST00000556170 TINF2Q9BSI4 451 aa15.37■□□□□ 0.05
NEK9-209ENST00000556170 PGAP2Q9UHJ9 254 aa15.37■□□□□ 0.05
NEK9-209ENST00000556170 NUDT5Q9UKK9 219 aa15.37■□□□□ 0.05
NEK9-209ENST00000556170 C10orf71Q711Q0 1435 aa15.37■□□□□ 0.05
NEK9-209ENST00000556170 CFLARO15519 480 aa15.37■□□□□ 0.05
NEK9-209ENST00000556170 SKAP2O75563 359 aaPredicted RBP15.37■□□□□ 0.05
NEK9-209ENST00000556170 ATP6V1G2O95670 118 aa15.37■□□□□ 0.05
NEK9-209ENST00000556170 HSPA4LO95757 839 aa15.37■□□□□ 0.05
NEK9-209ENST00000556170 GNAT1P11488 350 aa15.37■□□□□ 0.05
NEK9-209ENST00000556170 PAX7P23759 505 aa15.37■□□□□ 0.05
NEK9-209ENST00000556170 WDR4P57081 412 aaKnown RBP15.37■□□□□ 0.05
NEK9-209ENST00000556170 PTP4A2Q12974 167 aa15.37■□□□□ 0.05
NEK9-209ENST00000556170 STX3Q13277 289 aa15.37■□□□□ 0.05
NEK9-209ENST00000556170 PRPSAP1Q14558 356 aa15.37■□□□□ 0.05
NEK9-209ENST00000556170 EFHC1Q5JVL4 640 aa15.37■□□□□ 0.05
NEK9-209ENST00000556170 CCNYL1Q8N7R7 359 aa15.37■□□□□ 0.05
NEK9-209ENST00000556170 COLGALT1Q8NBJ5 622 aa15.37■□□□□ 0.05
NEK9-209ENST00000556170 NSMCE1Q8WV22 266 aa15.37■□□□□ 0.05
NEK9-209ENST00000556170 NKD2Q969F2 451 aaPredicted RBP15.37■□□□□ 0.05
NEK9-209ENST00000556170 CELF6Q96J87 481 aaKnown RBP15.37■□□□□ 0.05
NEK9-209ENST00000556170 UNKQ9C0B0 810 aaKnown RBP15.37■□□□□ 0.05
NEK9-209ENST00000556170 VTA1Q9NP79 307 aa15.37■□□□□ 0.05
NEK9-209ENST00000556170 IL1RAPL1Q9NZN1 696 aa15.37■□□□□ 0.05
NEK9-209ENST00000556170 COL24A1Q17RW2 1714 aa15.37■□□□□ 0.05
NEK9-209ENST00000556170 FAM200BP0CF97 657 aa15.36■□□□□ 0.05
NEK9-209ENST00000556170 GOT1P17174 413 aa15.36■□□□□ 0.05
NEK9-209ENST00000556170 TPH1P17752 444 aa15.36■□□□□ 0.05
NEK9-209ENST00000556170 CDC25CP30307 473 aa15.36■□□□□ 0.05
NEK9-209ENST00000556170 ZNF157P51786 506 aaPredicted RBP15.36■□□□□ 0.05
NEK9-209ENST00000556170 TKTL1P51854 596 aa15.36■□□□□ 0.05
NEK9-209ENST00000556170 BST2Q10589 180 aaKnown RBP15.36■□□□□ 0.05
NEK9-209ENST00000556170 MECRQ9BV79 373 aa15.36■□□□□ 0.05
NEK9-209ENST00000556170 CYTH4Q9UIA0 394 aa15.36■□□□□ 0.05
NEK9-209ENST00000556170 A0A0G2JLL6 359 aaPredicted RBP15.36■□□□□ 0.05
NEK9-209ENST00000556170 WDR27A2RRH5 827 aa15.36■□□□□ 0.05
NEK9-209ENST00000556170 C2orf71A6NGG8 1288 aa15.36■□□□□ 0.05
NEK9-209ENST00000556170 A8MUI8 341 aa15.36■□□□□ 0.05
NEK9-209ENST00000556170 SERPINB6P35237 376 aa15.36■□□□□ 0.05
NEK9-209ENST00000556170 CA9Q16790 459 aa15.36■□□□□ 0.05
NEK9-209ENST00000556170 PRRT2Q7Z6L0 340 aaPredicted RBP15.36■□□□□ 0.05
NEK9-209ENST00000556170 PIGZQ86VD9 579 aa15.36■□□□□ 0.05
NEK9-209ENST00000556170 ZFP42Q96MM3 310 aa15.36■□□□□ 0.05
NEK9-209ENST00000556170 FAM193BQ96PV7 902 aaPredicted RBP15.36■□□□□ 0.05
NEK9-209ENST00000556170 SRPK1Q96SB4 655 aaKnown RBP15.36■□□□□ 0.05
NEK9-209ENST00000556170 PLEKHA5Q9HAU0 1116 aa15.36■□□□□ 0.05
NEK9-209ENST00000556170 B2RBV5 119 aa15.36■□□□□ 0.05
NEK9-209ENST00000556170 ATP5HO75947 161 aa15.36■□□□□ 0.05
NEK9-209ENST00000556170 GPD2P43304 727 aa15.36■□□□□ 0.05
NEK9-209ENST00000556170 GTF2A2P52657 109 aa15.36■□□□□ 0.05
NEK9-209ENST00000556170 IRX1P78414 480 aaPredicted RBP15.36■□□□□ 0.05
NEK9-209ENST00000556170 SV2CQ496J9 727 aa15.36■□□□□ 0.05
NEK9-209ENST00000556170 MSS51Q4VC12 460 aa15.36■□□□□ 0.05
NEK9-209ENST00000556170 RYBPQ8N488 228 aaPredicted RBP15.36■□□□□ 0.05
NEK9-209ENST00000556170 TRIM56Q9BRZ2 755 aaKnown RBP15.36■□□□□ 0.05
NEK9-209ENST00000556170 XYLT2Q9H1B5 865 aa15.36■□□□□ 0.05
NEK9-209ENST00000556170 LHX5Q9H2C1 402 aa15.36■□□□□ 0.05
NEK9-209ENST00000556170 KRT82Q9NSB4 513 aa15.36■□□□□ 0.05
NEK9-209ENST00000556170 APOBEC2Q9Y235 224 aaKnown RBP15.36■□□□□ 0.05
NEK9-209ENST00000556170 COL2A1P02458 1487 aaPredicted RBP15.35■□□□□ 0.05
NEK9-209ENST00000556170 ANP32DO95626 131 aa15.35■□□□□ 0.05
NEK9-209ENST00000556170 IQCF3P0C7M6 154 aa15.35■□□□□ 0.05
NEK9-209ENST00000556170 IVDP26440 423 aa15.35■□□□□ 0.05
NEK9-209ENST00000556170 SERPINB3P29508 390 aa15.35■□□□□ 0.05
NEK9-209ENST00000556170 MLH1P40692 756 aa15.35■□□□□ 0.05
NEK9-209ENST00000556170 RPL10AP62906 217 aaKnown RBP15.35■□□□□ 0.05
NEK9-209ENST00000556170 KLF1Q13351 362 aaPredicted RBP15.35■□□□□ 0.05
NEK9-209ENST00000556170 SH3D19Q5HYK7 790 aa15.35■□□□□ 0.05
NEK9-209ENST00000556170 WSCD1Q658N2 575 aa15.35■□□□□ 0.05
NEK9-209ENST00000556170 TLK2Q86UE8 772 aa15.35■□□□□ 0.05
NEK9-209ENST00000556170 PYROXD2Q8N2H3 581 aa15.35■□□□□ 0.05
NEK9-209ENST00000556170 L3MBTL3Q96JM7 780 aaPredicted RBP15.35■□□□□ 0.05
NEK9-209ENST00000556170 GAD1Q99259 594 aa15.35■□□□□ 0.05
NEK9-209ENST00000556170 TMEM109Q9BVC6 243 aa15.35■□□□□ 0.05
NEK9-209ENST00000556170 PCDHGC3Q9UN70 934 aa15.35■□□□□ 0.05
NEK9-209ENST00000556170 SRRM3A6NNA2 597 aaPredicted RBP15.35■□□□□ 0.05
NEK9-209ENST00000556170 TSPAN1O60635 241 aa15.35■□□□□ 0.05
NEK9-209ENST00000556170 SMIM24O75264 130 aa15.35■□□□□ 0.05
NEK9-209ENST00000556170 POMCP01189 267 aa15.35■□□□□ 0.05
NEK9-209ENST00000556170 GHRP10912 638 aa15.35■□□□□ 0.05
NEK9-209ENST00000556170 LMO2P25791 158 aa15.35■□□□□ 0.05
NEK9-209ENST00000556170 SERPINB4P48594 390 aa15.35■□□□□ 0.05
NEK9-209ENST00000556170 PCDH18Q9HCL0 1135 aa15.35■□□□□ 0.05
NEK9-209ENST00000556170 DLEC1Q9Y238 1755 aa15.35■□□□□ 0.05
NEK9-209ENST00000556170 NEMP1O14524 444 aa15.35■□□□□ 0.05
NEK9-209ENST00000556170 KRT16P08779 473 aa15.35■□□□□ 0.05
NEK9-209ENST00000556170 PGM1P36871 562 aa15.35■□□□□ 0.05
NEK9-209ENST00000556170 YWHAZP63104 245 aaKnown RBP15.35■□□□□ 0.05
NEK9-209ENST00000556170 POU5F1BQ06416 359 aa15.35■□□□□ 0.05
NEK9-209ENST00000556170 ZNF252P-AS1Q0IIN9 211 aa15.35■□□□□ 0.05
NEK9-209ENST00000556170 GPR142Q7Z601 462 aa15.35■□□□□ 0.05
NEK9-209ENST00000556170 SUGP1Q8IWZ8 645 aaKnown RBP15.35■□□□□ 0.05
NEK9-209ENST00000556170 PLD5Q8N7P1 536 aa15.35■□□□□ 0.05
NEK9-209ENST00000556170 ACSS3Q9H6R3 686 aa15.35■□□□□ 0.05
NEK9-209ENST00000556170 ETNK2Q9NVF9 386 aa15.35■□□□□ 0.05
NEK9-209ENST00000556170 DDX43Q9NXZ2 648 aaKnown RBP15.35■□□□□ 0.05
NEK9-209ENST00000556170 ADAMTS5Q9UNA0 930 aa15.35■□□□□ 0.05
NEK9-209ENST00000556170 BTBD19C9JJ37 291 aa15.34■□□□□ 0.05
NEK9-209ENST00000556170 STRNO43815 780 aa15.34■□□□□ 0.05
NEK9-209ENST00000556170 CSPG5O95196 566 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms