RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 RNASE9P60153 205 aaKnown RBP7.98□□□□□ -1.13
TDP1-214ENST00000556063 SLC7A9P82251 487 aa7.98□□□□□ -1.13
TDP1-214ENST00000556063 CCDC173Q0VFZ6 552 aa7.98□□□□□ -1.13
TDP1-214ENST00000556063 EFEMP1Q12805 493 aa7.98□□□□□ -1.13
TDP1-214ENST00000556063 PTP4A2Q12974 167 aa7.98□□□□□ -1.13
TDP1-214ENST00000556063 MTA1Q13330 715 aa7.98□□□□□ -1.13
TDP1-214ENST00000556063 ASTE1Q2TB18 679 aaPredicted RBP7.98□□□□□ -1.13
TDP1-214ENST00000556063 DCAF6Q58WW2 860 aa7.98□□□□□ -1.13
TDP1-214ENST00000556063 FAM78AQ5JUQ0 283 aa7.98□□□□□ -1.13
TDP1-214ENST00000556063 CC2D1AQ6P1N0 951 aaPredicted RBP7.98□□□□□ -1.13
TDP1-214ENST00000556063 MSANTD2Q6P1R3 559 aa7.98□□□□□ -1.13
TDP1-214ENST00000556063 SND1Q7KZF4 910 aaKnown RBP eCLIP7.98□□□□□ -1.13
TDP1-214ENST00000556063 ADHFE1Q8IWW8 467 aa7.98□□□□□ -1.13
TDP1-214ENST00000556063 YAF2Q8IY57 180 aa7.98□□□□□ -1.13
TDP1-214ENST00000556063 KIAA1958Q8N8K9 716 aa7.98□□□□□ -1.13
TDP1-214ENST00000556063 ARL14EPQ8N8R7 260 aaPredicted RBP7.98□□□□□ -1.13
TDP1-214ENST00000556063 CLEC4CQ8WTT0 213 aa7.98□□□□□ -1.13
TDP1-214ENST00000556063 EDEM1Q92611 657 aa7.98□□□□□ -1.13
TDP1-214ENST00000556063 ASB16Q96NS5 453 aa7.98□□□□□ -1.13
TDP1-214ENST00000556063 SERPINB11Q96P15 392 aa7.98□□□□□ -1.13
TDP1-214ENST00000556063 EIF3CQ99613 913 aaKnown RBP7.98□□□□□ -1.13
TDP1-214ENST00000556063 NCAPGQ9BPX3 1015 aa7.98□□□□□ -1.13
TDP1-214ENST00000556063 DCLK3Q9C098 648 aa7.98□□□□□ -1.13
TDP1-214ENST00000556063 CCSER2Q9H7U1 834 aa7.98□□□□□ -1.13
TDP1-214ENST00000556063 TRPV4Q9HBA0 871 aa7.98□□□□□ -1.13
TDP1-214ENST00000556063 SPTLC3Q9NUV7 552 aa7.98□□□□□ -1.13
TDP1-214ENST00000556063 TDP1Q9NUW8 608 aa7.98□□□□□ -1.13
TDP1-214ENST00000556063 THG1LQ9NWX6 298 aaKnown RBP7.98□□□□□ -1.13
TDP1-214ENST00000556063 TAS2R14Q9NYV8 317 aa7.98□□□□□ -1.13
TDP1-214ENST00000556063 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.98□□□□□ -1.13
TDP1-214ENST00000556063 IGSF9Q9P2J2 1179 aa7.98□□□□□ -1.13
TDP1-214ENST00000556063 TJP2Q9UDY2 1190 aa7.98□□□□□ -1.13
TDP1-214ENST00000556063 LCMT1Q9UIC8 334 aa7.98□□□□□ -1.13
TDP1-214ENST00000556063 RASAL2Q9UJF2 1139 aa7.98□□□□□ -1.13
TDP1-214ENST00000556063 LSM7Q9UK45 103 aaKnown RBP7.98□□□□□ -1.13
TDP1-214ENST00000556063 ARHGAP26Q9UNA1 814 aa7.98□□□□□ -1.13
TDP1-214ENST00000556063 SH3BP1Q9Y3L3 701 aa7.98□□□□□ -1.13
TDP1-214ENST00000556063 HBS1LQ9Y450 684 aaKnown RBP7.98□□□□□ -1.13
TDP1-214ENST00000556063 FARP1Q9Y4F1 1045 aaPredicted RBP7.98□□□□□ -1.13
TDP1-214ENST00000556063 TCF20Q9UGU0 1960 aaKnown RBP7.97□□□□□ -1.13
TDP1-214ENST00000556063 SLC12A8A0AV02 714 aa7.97□□□□□ -1.13
TDP1-214ENST00000556063 FAM170AA1A519 330 aa7.97□□□□□ -1.13
TDP1-214ENST00000556063 SOWAHDA6NJG2 315 aa7.97□□□□□ -1.13
TDP1-214ENST00000556063 C2CD4DB7Z1M9 353 aa7.97□□□□□ -1.13
TDP1-214ENST00000556063 ECI2O75521 394 aa7.97□□□□□ -1.13
TDP1-214ENST00000556063 GRAP2O75791 330 aa7.97□□□□□ -1.13
TDP1-214ENST00000556063 LCA5LO95447 670 aa7.97□□□□□ -1.13
TDP1-214ENST00000556063 TRUB2O95900 331 aaKnown RBP7.97□□□□□ -1.13
TDP1-214ENST00000556063 TMEM253P0C7T8 217 aa7.97□□□□□ -1.13
TDP1-214ENST00000556063 TCF3P15923 654 aa7.97□□□□□ -1.13
TDP1-214ENST00000556063 PDGFRAP16234 1089 aa7.97□□□□□ -1.13
TDP1-214ENST00000556063 GPD1P21695 349 aa7.97□□□□□ -1.13
TDP1-214ENST00000556063 SP100P23497 879 aaPredicted RBP7.97□□□□□ -1.13
TDP1-214ENST00000556063 HARS2P49590 506 aaKnown RBP7.97□□□□□ -1.13
TDP1-214ENST00000556063 KCNQ1P51787 676 aa7.97□□□□□ -1.13
TDP1-214ENST00000556063 GALCP54803 685 aa7.97□□□□□ -1.13
TDP1-214ENST00000556063 NNTQ13423 1086 aa7.97□□□□□ -1.13
TDP1-214ENST00000556063 C2CD6Q53TS8 623 aa7.97□□□□□ -1.13
TDP1-214ENST00000556063 TJAP1Q5JTD0 557 aa7.97□□□□□ -1.13
TDP1-214ENST00000556063 STXBP5Q5T5C0 1151 aa7.97□□□□□ -1.13
TDP1-214ENST00000556063 PLEKHA7Q6IQ23 1121 aa7.97□□□□□ -1.13
TDP1-214ENST00000556063 HFE2Q6ZVN8 426 aa7.97□□□□□ -1.13
TDP1-214ENST00000556063 BHLHA9Q7RTU4 235 aa7.97□□□□□ -1.13
TDP1-214ENST00000556063 KIAA1328Q86T90 577 aa7.97□□□□□ -1.13
TDP1-214ENST00000556063 MIB1Q86YT6 1006 aa7.97□□□□□ -1.13
TDP1-214ENST00000556063 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.97□□□□□ -1.13
TDP1-214ENST00000556063 LRRC8AQ8IWT6 810 aa7.97□□□□□ -1.13
TDP1-214ENST00000556063 UNC45BQ8IWX7 931 aa7.97□□□□□ -1.13
TDP1-214ENST00000556063 DEFB106AQ8N104 65 aa7.97□□□□□ -1.13
TDP1-214ENST00000556063 OLIG1Q8TAK6 271 aa7.97□□□□□ -1.13
TDP1-214ENST00000556063 FEZF2Q8TBJ5 459 aa7.97□□□□□ -1.13
TDP1-214ENST00000556063 DQX1Q8TE96 717 aaKnown RBP7.97□□□□□ -1.13
TDP1-214ENST00000556063 DEPDC1BQ8WUY9 529 aa7.97□□□□□ -1.13
TDP1-214ENST00000556063 USP13Q92995 863 aaPredicted RBP7.97□□□□□ -1.13
TDP1-214ENST00000556063 ELSPBP1Q96BH3 223 aa7.97□□□□□ -1.13
TDP1-214ENST00000556063 PLD4Q96BZ4 506 aa7.97□□□□□ -1.13
TDP1-214ENST00000556063 PDLIM2Q96JY6 352 aa7.97□□□□□ -1.13
TDP1-214ENST00000556063 ZSWIM3Q96MP5 696 aa7.97□□□□□ -1.13
TDP1-214ENST00000556063 SLC2A13Q96QE2 648 aa7.97□□□□□ -1.13
TDP1-214ENST00000556063 CYP2S1Q96SQ9 504 aa7.97□□□□□ -1.13
TDP1-214ENST00000556063 DDX23Q9BUQ8 820 aaKnown RBP7.97□□□□□ -1.13
TDP1-214ENST00000556063 RNF38Q9H0F5 515 aa7.97□□□□□ -1.13
TDP1-214ENST00000556063 SMOC2Q9H3U7 446 aa7.97□□□□□ -1.13
TDP1-214ENST00000556063 FAM204AQ9H8W3 233 aa7.97□□□□□ -1.13
TDP1-214ENST00000556063 METTL5Q9NRN9 209 aaKnown RBP7.97□□□□□ -1.13
TDP1-214ENST00000556063 OSER1Q9NX31 292 aa7.97□□□□□ -1.13
TDP1-214ENST00000556063 SMPD4Q9NXE4 827 aa7.97□□□□□ -1.13
TDP1-214ENST00000556063 TBC1D14Q9P2M4 693 aa7.97□□□□□ -1.13
TDP1-214ENST00000556063 UVRAGQ9P2Y5 699 aa7.97□□□□□ -1.13
TDP1-214ENST00000556063 MYO1AQ9UBC5 1043 aa7.97□□□□□ -1.13
TDP1-214ENST00000556063 SLC12A6Q9UHW9 1150 aa7.97□□□□□ -1.13
TDP1-214ENST00000556063 TMEM59LQ9UK28 342 aa7.97□□□□□ -1.13
TDP1-214ENST00000556063 NUDT5Q9UKK9 219 aa7.97□□□□□ -1.13
TDP1-214ENST00000556063 NAALADL1Q9UQQ1 740 aa7.97□□□□□ -1.13
TDP1-214ENST00000556063 ZNF510Q9Y2H8 683 aa7.97□□□□□ -1.13
TDP1-214ENST00000556063 PCDHA13Q9Y5I0 950 aa7.97□□□□□ -1.13
TDP1-214ENST00000556063 CPQQ9Y646 472 aa7.97□□□□□ -1.13
TDP1-214ENST00000556063 NUP210Q8TEM1 1887 aaPredicted RBP7.96□□□□□ -1.13
TDP1-214ENST00000556063 LAMA2P24043 3122 aaKnown RBP7.96□□□□□ -1.14
TDP1-214ENST00000556063 E2F8A0AVK6 867 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms