RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 ZNF513Q8N8E2 541 aaPredicted RBP8.05□□□□□ -1.12
CHD8-209ENST00000555935 SMYD1Q8NB12 490 aa8.05□□□□□ -1.12
CHD8-209ENST00000555935 HIPK4Q8NE63 616 aa8.05□□□□□ -1.12
CHD8-209ENST00000555935 ACMSDQ8TDX5 336 aa8.05□□□□□ -1.12
CHD8-209ENST00000555935 FNIP1Q8TF40 1166 aa8.05□□□□□ -1.12
CHD8-209ENST00000555935 CNKSR2Q8WXI2 1034 aa8.05□□□□□ -1.12
CHD8-209ENST00000555935 PRPF18Q99633 342 aaKnown RBP8.05□□□□□ -1.12
CHD8-209ENST00000555935 DEFB129Q9H1M3 183 aa8.05□□□□□ -1.12
CHD8-209ENST00000555935 PLGRKTQ9HBL7 147 aa8.05□□□□□ -1.12
CHD8-209ENST00000555935 POPDC2Q9HBU9 364 aa8.05□□□□□ -1.12
CHD8-209ENST00000555935 HOMER2Q9NSB8 354 aa8.05□□□□□ -1.12
CHD8-209ENST00000555935 TMOD2Q9NZR1 351 aa8.05□□□□□ -1.12
CHD8-209ENST00000555935 SLC9A2Q9UBY0 812 aa8.05□□□□□ -1.12
CHD8-209ENST00000555935 RSL24D1Q9UHA3 163 aaKnown RBP8.05□□□□□ -1.12
CHD8-209ENST00000555935 NR2E3Q9Y5X4 410 aa8.05□□□□□ -1.12
CHD8-209ENST00000555935 SQORQ9Y6N5 450 aa8.05□□□□□ -1.12
CHD8-209ENST00000555935 DDTLA6NHG4 134 aaPredicted RBP8.04□□□□□ -1.12
CHD8-209ENST00000555935 H0YCG3 227 aa8.04□□□□□ -1.12
CHD8-209ENST00000555935 STAM2O75886 525 aa8.04□□□□□ -1.12
CHD8-209ENST00000555935 FBXO21O94952 628 aa8.04□□□□□ -1.12
CHD8-209ENST00000555935 APOEP02649 317 aa8.04□□□□□ -1.12
CHD8-209ENST00000555935 CAPNS1P04632 268 aa8.04□□□□□ -1.12
CHD8-209ENST00000555935 SERPINB2P05120 415 aa8.04□□□□□ -1.12
CHD8-209ENST00000555935 SERPINE1P05121 402 aa8.04□□□□□ -1.12
CHD8-209ENST00000555935 OSBPP22059 807 aa8.04□□□□□ -1.12
CHD8-209ENST00000555935 PCSK6P29122 969 aa8.04□□□□□ -1.12
CHD8-209ENST00000555935 SLC1A6P48664 564 aa8.04□□□□□ -1.12
CHD8-209ENST00000555935 IDH3AP50213 366 aa8.04□□□□□ -1.12
CHD8-209ENST00000555935 CDK9P50750 372 aaKnown RBP8.04□□□□□ -1.12
CHD8-209ENST00000555935 SCNN1DP51172 638 aa8.04□□□□□ -1.12
CHD8-209ENST00000555935 CNTN2Q02246 1040 aa8.04□□□□□ -1.12
CHD8-209ENST00000555935 SPIDRQ14159 915 aa8.04□□□□□ -1.12
CHD8-209ENST00000555935 TBC1D10BQ4KMP7 808 aaPredicted RBP8.04□□□□□ -1.12
CHD8-209ENST00000555935 FASTKD1Q53R41 847 aaKnown RBP8.04□□□□□ -1.12
CHD8-209ENST00000555935 SMYD5Q6GMV2 418 aa8.04□□□□□ -1.12
CHD8-209ENST00000555935 SPOPLQ6IQ16 392 aa8.04□□□□□ -1.12
CHD8-209ENST00000555935 Q6ZNX1 250 aa8.04□□□□□ -1.12
CHD8-209ENST00000555935 TRIM67Q6ZTA4 783 aa8.04□□□□□ -1.12
CHD8-209ENST00000555935 ANKRD23Q86SG2 305 aa8.04□□□□□ -1.12
CHD8-209ENST00000555935 RFX6Q8HWS3 928 aa8.04□□□□□ -1.12
CHD8-209ENST00000555935 TFB1MQ8WVM0 346 aaKnown RBP8.04□□□□□ -1.12
CHD8-209ENST00000555935 USP6NLQ92738 828 aa8.04□□□□□ -1.12
CHD8-209ENST00000555935 DLG3Q92796 817 aa8.04□□□□□ -1.12
CHD8-209ENST00000555935 FAF2Q96CS3 445 aa8.04□□□□□ -1.12
CHD8-209ENST00000555935 CNBD2Q96M20 576 aa8.04□□□□□ -1.12
CHD8-209ENST00000555935 ZNF778Q96MU6 729 aa8.04□□□□□ -1.12
CHD8-209ENST00000555935 KIFC3Q9BVG8 833 aa8.04□□□□□ -1.12
CHD8-209ENST00000555935 IDI2Q9BXS1 227 aa8.04□□□□□ -1.12
CHD8-209ENST00000555935 APOBEC3GQ9HC16 384 aaKnown RBP8.04□□□□□ -1.12
CHD8-209ENST00000555935 TBC1D22BQ9NU19 505 aa8.04□□□□□ -1.12
CHD8-209ENST00000555935 PAK5Q9P286 719 aa8.04□□□□□ -1.12
CHD8-209ENST00000555935 ITGB1BP2Q9UKP3 347 aa8.04□□□□□ -1.12
CHD8-209ENST00000555935 CNOT11Q9UKZ1 510 aaKnown RBP8.04□□□□□ -1.12
CHD8-209ENST00000555935 FAF1Q9UNN5 650 aaPredicted RBP8.04□□□□□ -1.12
CHD8-209ENST00000555935 SH3PXD2BA1X283 911 aa8.04□□□□□ -1.12
CHD8-209ENST00000555935 CXorf49A8MYA2 514 aaPredicted RBP8.04□□□□□ -1.12
CHD8-209ENST00000555935 CBFA2T3O75081 653 aa8.04□□□□□ -1.12
CHD8-209ENST00000555935 SORBS2O94875 1100 aaKnown RBP8.04□□□□□ -1.12
CHD8-209ENST00000555935 VNN1O95497 513 aa8.04□□□□□ -1.12
CHD8-209ENST00000555935 FGF3P11487 239 aaPredicted RBP8.04□□□□□ -1.12
CHD8-209ENST00000555935 COX4I1P13073 169 aa8.04□□□□□ -1.12
CHD8-209ENST00000555935 CCDC130P13994 396 aa8.04□□□□□ -1.12
CHD8-209ENST00000555935 ZFXP17010 805 aaPredicted RBP8.04□□□□□ -1.12
CHD8-209ENST00000555935 ZNF23P17027 643 aa8.04□□□□□ -1.12
CHD8-209ENST00000555935 PSMA2P25787 234 aa8.04□□□□□ -1.12
CHD8-209ENST00000555935 SSTR3P32745 418 aaPredicted RBP8.04□□□□□ -1.12
CHD8-209ENST00000555935 CDH5P33151 784 aaPredicted RBP8.04□□□□□ -1.12
CHD8-209ENST00000555935 JAK3P52333 1124 aa8.04□□□□□ -1.12
CHD8-209ENST00000555935 KCNQ4P56696 695 aa8.04□□□□□ -1.12
CHD8-209ENST00000555935 MTMR2Q13614 643 aa8.04□□□□□ -1.12
CHD8-209ENST00000555935 BMPR2Q13873 1038 aa8.04□□□□□ -1.12
CHD8-209ENST00000555935 LRRC8BQ6P9F7 803 aa8.04□□□□□ -1.12
CHD8-209ENST00000555935 PACS1Q6VY07 963 aa8.04□□□□□ -1.12
CHD8-209ENST00000555935 ZCCHC23Q6ZST2 131 aa8.04□□□□□ -1.12
CHD8-209ENST00000555935 PATL1Q86TB9 770 aaKnown RBP8.04□□□□□ -1.12
CHD8-209ENST00000555935 SEPT12Q8IYM1 358 aa8.04□□□□□ -1.12
CHD8-209ENST00000555935 SPATA18Q8TC71 538 aa8.04□□□□□ -1.12
CHD8-209ENST00000555935 PRPF31Q8WWY3 499 aaKnown RBP8.04□□□□□ -1.12
CHD8-209ENST00000555935 ZDHHC15Q96MV8 337 aa8.04□□□□□ -1.12
CHD8-209ENST00000555935 INO80BQ9C086 356 aaPredicted RBP8.04□□□□□ -1.12
CHD8-209ENST00000555935 IFT122Q9HBG6 1241 aa8.04□□□□□ -1.12
CHD8-209ENST00000555935 AGO4Q9HCK5 861 aaKnown RBP8.04□□□□□ -1.12
CHD8-209ENST00000555935 CYP26B1Q9NR63 512 aa8.04□□□□□ -1.12
CHD8-209ENST00000555935 RIMS3Q9UJD0 308 aa8.04□□□□□ -1.12
CHD8-209ENST00000555935 VPS28Q9UK41 221 aa8.04□□□□□ -1.12
CHD8-209ENST00000555935 APPL1Q9UKG1 709 aa8.04□□□□□ -1.12
CHD8-209ENST00000555935 FAM159BA6NKW6 160 aa8.03□□□□□ -1.12
CHD8-209ENST00000555935 H0YJX3 145 aa8.03□□□□□ -1.12
CHD8-209ENST00000555935 GLRA3O75311 464 aa8.03□□□□□ -1.12
CHD8-209ENST00000555935 LRCH4O75427 683 aa8.03□□□□□ -1.12
CHD8-209ENST00000555935 GDF11O95390 407 aa8.03□□□□□ -1.12
CHD8-209ENST00000555935 PORP16435 677 aaPredicted RBP8.03□□□□□ -1.12
CHD8-209ENST00000555935 EIF4BP23588 611 aaKnown RBP8.03□□□□□ -1.12
CHD8-209ENST00000555935 MAGEA6P43360 314 aa8.03□□□□□ -1.12
CHD8-209ENST00000555935 CRKP46108 304 aa8.03□□□□□ -1.12
CHD8-209ENST00000555935 NUP107P57740 925 aa8.03□□□□□ -1.12
CHD8-209ENST00000555935 NOMO1Q15155 1222 aa8.03□□□□□ -1.12
CHD8-209ENST00000555935 METTL21CQ5VZV1 264 aa8.03□□□□□ -1.12
CHD8-209ENST00000555935 PRR5LQ6MZQ0 368 aa8.03□□□□□ -1.12
CHD8-209ENST00000555935 DARS2Q6PI48 645 aaKnown RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms