RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 C11orf44Q8N8P7 122 aa3.36□□□□□ -1.87
MTHFD1-212ENST00000555858 FSIP1Q8NA03 581 aa3.36□□□□□ -1.87
MTHFD1-212ENST00000555858 ANKRD52Q8NB46 1076 aa3.36□□□□□ -1.87
MTHFD1-212ENST00000555858 ZMIZ2Q8NF64 920 aa3.36□□□□□ -1.87
MTHFD1-212ENST00000555858 SLC22A17Q8WUG5 538 aa3.36□□□□□ -1.87
MTHFD1-212ENST00000555858 ATG4AQ8WYN0 398 aa3.36□□□□□ -1.87
MTHFD1-212ENST00000555858 OVCA2Q8WZ82 227 aa3.36□□□□□ -1.87
MTHFD1-212ENST00000555858 RNF125Q96EQ8 232 aa3.36□□□□□ -1.87
MTHFD1-212ENST00000555858 MCRS1Q96EZ8 462 aa3.36□□□□□ -1.87
MTHFD1-212ENST00000555858 REXO5Q96IC2 774 aaKnown RBP3.36□□□□□ -1.87
MTHFD1-212ENST00000555858 BOD1Q96IK1 185 aa3.36□□□□□ -1.87
MTHFD1-212ENST00000555858 HAPLN3Q96S86 360 aa3.36□□□□□ -1.87
MTHFD1-212ENST00000555858 MECRQ9BV79 373 aa3.36□□□□□ -1.87
MTHFD1-212ENST00000555858 CHMP4BQ9H444 224 aaKnown RBP3.36□□□□□ -1.87
MTHFD1-212ENST00000555858 CCDC134Q9H6E4 229 aa3.36□□□□□ -1.87
MTHFD1-212ENST00000555858 ACAD9Q9H845 621 aa3.36□□□□□ -1.87
MTHFD1-212ENST00000555858 RXFP3Q9NSD7 469 aa3.36□□□□□ -1.87
MTHFD1-212ENST00000555858 TRPM5Q9NZQ8 1165 aa3.36□□□□□ -1.87
MTHFD1-212ENST00000555858 PPP4R1LQ9P1A2 415 aa3.36□□□□□ -1.87
MTHFD1-212ENST00000555858 ORC3Q9UBD5 711 aaPredicted RBP3.36□□□□□ -1.87
MTHFD1-212ENST00000555858 NKX1-2Q9UD57 310 aaPredicted RBP3.36□□□□□ -1.87
MTHFD1-212ENST00000555858 ASAP1Q9ULH1 1129 aa3.36□□□□□ -1.87
MTHFD1-212ENST00000555858 SORCS3Q9UPU3 1222 aa3.36□□□□□ -1.87
MTHFD1-212ENST00000555858 JAG2Q9Y219 1238 aa3.36□□□□□ -1.87
MTHFD1-212ENST00000555858 DRG1Q9Y295 367 aaKnown RBP3.36□□□□□ -1.87
MTHFD1-212ENST00000555858 FPGT-TNNI3KV9GXZ4 949 aa3.36□□□□□ -1.87
MTHFD1-212ENST00000555858 LOC105369274A0A096LPK9 316 aa3.35□□□□□ -1.87
MTHFD1-212ENST00000555858 LOC102723532A0A0G2JNH3 316 aa3.35□□□□□ -1.87
MTHFD1-212ENST00000555858 KIAA0355O15063 1070 aa3.35□□□□□ -1.87
MTHFD1-212ENST00000555858 KLK10O43240 276 aa3.35□□□□□ -1.87
MTHFD1-212ENST00000555858 FOXS1O43638 330 aa3.35□□□□□ -1.87
MTHFD1-212ENST00000555858 RECQL4O94761 1208 aa3.35□□□□□ -1.87
MTHFD1-212ENST00000555858 CSF1P09603 554 aa3.35□□□□□ -1.87
MTHFD1-212ENST00000555858 TMEM225BP0DP42 221 aa3.35□□□□□ -1.87
MTHFD1-212ENST00000555858 CPA1P15085 419 aa3.35□□□□□ -1.87
MTHFD1-212ENST00000555858 DRD1P21728 446 aa3.35□□□□□ -1.87
MTHFD1-212ENST00000555858 CHMP24386 653 aa3.35□□□□□ -1.87
MTHFD1-212ENST00000555858 PGM1P36871 562 aa3.35□□□□□ -1.87
MTHFD1-212ENST00000555858 PBX1P40424 430 aa3.35□□□□□ -1.87
MTHFD1-212ENST00000555858 DGKQP52824 942 aa3.35□□□□□ -1.87
MTHFD1-212ENST00000555858 ATXN1P54253 815 aaKnown RBP3.35□□□□□ -1.87
MTHFD1-212ENST00000555858 EIF4A1P60842 406 aaKnown RBP3.35□□□□□ -1.87
MTHFD1-212ENST00000555858 GALNT2Q10471 571 aa3.35□□□□□ -1.87
MTHFD1-212ENST00000555858 DCTN1Q14203 1278 aa3.35□□□□□ -1.87
MTHFD1-212ENST00000555858 CYP2A13Q16696 494 aa3.35□□□□□ -1.87
MTHFD1-212ENST00000555858 TSTQ16762 297 aaKnown RBP3.35□□□□□ -1.87
MTHFD1-212ENST00000555858 GEN1Q17RS7 908 aa3.35□□□□□ -1.87
MTHFD1-212ENST00000555858 LY6KQ17RY6 165 aa3.35□□□□□ -1.87
MTHFD1-212ENST00000555858 SPDYE7PQ495Y7 208 aa3.35□□□□□ -1.87
MTHFD1-212ENST00000555858 NRN1LQ496H8 165 aa3.35□□□□□ -1.87
MTHFD1-212ENST00000555858 ZNF484Q5JVG2 852 aa3.35□□□□□ -1.87
MTHFD1-212ENST00000555858 B3GNTL1Q67FW5 361 aaPredicted RBP3.35□□□□□ -1.87
MTHFD1-212ENST00000555858 HAUS3Q68CZ6 603 aa3.35□□□□□ -1.87
MTHFD1-212ENST00000555858 SLC9A4Q6AI14 798 aa3.35□□□□□ -1.87
MTHFD1-212ENST00000555858 ARMC6Q6NXE6 501 aa3.35□□□□□ -1.87
MTHFD1-212ENST00000555858 Q6ZRM9 215 aa3.35□□□□□ -1.87
MTHFD1-212ENST00000555858 KRT27Q7Z3Y8 459 aa3.35□□□□□ -1.87
MTHFD1-212ENST00000555858 RAB11FIP4Q86YS3 637 aa3.35□□□□□ -1.87
MTHFD1-212ENST00000555858 ARMC8Q8IUR7 673 aa3.35□□□□□ -1.87
MTHFD1-212ENST00000555858 OR4N4Q8N0Y3 316 aa3.35□□□□□ -1.87
MTHFD1-212ENST00000555858 ZNF808Q8N4W9 903 aaPredicted RBP3.35□□□□□ -1.87
MTHFD1-212ENST00000555858 METTL25Q8N6Q8 603 aa3.35□□□□□ -1.87
MTHFD1-212ENST00000555858 ANKRD44Q8N8A2 993 aa3.35□□□□□ -1.87
MTHFD1-212ENST00000555858 FAM71DQ8N9W8 422 aa3.35□□□□□ -1.87
MTHFD1-212ENST00000555858 C1orf131Q8NDD1 294 aaKnown RBP3.35□□□□□ -1.87
MTHFD1-212ENST00000555858 SUPT20HQ8NEM7 779 aa3.35□□□□□ -1.87
MTHFD1-212ENST00000555858 SLC2A12Q8TD20 617 aa3.35□□□□□ -1.87
MTHFD1-212ENST00000555858 TBC1D22AQ8WUA7 517 aa3.35□□□□□ -1.87
MTHFD1-212ENST00000555858 FAM89AQ96GI7 184 aa3.35□□□□□ -1.87
MTHFD1-212ENST00000555858 TIGD1Q96MW7 591 aa3.35□□□□□ -1.87
MTHFD1-212ENST00000555858 SERINC2Q96SA4 455 aa3.35□□□□□ -1.87
MTHFD1-212ENST00000555858 NUDT16L1Q9BRJ7 211 aaKnown RBP3.35□□□□□ -1.87
MTHFD1-212ENST00000555858 TEX101Q9BY14 249 aa3.35□□□□□ -1.87
MTHFD1-212ENST00000555858 TPSD1Q9BZJ3 242 aa3.35□□□□□ -1.87
MTHFD1-212ENST00000555858 AMBRA1Q9C0C7 1298 aa3.35□□□□□ -1.87
MTHFD1-212ENST00000555858 PRDM13Q9H4Q3 707 aa3.35□□□□□ -1.87
MTHFD1-212ENST00000555858 PLEKHA2Q9HB19 425 aa3.35□□□□□ -1.87
MTHFD1-212ENST00000555858 KCNK9Q9NPC2 374 aa3.35□□□□□ -1.87
MTHFD1-212ENST00000555858 TMEM74BQ9NUR3 256 aa3.35□□□□□ -1.87
MTHFD1-212ENST00000555858 FBXO28Q9NVF7 368 aa3.35□□□□□ -1.87
MTHFD1-212ENST00000555858 INTS13Q9NVM9 706 aa3.35□□□□□ -1.87
MTHFD1-212ENST00000555858 NSMCE4AQ9NXX6 385 aa3.35□□□□□ -1.87
MTHFD1-212ENST00000555858 HSF4Q9ULV5 492 aa3.35□□□□□ -1.87
MTHFD1-212ENST00000555858 UBE2J1Q9Y385 318 aaPredicted RBP3.35□□□□□ -1.87
MTHFD1-212ENST00000555858 TTLL3Q9Y4R7 772 aa3.35□□□□□ -1.87
MTHFD1-212ENST00000555858 NOX1Q9Y5S8 564 aa3.35□□□□□ -1.87
MTHFD1-212ENST00000555858 ZNF536O15090 1300 aa3.35□□□□□ -1.87
MTHFD1-212ENST00000555858 TDRD9Q8NDG6 1382 aaKnown RBP3.35□□□□□ -1.87
MTHFD1-212ENST00000555858 LMTK3Q96Q04 1460 aa3.35□□□□□ -1.87
MTHFD1-212ENST00000555858 GAGE12BA1L429 117 aa3.34□□□□□ -1.87
MTHFD1-212ENST00000555858 PI4KAP2A4QPH2 592 aa3.34□□□□□ -1.87
MTHFD1-212ENST00000555858 GAGE12HA6NDE8 117 aa3.34□□□□□ -1.87
MTHFD1-212ENST00000555858 MBD3L5A6NJ08 208 aaPredicted RBP3.34□□□□□ -1.87
MTHFD1-212ENST00000555858 MARCH11A6NNE9 402 aa3.34□□□□□ -1.87
MTHFD1-212ENST00000555858 A8MVJ9 347 aa3.34□□□□□ -1.87
MTHFD1-212ENST00000555858 GRXCR1A8MXD5 290 aa3.34□□□□□ -1.87
MTHFD1-212ENST00000555858 PSMD9O00233 223 aa3.34□□□□□ -1.87
MTHFD1-212ENST00000555858 SPTLC2O15270 562 aa3.34□□□□□ -1.87
MTHFD1-212ENST00000555858 PPM1DO15297 605 aa3.34□□□□□ -1.87
MTHFD1-212ENST00000555858 HNRNPRO43390 633 aaKnown RBP3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms