RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 C8AP07357 584 aa10.64□□□□□ -0.71
SRP54-208ENST00000555557 RARAP10276 462 aa10.64□□□□□ -0.71
SRP54-208ENST00000555557 PLD1Q13393 1074 aa10.64□□□□□ -0.71
SRP54-208ENST00000555557 TAF12Q16514 161 aa10.64□□□□□ -0.71
SRP54-208ENST00000555557 HADHQ16836 314 aaKnown RBP10.64□□□□□ -0.71
SRP54-208ENST00000555557 ADAT2Q7Z6V5 191 aaKnown RBP10.64□□□□□ -0.71
SRP54-208ENST00000555557 DNAJB7Q7Z6W7 309 aaPredicted RBP10.64□□□□□ -0.71
SRP54-208ENST00000555557 ADGRD2Q7Z7M1 963 aa10.64□□□□□ -0.71
SRP54-208ENST00000555557 TAC4Q86UU9 113 aa10.64□□□□□ -0.71
SRP54-208ENST00000555557 DQX1Q8TE96 717 aaKnown RBP10.64□□□□□ -0.71
SRP54-208ENST00000555557 SLC22A17Q8WUG5 538 aa10.64□□□□□ -0.71
SRP54-208ENST00000555557 RAPGEF5Q92565 580 aa10.64□□□□□ -0.71
SRP54-208ENST00000555557 HSPH1Q92598 858 aa10.64□□□□□ -0.71
SRP54-208ENST00000555557 CASP10Q92851 521 aa10.64□□□□□ -0.71
SRP54-208ENST00000555557 PBKQ96KB5 322 aa10.64□□□□□ -0.71
SRP54-208ENST00000555557 CARD9Q9H257 536 aa10.64□□□□□ -0.71
SRP54-208ENST00000555557 PIGVQ9NUD9 493 aa10.64□□□□□ -0.71
SRP54-208ENST00000555557 DDIT4Q9NX09 232 aa10.64□□□□□ -0.71
SRP54-208ENST00000555557 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.64□□□□□ -0.71
SRP54-208ENST00000555557 PRPSAP2O60256 369 aa10.64□□□□□ -0.71
SRP54-208ENST00000555557 CLASP2O75122 1294 aaKnown RBP10.64□□□□□ -0.71
SRP54-208ENST00000555557 CD48P09326 243 aa10.64□□□□□ -0.71
SRP54-208ENST00000555557 CSH1P0DML2 217 aa10.64□□□□□ -0.71
SRP54-208ENST00000555557 CSH2P0DML3 217 aa10.64□□□□□ -0.71
SRP54-208ENST00000555557 EPCAMP16422 314 aa10.64□□□□□ -0.71
SRP54-208ENST00000555557 DESP17661 470 aa10.64□□□□□ -0.71
SRP54-208ENST00000555557 EPHB3P54753 998 aa10.64□□□□□ -0.71
SRP54-208ENST00000555557 RBM10P98175 930 aaKnown RBP10.64□□□□□ -0.71
SRP54-208ENST00000555557 DEUP1Q05D60 604 aa10.64□□□□□ -0.71
SRP54-208ENST00000555557 VEPH1Q14D04 833 aa10.64□□□□□ -0.71
SRP54-208ENST00000555557 ZC3H12AQ5D1E8 599 aaKnown RBP10.64□□□□□ -0.71
SRP54-208ENST00000555557 CCDC181Q5TID7 509 aa10.64□□□□□ -0.71
SRP54-208ENST00000555557 LRRC38Q5VT99 294 aa10.64□□□□□ -0.71
SRP54-208ENST00000555557 RSRC2Q7L4I2 434 aaKnown RBP10.64□□□□□ -0.71
SRP54-208ENST00000555557 STRADAQ7RTN6 431 aa10.64□□□□□ -0.71
SRP54-208ENST00000555557 BNIPLQ7Z465 357 aa10.64□□□□□ -0.71
SRP54-208ENST00000555557 CCDC50Q8IVM0 306 aa10.64□□□□□ -0.71
SRP54-208ENST00000555557 KATNAL2Q8IYT4 538 aa10.64□□□□□ -0.71
SRP54-208ENST00000555557 CCDC185Q8N715 623 aa10.64□□□□□ -0.71
SRP54-208ENST00000555557 TIFAQ96CG3 184 aa10.64□□□□□ -0.71
SRP54-208ENST00000555557 ZNF512Q96ME7 567 aaPredicted RBP10.64□□□□□ -0.71
SRP54-208ENST00000555557 SLITRK1Q96PX8 696 aa10.64□□□□□ -0.71
SRP54-208ENST00000555557 TTLL2Q9BWV7 592 aa10.64□□□□□ -0.71
SRP54-208ENST00000555557 FAM204AQ9H8W3 233 aa10.64□□□□□ -0.71
SRP54-208ENST00000555557 TLR8Q9NR97 1041 aaKnown RBP10.64□□□□□ -0.71
SRP54-208ENST00000555557 LRRD1A4D1F6 860 aa10.63□□□□□ -0.71
SRP54-208ENST00000555557 CCL16O15467 120 aa10.63□□□□□ -0.71
SRP54-208ENST00000555557 MSI1O43347 362 aaKnown RBP10.63□□□□□ -0.71
SRP54-208ENST00000555557 RFPL2O75678 378 aa10.63□□□□□ -0.71
SRP54-208ENST00000555557 ENDOD1O94919 500 aa10.63□□□□□ -0.71
SRP54-208ENST00000555557 ZRANB2O95218 330 aaKnown RBP eCLIP10.63□□□□□ -0.71
SRP54-208ENST00000555557 FGGP02679 453 aa10.63□□□□□ -0.71
SRP54-208ENST00000555557 KRT1P04264 644 aa10.63□□□□□ -0.71
SRP54-208ENST00000555557 KRT7P08729 469 aa10.63□□□□□ -0.71
SRP54-208ENST00000555557 RARGP13631 454 aa10.63□□□□□ -0.71
SRP54-208ENST00000555557 RDXP35241 583 aaKnown RBP10.63□□□□□ -0.71
SRP54-208ENST00000555557 TUBB2AQ13885 445 aa10.63□□□□□ -0.71
SRP54-208ENST00000555557 CA9Q16790 459 aa10.63□□□□□ -0.71
SRP54-208ENST00000555557 WHAMMP3Q1A5X7 153 aa10.63□□□□□ -0.71
SRP54-208ENST00000555557 RNF139Q8WU17 664 aa10.63□□□□□ -0.71
SRP54-208ENST00000555557 PSMG2Q969U7 264 aa10.63□□□□□ -0.71
SRP54-208ENST00000555557 HERPUD2Q9BSE4 406 aa10.63□□□□□ -0.71
SRP54-208ENST00000555557 TUBB2BQ9BVA1 445 aa10.63□□□□□ -0.71
SRP54-208ENST00000555557 HEMGNQ9BXL5 484 aa10.63□□□□□ -0.71
SRP54-208ENST00000555557 CCSER2Q9H7U1 834 aa10.63□□□□□ -0.71
SRP54-208ENST00000555557 ZNF334Q9HCZ1 680 aaPredicted RBP10.63□□□□□ -0.71
SRP54-208ENST00000555557 WDR6Q9NNW5 1121 aaKnown RBP10.63□□□□□ -0.71
SRP54-208ENST00000555557 ANLNQ9NQW6 1124 aa10.63□□□□□ -0.71
SRP54-208ENST00000555557 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.63□□□□□ -0.71
SRP54-208ENST00000555557 COMMD8Q9NX08 183 aa10.63□□□□□ -0.71
SRP54-208ENST00000555557 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.63□□□□□ -0.71
SRP54-208ENST00000555557 MAFFQ9ULX9 164 aa10.63□□□□□ -0.71
SRP54-208ENST00000555557 PATJQ8NI35 1801 aa10.63□□□□□ -0.71
SRP54-208ENST00000555557 TCRBV7S2A1N4TA0A589 114 aa10.62□□□□□ -0.71
SRP54-208ENST00000555557 CES2O00748 559 aa10.62□□□□□ -0.71
SRP54-208ENST00000555557 LRG1P02750 347 aa10.62□□□□□ -0.71
SRP54-208ENST00000555557 ZDHHC11BP0C7U3 371 aa10.62□□□□□ -0.71
SRP54-208ENST00000555557 KRT10P13645 584 aa10.62□□□□□ -0.71
SRP54-208ENST00000555557 EFEMP1Q12805 493 aa10.62□□□□□ -0.71
SRP54-208ENST00000555557 ZNF697Q5TEC3 545 aa10.62□□□□□ -0.71
SRP54-208ENST00000555557 KAZNQ674X7 775 aa10.62□□□□□ -0.71
SRP54-208ENST00000555557 MFSD7Q6UXD7 560 aa10.62□□□□□ -0.71
SRP54-208ENST00000555557 CCDC149Q6ZUS6 474 aa10.62□□□□□ -0.71
SRP54-208ENST00000555557 BEND5Q7L4P6 421 aa10.62□□□□□ -0.71
SRP54-208ENST00000555557 POLNQ7Z5Q5 900 aa10.62□□□□□ -0.71
SRP54-208ENST00000555557 HS6ST3Q8IZP7 471 aa10.62□□□□□ -0.71
SRP54-208ENST00000555557 PYROXD2Q8N2H3 581 aa10.62□□□□□ -0.71
SRP54-208ENST00000555557 ARHGAP18Q8N392 663 aa10.62□□□□□ -0.71
SRP54-208ENST00000555557 RASGEF1CQ8N431 466 aa10.62□□□□□ -0.71
SRP54-208ENST00000555557 KCTD6Q8NC69 237 aa10.62□□□□□ -0.71
SRP54-208ENST00000555557 MYRFLQ96LU7 910 aa10.62□□□□□ -0.71
SRP54-208ENST00000555557 CEP295NLQ96MC4 621 aa10.62□□□□□ -0.71
SRP54-208ENST00000555557 SNRNP25Q9BV90 132 aaKnown RBP10.62□□□□□ -0.71
SRP54-208ENST00000555557 AP1M1Q9BXS5 423 aa10.62□□□□□ -0.71
SRP54-208ENST00000555557 PRO3102Q9H379 93 aa10.62□□□□□ -0.71
SRP54-208ENST00000555557 MAN1C1Q9NR34 630 aa10.62□□□□□ -0.71
SRP54-208ENST00000555557 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.62□□□□□ -0.71
SRP54-208ENST00000555557 NR2E1Q9Y466 385 aa10.62□□□□□ -0.71
SRP54-208ENST00000555557 ZNF840PA6NDX5 716 aa10.62□□□□□ -0.71
SRP54-208ENST00000555557 C3orf70A6NLC5 250 aaPredicted RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms