RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 DIO1P49895 249 aa4.57□□□□□ -1.68
SCFD1-216ENST00000555550 LMAN2Q12907 356 aa4.57□□□□□ -1.68
SCFD1-216ENST00000555550 Q6ZTC4 211 aa4.57□□□□□ -1.68
SCFD1-216ENST00000555550 UNC13DQ70J99 1090 aa4.57□□□□□ -1.68
SCFD1-216ENST00000555550 BCDIN3DQ7Z5W3 292 aaKnown RBP4.57□□□□□ -1.68
SCFD1-216ENST00000555550 PIP4P1Q86T03 277 aa4.57□□□□□ -1.68
SCFD1-216ENST00000555550 C11orf44Q8N8P7 122 aa4.57□□□□□ -1.68
SCFD1-216ENST00000555550 ZNF668Q96K58 619 aaPredicted RBP4.57□□□□□ -1.68
SCFD1-216ENST00000555550 CAMK1GQ96NX5 476 aa4.57□□□□□ -1.68
SCFD1-216ENST00000555550 PPP1R10Q96QC0 940 aaKnown RBP4.57□□□□□ -1.68
SCFD1-216ENST00000555550 HIST1H2AAQ96QV6 131 aa4.57□□□□□ -1.68
SCFD1-216ENST00000555550 APOL5Q9BWW9 433 aa4.57□□□□□ -1.68
SCFD1-216ENST00000555550 TBC1D23Q9NUY8 699 aa4.57□□□□□ -1.68
SCFD1-216ENST00000555550 KLHL42Q9P2K6 505 aa4.57□□□□□ -1.68
SCFD1-216ENST00000555550 HEY2Q9UBP5 337 aa4.57□□□□□ -1.68
SCFD1-216ENST00000555550 NKX1-2Q9UD57 310 aaPredicted RBP4.57□□□□□ -1.68
SCFD1-216ENST00000555550 ZNF212Q9UDV6 495 aa4.57□□□□□ -1.68
SCFD1-216ENST00000555550 BTBD19C9JJ37 291 aa4.56□□□□□ -1.68
SCFD1-216ENST00000555550 SPRY2O43597 315 aa4.56□□□□□ -1.68
SCFD1-216ENST00000555550 MT-CO3P00414 261 aa4.56□□□□□ -1.68
SCFD1-216ENST00000555550 IL1R1P14778 569 aa4.56□□□□□ -1.68
SCFD1-216ENST00000555550 RHCEP18577 417 aa4.56□□□□□ -1.68
SCFD1-216ENST00000555550 RHDQ02161 417 aa4.56□□□□□ -1.68
SCFD1-216ENST00000555550 HYAL1Q12794 435 aa4.56□□□□□ -1.68
SCFD1-216ENST00000555550 KCNAB1Q14722 419 aa4.56□□□□□ -1.68
SCFD1-216ENST00000555550 NPY5RQ15761 445 aa4.56□□□□□ -1.68
SCFD1-216ENST00000555550 AWAT1Q58HT5 328 aa4.56□□□□□ -1.68
SCFD1-216ENST00000555550 UBAP2Q5T6F2 1119 aaKnown RBP4.56□□□□□ -1.68
SCFD1-216ENST00000555550 FMNL3Q8IVF7 1028 aa4.56□□□□□ -1.68
SCFD1-216ENST00000555550 C16orf71Q8IYS4 520 aaPredicted RBP4.56□□□□□ -1.68
SCFD1-216ENST00000555550 OSR1Q8TAX0 266 aaPredicted RBP4.56□□□□□ -1.68
SCFD1-216ENST00000555550 CTAGE1Q96RT6 745 aa4.56□□□□□ -1.68
SCFD1-216ENST00000555550 ZCWPW1Q9H0M4 648 aa4.56□□□□□ -1.68
SCFD1-216ENST00000555550 NUP62CLQ9H1M0 184 aa4.56□□□□□ -1.68
SCFD1-216ENST00000555550 FAM83DQ9H4H8 585 aa4.56□□□□□ -1.68
SCFD1-216ENST00000555550 ASIC5Q9NY37 505 aa4.56□□□□□ -1.68
SCFD1-216ENST00000555550 PRSS44E7EML9 344 aa4.55□□□□□ -1.68
SCFD1-216ENST00000555550 PARP1P09874 1014 aaKnown RBP4.55□□□□□ -1.68
SCFD1-216ENST00000555550 RPL17P18621 184 aaKnown RBP4.55□□□□□ -1.68
SCFD1-216ENST00000555550 BTF3P20290 206 aaKnown RBP4.55□□□□□ -1.68
SCFD1-216ENST00000555550 NTSR1P30989 418 aa4.55□□□□□ -1.68
SCFD1-216ENST00000555550 ME1P48163 572 aa4.55□□□□□ -1.68
SCFD1-216ENST00000555550 TIAL1Q01085 375 aaKnown RBP eCLIP4.55□□□□□ -1.68
SCFD1-216ENST00000555550 SEMA5AQ13591 1074 aa4.55□□□□□ -1.68
SCFD1-216ENST00000555550 C4orf46Q504U0 113 aa4.55□□□□□ -1.68
SCFD1-216ENST00000555550 PLAG1Q6DJT9 500 aa4.55□□□□□ -1.68
SCFD1-216ENST00000555550 MZT2AQ6P582 158 aa4.55□□□□□ -1.68
SCFD1-216ENST00000555550 CLEC9AQ6UXN8 241 aa4.55□□□□□ -1.68
SCFD1-216ENST00000555550 RNF44Q7L0R7 432 aa4.55□□□□□ -1.68
SCFD1-216ENST00000555550 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.55□□□□□ -1.68
SCFD1-216ENST00000555550 SDR16C5Q8N3Y7 309 aa4.55□□□□□ -1.68
SCFD1-216ENST00000555550 MAFAQ8NHW3 353 aaPredicted RBP4.55□□□□□ -1.68
SCFD1-216ENST00000555550 TIFAQ96CG3 184 aa4.55□□□□□ -1.68
SCFD1-216ENST00000555550 THOC3Q96J01 351 aaKnown RBP4.55□□□□□ -1.68
SCFD1-216ENST00000555550 VPS50Q96JG6 964 aa4.55□□□□□ -1.68
SCFD1-216ENST00000555550 SNX22Q96L94 193 aa4.55□□□□□ -1.68
SCFD1-216ENST00000555550 TRMOQ9BU70 441 aa4.55□□□□□ -1.68
SCFD1-216ENST00000555550 PNPLA8Q9NP80 782 aa4.55□□□□□ -1.68
SCFD1-216ENST00000555550 TRIM36Q9NQ86 728 aa4.55□□□□□ -1.68
SCFD1-216ENST00000555550 PI4KBQ9UBF8 816 aa4.55□□□□□ -1.68
SCFD1-216ENST00000555550 DNAJB11Q9UBS4 358 aa4.55□□□□□ -1.68
SCFD1-216ENST00000555550 STEAP1Q9UHE8 339 aa4.55□□□□□ -1.68
SCFD1-216ENST00000555550 CORO2BQ9UQ03 480 aa4.55□□□□□ -1.68
SCFD1-216ENST00000555550 RHPN2P1A8MT19 583 aa4.54□□□□□ -1.68
SCFD1-216ENST00000555550 AGPSO00116 658 aa4.54□□□□□ -1.68
SCFD1-216ENST00000555550 PQBP1O60828 265 aaKnown RBP4.54□□□□□ -1.68
SCFD1-216ENST00000555550 MT-ND5P03915 603 aa4.54□□□□□ -1.68
SCFD1-216ENST00000555550 CDKN2AP42771 156 aaKnown RBP4.54□□□□□ -1.68
SCFD1-216ENST00000555550 KCNB1Q14721 858 aa4.54□□□□□ -1.68
SCFD1-216ENST00000555550 ST3GAL2Q16842 350 aa4.54□□□□□ -1.68
SCFD1-216ENST00000555550 CC2D1BQ5T0F9 858 aaKnown RBP4.54□□□□□ -1.68
SCFD1-216ENST00000555550 TMEM63BQ5T3F8 832 aa4.54□□□□□ -1.68
SCFD1-216ENST00000555550 ZNF549Q6P9A3 640 aa4.54□□□□□ -1.68
SCFD1-216ENST00000555550 VSTM1Q6UX27 236 aa4.54□□□□□ -1.68
SCFD1-216ENST00000555550 DCDC5Q6ZRR9 648 aa4.54□□□□□ -1.68
SCFD1-216ENST00000555550 PIM3Q86V86 326 aa4.54□□□□□ -1.68
SCFD1-216ENST00000555550 P3H2Q8IVL5 708 aa4.54□□□□□ -1.68
SCFD1-216ENST00000555550 FSTL5Q8N475 847 aaPredicted RBP4.54□□□□□ -1.68
SCFD1-216ENST00000555550 ZNF398Q8TD17 642 aa4.54□□□□□ -1.68
SCFD1-216ENST00000555550 MAP4K1Q92918 833 aa4.54□□□□□ -1.68
SCFD1-216ENST00000555550 TTC17Q96AE7 1141 aa4.54□□□□□ -1.68
SCFD1-216ENST00000555550 CTHRC1Q96CG8 243 aa4.54□□□□□ -1.68
SCFD1-216ENST00000555550 MSLNLQ96KJ4 702 aa4.54□□□□□ -1.68
SCFD1-216ENST00000555550 STRBPQ96SI9 672 aaKnown RBP4.54□□□□□ -1.68
SCFD1-216ENST00000555550 BTBD1Q9H0C5 482 aa4.54□□□□□ -1.68
SCFD1-216ENST00000555550 USP29Q9HBJ7 922 aa4.54□□□□□ -1.68
SCFD1-216ENST00000555550 METTL14Q9HCE5 456 aaKnown RBP4.54□□□□□ -1.68
SCFD1-216ENST00000555550 DKK4Q9UBT3 224 aa4.54□□□□□ -1.68
SCFD1-216ENST00000555550 RIMKLBQ9ULI2 386 aa4.54□□□□□ -1.68
SCFD1-216ENST00000555550 HPSEQ9Y251 543 aa4.54□□□□□ -1.68
SCFD1-216ENST00000555550 ZMYM2Q9UBW7 1377 aa4.53□□□□□ -1.68
SCFD1-216ENST00000555550 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.53□□□□□ -1.68
SCFD1-216ENST00000555550 B4DGG1 531 aa4.53□□□□□ -1.68
SCFD1-216ENST00000555550 THAP12O43422 761 aa4.53□□□□□ -1.68
SCFD1-216ENST00000555550 TLR2O60603 784 aa4.53□□□□□ -1.68
SCFD1-216ENST00000555550 ANXA2P07355 339 aaKnown RBP4.53□□□□□ -1.68
SCFD1-216ENST00000555550 APEHP13798 732 aaKnown RBP4.53□□□□□ -1.68
SCFD1-216ENST00000555550 LARS2Q15031 903 aaKnown RBP4.53□□□□□ -1.68
SCFD1-216ENST00000555550 RRAGBQ5VZM2 374 aa4.53□□□□□ -1.68
SCFD1-216ENST00000555550 COLCA1Q6ZS62 124 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms