RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, human

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-222	ENST00000555506		A1L4Q6	167 aa		4.99	□□□□□ -1.61
KTN1-222	ENST00000555506	TMEM200C	A6NKL6	621 aa		4.99	□□□□□ -1.61
KTN1-222	ENST00000555506	EFCAB8	A8MWE9	144 aa		4.99	□□□□□ -1.61
KTN1-222	ENST00000555506	RPP40	O75818	363 aa	Known RBP	4.99	□□□□□ -1.61
KTN1-222	ENST00000555506	VNN1	O95497	513 aa		4.99	□□□□□ -1.61
KTN1-222	ENST00000555506	ERBB2	P04626	1255 aa		4.99	□□□□□ -1.61
KTN1-222	ENST00000555506	LAG3	P18627	525 aa		4.99	□□□□□ -1.61
KTN1-222	ENST00000555506	YY1	P25490	414 aa		4.99	□□□□□ -1.61
KTN1-222	ENST00000555506	CDK7	P50613	346 aa		4.99	□□□□□ -1.61
KTN1-222	ENST00000555506	SEC24C	P53992	1094 aa		4.99	□□□□□ -1.61
KTN1-222	ENST00000555506	TLE2	Q04725	743 aa		4.99	□□□□□ -1.61
KTN1-222	ENST00000555506	LMOD3	Q0VAK6	560 aa		4.99	□□□□□ -1.61
KTN1-222	ENST00000555506	DDX10	Q13206	875 aa	Known RBP	4.99	□□□□□ -1.61
KTN1-222	ENST00000555506	SIM2	Q14190	667 aa	Predicted RBP	4.99	□□□□□ -1.61
KTN1-222	ENST00000555506	RPS6KA2	Q15349	733 aa		4.99	□□□□□ -1.61
KTN1-222	ENST00000555506	MSANTD2	Q6P1R3	559 aa		4.99	□□□□□ -1.61
KTN1-222	ENST00000555506	RRAGA	Q7L523	313 aa		4.99	□□□□□ -1.61
KTN1-222	ENST00000555506	TRABD2A	Q86V40	505 aa		4.99	□□□□□ -1.61
KTN1-222	ENST00000555506	LDLRAD3	Q86YD5	345 aa		4.99	□□□□□ -1.61
KTN1-222	ENST00000555506	SYNE4	Q8N205	404 aa		4.99	□□□□□ -1.61
KTN1-222	ENST00000555506	ESX1	Q8N693	406 aa		4.99	□□□□□ -1.61
KTN1-222	ENST00000555506	METTL25	Q8N6Q8	603 aa		4.99	□□□□□ -1.61
KTN1-222	ENST00000555506	PPHLN1	Q8NEY8	458 aa	Known RBP	4.99	□□□□□ -1.61
KTN1-222	ENST00000555506	SSH3	Q8TE77	659 aa		4.99	□□□□□ -1.61
KTN1-222	ENST00000555506	SOCS4	Q8WXH5	440 aa		4.99	□□□□□ -1.61
KTN1-222	ENST00000555506	LPIN2	Q92539	896 aa		4.99	□□□□□ -1.61
KTN1-222	ENST00000555506	GLG1	Q92896	1179 aa		4.99	□□□□□ -1.61
KTN1-222	ENST00000555506	LENG9	Q96B70	501 aa		4.99	□□□□□ -1.61
KTN1-222	ENST00000555506	C3orf49	Q96BT1	292 aa		4.99	□□□□□ -1.61
KTN1-222	ENST00000555506	RSPRY1	Q96DX4	576 aa		4.99	□□□□□ -1.61
KTN1-222	ENST00000555506	PTCD3	Q96EY7	689 aa	Known RBP	4.99	□□□□□ -1.61
KTN1-222	ENST00000555506	SEC62	Q99442	399 aa	Known RBP	4.99	□□□□□ -1.61
KTN1-222	ENST00000555506	G6PC2	Q9NQR9	355 aa		4.99	□□□□□ -1.61
KTN1-222	ENST00000555506	IFT80	Q9P2H3	777 aa	Predicted RBP	4.99	□□□□□ -1.61
KTN1-222	ENST00000555506	NKX1-2	Q9UD57	310 aa	Predicted RBP	4.99	□□□□□ -1.61
KTN1-222	ENST00000555506	SLC13A4	Q9UKG4	626 aa		4.99	□□□□□ -1.61
KTN1-222	ENST00000555506	FZD1	Q9UP38	647 aa		4.99	□□□□□ -1.61
KTN1-222	ENST00000555506	TISP43	B9A030	160 aa		4.98	□□□□□ -1.61
KTN1-222	ENST00000555506	SLC16A3	O15427	465 aa	Known RBP	4.98	□□□□□ -1.61
KTN1-222	ENST00000555506	HOXC11	O43248	304 aa	Predicted RBP	4.98	□□□□□ -1.61
KTN1-222	ENST00000555506	PROM1	O43490	865 aa		4.98	□□□□□ -1.61
KTN1-222	ENST00000555506	WDR47	O94967	919 aa		4.98	□□□□□ -1.61
KTN1-222	ENST00000555506	SPDEF	O95238	335 aa		4.98	□□□□□ -1.61
KTN1-222	ENST00000555506	CER1	O95813	267 aa		4.98	□□□□□ -1.61
KTN1-222	ENST00000555506	JUP	P14923	745 aa		4.98	□□□□□ -1.61
KTN1-222	ENST00000555506	NXPH1	P58417	271 aa		4.98	□□□□□ -1.61
KTN1-222	ENST00000555506	GUCY1B3	Q02153	619 aa		4.98	□□□□□ -1.61
KTN1-222	ENST00000555506	SMN1	Q16637	294 aa	Known RBP	4.98	□□□□□ -1.61
KTN1-222	ENST00000555506	P3H1	Q32P28	736 aa		4.98	□□□□□ -1.61
KTN1-222	ENST00000555506	TMEM196	Q5HYL7	178 aa		4.98	□□□□□ -1.61
KTN1-222	ENST00000555506	TEDDM1	Q5T9Z0	273 aa		4.98	□□□□□ -1.61
KTN1-222	ENST00000555506	ANKS1B	Q7Z6G8	1248 aa		4.98	□□□□□ -1.61
KTN1-222	ENST00000555506	CAND1	Q86VP6	1230 aa	Known RBP	4.98	□□□□□ -1.61
KTN1-222	ENST00000555506	RAB11FIP4	Q86YS3	637 aa		4.98	□□□□□ -1.61
KTN1-222	ENST00000555506	ULK2	Q8IYT8	1036 aa		4.98	□□□□□ -1.61
KTN1-222	ENST00000555506	LNX2	Q8N448	690 aa		4.98	□□□□□ -1.61
KTN1-222	ENST00000555506	SUPT20H	Q8NEM7	779 aa		4.98	□□□□□ -1.61
KTN1-222	ENST00000555506	MYCBPAP	Q8TBZ2	947 aa		4.98	□□□□□ -1.61
KTN1-222	ENST00000555506	SKA1	Q96BD8	255 aa		4.98	□□□□□ -1.61
KTN1-222	ENST00000555506	MAEL	Q96JY0	434 aa	Known RBP	4.98	□□□□□ -1.61
KTN1-222	ENST00000555506	SENP7	Q9BQF6	1050 aa		4.98	□□□□□ -1.61
KTN1-222	ENST00000555506	RASSF1	Q9NS23	344 aa		4.98	□□□□□ -1.61
KTN1-222	ENST00000555506	TBCCD1	Q9NVR7	557 aa		4.98	□□□□□ -1.61
KTN1-222	ENST00000555506	NDUFAF4	Q9P032	175 aa		4.98	□□□□□ -1.61
KTN1-222	ENST00000555506	GXYLT2	A0PJZ3	443 aa		4.97	□□□□□ -1.61
KTN1-222	ENST00000555506	UNC119B	A6NIH7	251 aa		4.97	□□□□□ -1.61
KTN1-222	ENST00000555506		A8MVJ9	347 aa		4.97	□□□□□ -1.61
KTN1-222	ENST00000555506	KIF28P	B7ZC32	967 aa		4.97	□□□□□ -1.61
KTN1-222	ENST00000555506		E7EVH7	732 aa		4.97	□□□□□ -1.61
KTN1-222	ENST00000555506	PSMD9	O00233	223 aa		4.97	□□□□□ -1.61
KTN1-222	ENST00000555506	KIAA0355	O15063	1070 aa		4.97	□□□□□ -1.61
KTN1-222	ENST00000555506	LPXN	O60711	386 aa		4.97	□□□□□ -1.61
KTN1-222	ENST00000555506	LARGE1	O95461	756 aa		4.97	□□□□□ -1.61
KTN1-222	ENST00000555506	XBP1	P17861	261 aa		4.97	□□□□□ -1.61
KTN1-222	ENST00000555506	PBX1	P40424	430 aa		4.97	□□□□□ -1.61
KTN1-222	ENST00000555506	EIF4A1	P60842	406 aa	Known RBP	4.97	□□□□□ -1.61
KTN1-222	ENST00000555506	UBE3A	Q05086	875 aa		4.97	□□□□□ -1.61
KTN1-222	ENST00000555506	DPT	Q07507	201 aa		4.97	□□□□□ -1.61
KTN1-222	ENST00000555506	MTAP	Q13126	283 aa		4.97	□□□□□ -1.61
KTN1-222	ENST00000555506	EIF2B5	Q13144	721 aa	Known RBP	4.97	□□□□□ -1.61
KTN1-222	ENST00000555506	G3BP1	Q13283	466 aa	Known RBP eCLIP	4.97	□□□□□ -1.61
KTN1-222	ENST00000555506	TP53BP2	Q13625	1128 aa		4.97	□□□□□ -1.61
KTN1-222	ENST00000555506	SF3B3	Q15393	1217 aa	Known RBP	4.97	□□□□□ -1.61
KTN1-222	ENST00000555506	SMAD1	Q15797	465 aa	Known RBP	4.97	□□□□□ -1.61
KTN1-222	ENST00000555506	ST3GAL2	Q16842	350 aa		4.97	□□□□□ -1.61
KTN1-222	ENST00000555506	GALNTL6	Q49A17	601 aa		4.97	□□□□□ -1.61
KTN1-222	ENST00000555506	RETSAT	Q6NUM9	610 aa		4.97	□□□□□ -1.61
KTN1-222	ENST00000555506	VWA1	Q6PCB0	445 aa		4.97	□□□□□ -1.61
KTN1-222	ENST00000555506	PIK3AP1	Q6ZUJ8	805 aa		4.97	□□□□□ -1.61
KTN1-222	ENST00000555506	MAVS	Q7Z434	540 aa		4.97	□□□□□ -1.61
KTN1-222	ENST00000555506	GPR149	Q86SP6	731 aa		4.97	□□□□□ -1.61
KTN1-222	ENST00000555506	TMEM57	Q8N5G2	664 aa		4.97	□□□□□ -1.61
KTN1-222	ENST00000555506	PROKR1	Q8TCW9	393 aa		4.97	□□□□□ -1.61
KTN1-222	ENST00000555506	HMGB4	Q8WW32	186 aa		4.97	□□□□□ -1.61
KTN1-222	ENST00000555506	GOLGA1	Q92805	767 aa		4.97	□□□□□ -1.61
KTN1-222	ENST00000555506	FKBP10	Q96AY3	582 aa		4.97	□□□□□ -1.61
KTN1-222	ENST00000555506	COG8	Q96MW5	612 aa		4.97	□□□□□ -1.61
KTN1-222	ENST00000555506	PAAF1	Q9BRP4	392 aa		4.97	□□□□□ -1.61
KTN1-222	ENST00000555506	IKZF4	Q9H2S9	585 aa		4.97	□□□□□ -1.61
KTN1-222	ENST00000555506	ZHX3	Q9H4I2	956 aa		4.97	□□□□□ -1.61

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