RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 DNAJB7Q7Z6W7 309 aaPredicted RBP10.63□□□□□ -0.71
NEK9-205ENST00000555405 PPM1EQ8WY54 764 aa10.63□□□□□ -0.71
NEK9-205ENST00000555405 FUBP3Q96I24 572 aaKnown RBP eCLIP10.63□□□□□ -0.71
NEK9-205ENST00000555405 NR2E1Q9Y466 385 aa10.63□□□□□ -0.71
NEK9-205ENST00000555405 HEY1Q9Y5J3 304 aa10.63□□□□□ -0.71
NEK9-205ENST00000555405 UNC80Q8N2C7 3258 aa10.63□□□□□ -0.71
NEK9-205ENST00000555405 CCDC66A2RUB6 948 aa10.63□□□□□ -0.71
NEK9-205ENST00000555405 SP100P23497 879 aaPredicted RBP10.63□□□□□ -0.71
NEK9-205ENST00000555405 NOS2P35228 1153 aa10.63□□□□□ -0.71
NEK9-205ENST00000555405 TRIP13Q15645 432 aaPredicted RBP10.63□□□□□ -0.71
NEK9-205ENST00000555405 C1orf228Q6PIY5 440 aa10.63□□□□□ -0.71
NEK9-205ENST00000555405 ZNF354CQ86Y25 554 aa10.63□□□□□ -0.71
NEK9-205ENST00000555405 HS6ST3Q8IZP7 471 aa10.63□□□□□ -0.71
NEK9-205ENST00000555405 CCDC185Q8N715 623 aa10.63□□□□□ -0.71
NEK9-205ENST00000555405 NOA1Q8NC60 698 aaKnown RBP10.63□□□□□ -0.71
NEK9-205ENST00000555405 KLHL5Q96PQ7 755 aa10.63□□□□□ -0.71
NEK9-205ENST00000555405 HERC2P3Q9BVR0 1158 aa10.63□□□□□ -0.71
NEK9-205ENST00000555405 ZBP1Q9H171 429 aa10.63□□□□□ -0.71
NEK9-205ENST00000555405 ATXN3LQ9H3M9 355 aa10.63□□□□□ -0.71
NEK9-205ENST00000555405 WDCPQ9H6R7 721 aa10.63□□□□□ -0.71
NEK9-205ENST00000555405 HCFC1R1Q9NWW0 138 aa10.63□□□□□ -0.71
NEK9-205ENST00000555405 TCRBV5S1A1TA0A578 114 aa10.63□□□□□ -0.71
NEK9-205ENST00000555405 MIF4GDA9UHW6 222 aaKnown RBP10.63□□□□□ -0.71
NEK9-205ENST00000555405 TRDMT1O14717 391 aaKnown RBP10.63□□□□□ -0.71
NEK9-205ENST00000555405 SLC1A1P43005 524 aa10.63□□□□□ -0.71
NEK9-205ENST00000555405 NRIP1P48552 1158 aa10.63□□□□□ -0.71
NEK9-205ENST00000555405 NTHL1P78549 312 aa10.63□□□□□ -0.71
NEK9-205ENST00000555405 PPM1LQ5SGD2 360 aa10.63□□□□□ -0.71
NEK9-205ENST00000555405 PPP1R15BQ5SWA1 713 aa10.63□□□□□ -0.71
NEK9-205ENST00000555405 DCAF12L1Q5VU92 463 aa10.63□□□□□ -0.71
NEK9-205ENST00000555405 SLFN11Q7Z7L1 901 aa10.63□□□□□ -0.71
NEK9-205ENST00000555405 TAC4Q86UU9 113 aa10.63□□□□□ -0.71
NEK9-205ENST00000555405 CREG2Q8IUH2 290 aa10.63□□□□□ -0.71
NEK9-205ENST00000555405 MRPL43Q8N983 215 aaKnown RBP10.63□□□□□ -0.71
NEK9-205ENST00000555405 CASP10Q92851 521 aa10.63□□□□□ -0.71
NEK9-205ENST00000555405 CLP1Q92989 425 aaKnown RBP10.63□□□□□ -0.71
NEK9-205ENST00000555405 HES6Q96HZ4 224 aa10.63□□□□□ -0.71
NEK9-205ENST00000555405 CCDC114Q96M63 670 aa10.63□□□□□ -0.71
NEK9-205ENST00000555405 PEBP4Q96S96 227 aa10.63□□□□□ -0.71
NEK9-205ENST00000555405 PLVAPQ9BX97 442 aa10.63□□□□□ -0.71
NEK9-205ENST00000555405 FBXO44Q9H4M3 255 aa10.63□□□□□ -0.71
NEK9-205ENST00000555405 GKN1Q9NS71 199 aa10.63□□□□□ -0.71
NEK9-205ENST00000555405 PIGVQ9NUD9 493 aa10.63□□□□□ -0.71
NEK9-205ENST00000555405 OSER1Q9NX31 292 aa10.63□□□□□ -0.71
NEK9-205ENST00000555405 BACE2Q9Y5Z0 518 aa10.63□□□□□ -0.71
NEK9-205ENST00000555405 PGRMC1O00264 195 aaKnown RBP10.62□□□□□ -0.71
NEK9-205ENST00000555405 SART1O43290 800 aaKnown RBP10.62□□□□□ -0.71
NEK9-205ENST00000555405 GABRR2P28476 465 aa10.62□□□□□ -0.71
NEK9-205ENST00000555405 HDAC4P56524 1084 aa10.62□□□□□ -0.71
NEK9-205ENST00000555405 CYP4F8P98187 520 aa10.62□□□□□ -0.71
NEK9-205ENST00000555405 AMPD2Q01433 879 aa10.62□□□□□ -0.71
NEK9-205ENST00000555405 SCD5Q86SK9 330 aa10.62□□□□□ -0.71
NEK9-205ENST00000555405 DQX1Q8TE96 717 aaKnown RBP10.62□□□□□ -0.71
NEK9-205ENST00000555405 KCTD13Q8WZ19 329 aa10.62□□□□□ -0.71
NEK9-205ENST00000555405 MAGOHBQ96A72 148 aaKnown RBP10.62□□□□□ -0.71
NEK9-205ENST00000555405 SNRNP25Q9BV90 132 aaKnown RBP10.62□□□□□ -0.71
NEK9-205ENST00000555405 CSNK1G1Q9HCP0 422 aa10.62□□□□□ -0.71
NEK9-205ENST00000555405 ABCB6Q9NP58 842 aa10.62□□□□□ -0.71
NEK9-205ENST00000555405 RBM12Q9NTZ6 932 aaKnown RBP10.62□□□□□ -0.71
NEK9-205ENST00000555405 TRPM5Q9NZQ8 1165 aa10.62□□□□□ -0.71
NEK9-205ENST00000555405 PCDHA3Q9Y5H8 950 aa10.62□□□□□ -0.71
NEK9-205ENST00000555405 TLR5O60602 858 aa10.62□□□□□ -0.71
NEK9-205ENST00000555405 FYNP06241 537 aa10.62□□□□□ -0.71
NEK9-205ENST00000555405 CBX2Q14781 532 aaPredicted RBP10.62□□□□□ -0.71
NEK9-205ENST00000555405 TXNDC8Q6A555 127 aa10.62□□□□□ -0.71
NEK9-205ENST00000555405 ADGRD2Q7Z7M1 963 aa10.62□□□□□ -0.71
NEK9-205ENST00000555405 CEP112Q8N8E3 955 aa10.62□□□□□ -0.71
NEK9-205ENST00000555405 MAB21L3Q8N8X9 362 aa10.62□□□□□ -0.71
NEK9-205ENST00000555405 ING5Q8WYH8 240 aa10.62□□□□□ -0.71
NEK9-205ENST00000555405 DDX23Q9BUQ8 820 aaKnown RBP10.62□□□□□ -0.71
NEK9-205ENST00000555405 OSBPL8Q9BZF1 889 aa10.62□□□□□ -0.71
NEK9-205ENST00000555405 TKTL2Q9H0I9 626 aa10.62□□□□□ -0.71
NEK9-205ENST00000555405 TLR8Q9NR97 1041 aaKnown RBP10.62□□□□□ -0.71
NEK9-205ENST00000555405 CALCOCO1Q9P1Z2 691 aa10.62□□□□□ -0.71
NEK9-205ENST00000555405 CDH22Q9UJ99 828 aa10.62□□□□□ -0.71
NEK9-205ENST00000555405 INSL5Q9Y5Q6 135 aa10.62□□□□□ -0.71
NEK9-205ENST00000555405 TANC1Q9C0D5 1861 aa10.62□□□□□ -0.71
NEK9-205ENST00000555405 ALPK3Q96L96 1907 aa10.62□□□□□ -0.71
NEK9-205ENST00000555405 C2orf71A6NGG8 1288 aa10.62□□□□□ -0.71
NEK9-205ENST00000555405 TBC1D4O60343 1298 aa10.62□□□□□ -0.71
NEK9-205ENST00000555405 IFNB1P01574 187 aa10.62□□□□□ -0.71
NEK9-205ENST00000555405 CKAP4Q07065 602 aaKnown RBP10.62□□□□□ -0.71
NEK9-205ENST00000555405 RAB33AQ14088 237 aa10.62□□□□□ -0.71
NEK9-205ENST00000555405 ELF2Q15723 593 aa10.62□□□□□ -0.71
NEK9-205ENST00000555405 WHAMMP3Q1A5X7 153 aa10.62□□□□□ -0.71
NEK9-205ENST00000555405 ZC3H18Q86VM9 953 aaKnown RBP10.62□□□□□ -0.71
NEK9-205ENST00000555405 MON1AQ86VX9 555 aa10.62□□□□□ -0.71
NEK9-205ENST00000555405 ZDHHC17Q8IUH5 632 aa10.62□□□□□ -0.71
NEK9-205ENST00000555405 SPATA18Q8TC71 538 aa10.62□□□□□ -0.71
NEK9-205ENST00000555405 PBKQ96KB5 322 aa10.62□□□□□ -0.71
NEK9-205ENST00000555405 XPO7Q9UIA9 1087 aaKnown RBP10.62□□□□□ -0.71
NEK9-205ENST00000555405 AP4E1Q9UPM8 1137 aa10.62□□□□□ -0.71
NEK9-205ENST00000555405 PDCD11Q14690 1871 aaKnown RBP10.61□□□□□ -0.71
NEK9-205ENST00000555405 VWA8A3KMH1 1905 aa10.61□□□□□ -0.71
NEK9-205ENST00000555405 A0A1W2PRU2 124 aa10.61□□□□□ -0.71
NEK9-205ENST00000555405 F5H423 210 aaPredicted RBP10.61□□□□□ -0.71
NEK9-205ENST00000555405 TNFRSF10BO14763 440 aa10.61□□□□□ -0.71
NEK9-205ENST00000555405 CST8O60676 142 aa10.61□□□□□ -0.71
NEK9-205ENST00000555405 MTA2O94776 668 aa10.61□□□□□ -0.71
NEK9-205ENST00000555405 KRT7P08729 469 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms