RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 SNX25Q9H3E2 840 aa18.17■□□□□ 0.5
SHOX-204ENST00000554971 WHRNQ9P202 907 aa18.17■□□□□ 0.5
SHOX-204ENST00000554971 SNX24Q9Y343 169 aa18.17■□□□□ 0.5
SHOX-204ENST00000554971 GREB1Q4ZG55 1949 aa18.17■□□□□ 0.5
SHOX-204ENST00000554971 ECEL1O95672 775 aa18.17■□□□□ 0.5
SHOX-204ENST00000554971 RARAP10276 462 aa18.17■□□□□ 0.5
SHOX-204ENST00000554971 CPB1P15086 417 aa18.17■□□□□ 0.5
SHOX-204ENST00000554971 PCSK1P29120 753 aa18.17■□□□□ 0.5
SHOX-204ENST00000554971 LTBRP36941 435 aa18.17■□□□□ 0.5
SHOX-204ENST00000554971 NSFP46459 744 aaKnown RBP18.17■□□□□ 0.5
SHOX-204ENST00000554971 MARCKSL1P49006 195 aa18.17■□□□□ 0.5
SHOX-204ENST00000554971 CAV1Q03135 178 aa18.17■□□□□ 0.5
SHOX-204ENST00000554971 DLX2Q07687 328 aaPredicted RBP18.17■□□□□ 0.5
SHOX-204ENST00000554971 ZNF394Q53GI3 561 aa18.17■□□□□ 0.5
SHOX-204ENST00000554971 C6orf118Q5T5N4 469 aa18.17■□□□□ 0.5
SHOX-204ENST00000554971 LLGL2Q6P1M3 1020 aa18.17■□□□□ 0.5
SHOX-204ENST00000554971 ADAT2Q7Z6V5 191 aaKnown RBP18.17■□□□□ 0.5
SHOX-204ENST00000554971 TTC9BQ8N6N2 239 aa18.17■□□□□ 0.5
SHOX-204ENST00000554971 EFHBQ8N7U6 833 aa18.17■□□□□ 0.5
SHOX-204ENST00000554971 C12orf29Q8N999 325 aa18.17■□□□□ 0.5
SHOX-204ENST00000554971 OXCT2Q9BYC2 517 aaPredicted RBP18.17■□□□□ 0.5
SHOX-204ENST00000554971 NOTCH4Q99466 2003 aa18.16■□□□□ 0.5
SHOX-204ENST00000554971 SEC24AO95486 1093 aa18.16■□□□□ 0.5
SHOX-204ENST00000554971 GLUD1P00367 558 aa18.16■□□□□ 0.5
SHOX-204ENST00000554971 ATF2P15336 505 aa18.16■□□□□ 0.5
SHOX-204ENST00000554971 ITIH2P19823 946 aa18.16■□□□□ 0.5
SHOX-204ENST00000554971 ADCY2Q08462 1091 aa18.16■□□□□ 0.5
SHOX-204ENST00000554971 TRMT10CQ7L0Y3 403 aaKnown RBP18.16■□□□□ 0.5
SHOX-204ENST00000554971 ACOT1Q86TX2 421 aa18.16■□□□□ 0.5
SHOX-204ENST00000554971 NLRP14Q86W24 1093 aa18.16■□□□□ 0.5
SHOX-204ENST00000554971 UNC93AQ86WB7 457 aa18.16■□□□□ 0.5
SHOX-204ENST00000554971 SLC4A11Q8NBS3 891 aa18.16■□□□□ 0.5
SHOX-204ENST00000554971 ATAD1Q8NBU5 361 aa18.16■□□□□ 0.5
SHOX-204ENST00000554971 B3GALNT2Q8NCR0 500 aa18.16■□□□□ 0.5
SHOX-204ENST00000554971 OR2W6PQ8NHA6 318 aa18.16■□□□□ 0.5
SHOX-204ENST00000554971 FBXO25Q8TCJ0 367 aa18.16■□□□□ 0.5
SHOX-204ENST00000554971 CDCA3Q99618 268 aaPredicted RBP18.16■□□□□ 0.5
SHOX-204ENST00000554971 ROPN1BQ9BZX4 212 aaPredicted RBP18.16■□□□□ 0.5
SHOX-204ENST00000554971 CENPHQ9H3R5 247 aa18.16■□□□□ 0.5
SHOX-204ENST00000554971 ROPN1Q9HAT0 212 aaPredicted RBP18.16■□□□□ 0.5
SHOX-204ENST00000554971 ANAPC7Q9UJX3 599 aa18.16■□□□□ 0.5
SHOX-204ENST00000554971 FBXW11Q9UKB1 542 aa18.16■□□□□ 0.5
SHOX-204ENST00000554971 CDH9Q9ULB4 789 aa18.16■□□□□ 0.5
SHOX-204ENST00000554971 FAM169AQ9Y6X4 670 aa18.16■□□□□ 0.5
SHOX-204ENST00000554971 NCOR1O75376 2440 aa18.16■□□□□ 0.5
SHOX-204ENST00000554971 ZNF638Q14966 1978 aaKnown RBP18.16■□□□□ 0.5
SHOX-204ENST00000554971 MTMR11A4FU01 709 aa18.15■□□□□ 0.5
SHOX-204ENST00000554971 GMNCA6NCL1 334 aa18.15■□□□□ 0.5
SHOX-204ENST00000554971 TBX10O75333 385 aa18.15■□□□□ 0.5
SHOX-204ENST00000554971 RPL21P46778 160 aaKnown RBP18.15■□□□□ 0.5
SHOX-204ENST00000554971 RAD23BP54727 409 aa18.15■□□□□ 0.5
SHOX-204ENST00000554971 ADCY1Q08828 1119 aa18.15■□□□□ 0.5
SHOX-204ENST00000554971 CALCOCO2Q13137 446 aa18.15■□□□□ 0.5
SHOX-204ENST00000554971 ADAM15Q13444 863 aa18.15■□□□□ 0.5
SHOX-204ENST00000554971 TTC27Q6P3X3 843 aa18.15■□□□□ 0.5
SHOX-204ENST00000554971 PHF13Q86YI8 300 aaPredicted RBP18.15■□□□□ 0.5
SHOX-204ENST00000554971 ZDHHC14Q8IZN3 488 aa18.15■□□□□ 0.5
SHOX-204ENST00000554971 CRYBG2Q8N1P7 616 aa18.15■□□□□ 0.5
SHOX-204ENST00000554971 PPP2R3CQ969Q6 453 aa18.15■□□□□ 0.5
SHOX-204ENST00000554971 PCED1BQ96HM7 432 aa18.15■□□□□ 0.5
SHOX-204ENST00000554971 CCT8L2Q96SF2 557 aa18.15■□□□□ 0.5
SHOX-204ENST00000554971 ACP6Q9NPH0 428 aa18.15■□□□□ 0.5
SHOX-204ENST00000554971 NOVA2Q9UNW9 492 aaKnown RBP18.15■□□□□ 0.5
SHOX-204ENST00000554971 SCINQ9Y6U3 715 aa18.15■□□□□ 0.5
SHOX-204ENST00000554971 ATMINO43313 823 aaPredicted RBP18.15■□□□□ 0.5
SHOX-204ENST00000554971 PSTPIP1O43586 416 aa18.15■□□□□ 0.5
SHOX-204ENST00000554971 PTPN1P18031 435 aaKnown RBP18.15■□□□□ 0.5
SHOX-204ENST00000554971 ZNF132P52740 706 aa18.15■□□□□ 0.5
SHOX-204ENST00000554971 TSPY1Q01534 308 aa18.15■□□□□ 0.5
SHOX-204ENST00000554971 TMEM270Q6UE05 265 aa18.15■□□□□ 0.5
SHOX-204ENST00000554971 TMEM184AQ6ZMB5 413 aa18.15■□□□□ 0.5
SHOX-204ENST00000554971 C10orf67Q8IYJ2 551 aa18.15■□□□□ 0.5
SHOX-204ENST00000554971 MYCBPAPQ8TBZ2 947 aa18.15■□□□□ 0.5
SHOX-204ENST00000554971 NT5C1AQ9BXI3 368 aa18.15■□□□□ 0.5
SHOX-204ENST00000554971 RHOBTB2Q9BYZ6 727 aa18.15■□□□□ 0.5
SHOX-204ENST00000554971 FAM124BQ9H5Z6 455 aaPredicted RBP18.15■□□□□ 0.5
SHOX-204ENST00000554971 MAN1C1Q9NR34 630 aa18.15■□□□□ 0.5
SHOX-204ENST00000554971 TMEM30AQ9NV96 361 aa18.15■□□□□ 0.5
SHOX-204ENST00000554971 CLEC1BQ9P126 229 aa18.15■□□□□ 0.5
SHOX-204ENST00000554971 AFF4Q9UHB7 1163 aaKnown RBP18.15■□□□□ 0.5
SHOX-204ENST00000554971 PROSCO94903 275 aa18.14■□□□□ 0.49
SHOX-204ENST00000554971 CPP00450 1065 aa18.14■□□□□ 0.49
SHOX-204ENST00000554971 CALCAP01258 141 aa18.14■□□□□ 0.49
SHOX-204ENST00000554971 HPDP32754 393 aaPredicted RBP18.14■□□□□ 0.49
SHOX-204ENST00000554971 C1QBPQ07021 282 aaKnown RBP18.14■□□□□ 0.49
SHOX-204ENST00000554971 MDH1BQ5I0G3 518 aa18.14■□□□□ 0.49
SHOX-204ENST00000554971 TPGS2Q68CL5 300 aa18.14■□□□□ 0.49
SHOX-204ENST00000554971 TTC19Q6DKK2 380 aaPredicted RBP18.14■□□□□ 0.49
SHOX-204ENST00000554971 AADACL2Q6P093 401 aa18.14■□□□□ 0.49
SHOX-204ENST00000554971 PAQR9Q6ZVX9 377 aa18.14■□□□□ 0.49
SHOX-204ENST00000554971 MON1BQ7L1V2 547 aa18.14■□□□□ 0.49
SHOX-204ENST00000554971 KREMEN2Q8NCW0 462 aa18.14■□□□□ 0.49
SHOX-204ENST00000554971 BBOF1Q8ND07 529 aa18.14■□□□□ 0.49
SHOX-204ENST00000554971 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.14■□□□□ 0.49
SHOX-204ENST00000554971 ZNF473Q8WTR7 871 aaKnown RBP18.14■□□□□ 0.49
SHOX-204ENST00000554971 EPB41L4BQ9H329 900 aa18.14■□□□□ 0.49
SHOX-204ENST00000554971 RFPL2O75678 378 aa18.13■□□□□ 0.49
SHOX-204ENST00000554971 C1RP00736 705 aa18.13■□□□□ 0.49
SHOX-204ENST00000554971 AGTP01019 485 aa18.13■□□□□ 0.49
SHOX-204ENST00000554971 MAGOHP61326 146 aaKnown RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms