RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 TMC2Q8TDI7 906 aa11.17□□□□□ -0.62
SHMT2-215ENST00000554656 P2RY11Q96G91 374 aa11.17□□□□□ -0.62
SHMT2-215ENST00000554656 MRFAP1L1Q96HT8 127 aa11.17□□□□□ -0.62
SHMT2-215ENST00000554656 TNIP3Q96KP6 325 aa11.17□□□□□ -0.62
SHMT2-215ENST00000554656 DUSP9Q99956 384 aaKnown RBP11.17□□□□□ -0.62
SHMT2-215ENST00000554656 APOBEC3GQ9HC16 384 aaKnown RBP11.17□□□□□ -0.62
SHMT2-215ENST00000554656 SPHK2Q9NRA0 654 aa11.17□□□□□ -0.62
SHMT2-215ENST00000554656 TBC1D14Q9P2M4 693 aa11.17□□□□□ -0.62
SHMT2-215ENST00000554656 ZFHX4Q86UP3 3567 aa11.17□□□□□ -0.62
SHMT2-215ENST00000554656 AKAP13Q12802 2813 aa11.17□□□□□ -0.62
SHMT2-215ENST00000554656 IGF2RP11717 2491 aa11.16□□□□□ -0.62
SHMT2-215ENST00000554656 BICDL2A1A5D9 508 aa11.16□□□□□ -0.62
SHMT2-215ENST00000554656 PDXKO00764 312 aa11.16□□□□□ -0.62
SHMT2-215ENST00000554656 PSMA7O14818 248 aa11.16□□□□□ -0.62
SHMT2-215ENST00000554656 CYP26A1O43174 497 aa11.16□□□□□ -0.62
SHMT2-215ENST00000554656 CBFA2T2O43439 604 aa11.16□□□□□ -0.62
SHMT2-215ENST00000554656 TLR5O60602 858 aa11.16□□□□□ -0.62
SHMT2-215ENST00000554656 CLSTN1O94985 981 aa11.16□□□□□ -0.62
SHMT2-215ENST00000554656 TRIM49P0CI25 452 aa11.16□□□□□ -0.62
SHMT2-215ENST00000554656 TRIM49CP0CI26 452 aa11.16□□□□□ -0.62
SHMT2-215ENST00000554656 PIK3CAP42336 1068 aa11.16□□□□□ -0.62
SHMT2-215ENST00000554656 TNFRSF4P43489 277 aa11.16□□□□□ -0.62
SHMT2-215ENST00000554656 MAP3K7CLP57077 242 aa11.16□□□□□ -0.62
SHMT2-215ENST00000554656 IRX4P78413 519 aa11.16□□□□□ -0.62
SHMT2-215ENST00000554656 SHC2P98077 582 aa11.16□□□□□ -0.62
SHMT2-215ENST00000554656 INCA1Q0VD86 236 aa11.16□□□□□ -0.62
SHMT2-215ENST00000554656 PAK1Q13153 545 aa11.16□□□□□ -0.62
SHMT2-215ENST00000554656 ST3GAL2Q16842 350 aa11.16□□□□□ -0.62
SHMT2-215ENST00000554656 MAP7D1Q3KQU3 841 aa11.16□□□□□ -0.62
SHMT2-215ENST00000554656 HSF5Q4G112 596 aaPredicted RBP11.16□□□□□ -0.62
SHMT2-215ENST00000554656 GUF1Q8N442 669 aaKnown RBP11.16□□□□□ -0.62
SHMT2-215ENST00000554656 TERB1Q8NA31 727 aa11.16□□□□□ -0.62
SHMT2-215ENST00000554656 HMGB4Q8WW32 186 aa11.16□□□□□ -0.62
SHMT2-215ENST00000554656 OTUB2Q96DC9 234 aa11.16□□□□□ -0.62
SHMT2-215ENST00000554656 KLF16Q9BXK1 252 aaPredicted RBP11.16□□□□□ -0.62
SHMT2-215ENST00000554656 CD248Q9HCU0 757 aa11.16□□□□□ -0.62
SHMT2-215ENST00000554656 ANGPTL2Q9UKU9 493 aa11.16□□□□□ -0.62
SHMT2-215ENST00000554656 PCNX2A6NKB5 2137 aa11.15□□□□□ -0.62
SHMT2-215ENST00000554656 ATXN2Q99700 1313 aaKnown RBP11.15□□□□□ -0.62
SHMT2-215ENST00000554656 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.15□□□□□ -0.62
SHMT2-215ENST00000554656 TCRBV21S2A2A0A5A6 115 aa11.15□□□□□ -0.62
SHMT2-215ENST00000554656 MDM4O15151 490 aa11.15□□□□□ -0.62
SHMT2-215ENST00000554656 CD44P16070 742 aaKnown RBP11.15□□□□□ -0.62
SHMT2-215ENST00000554656 ZNF18P17022 549 aa11.15□□□□□ -0.62
SHMT2-215ENST00000554656 ADORA2BP29275 332 aa11.15□□□□□ -0.62
SHMT2-215ENST00000554656 PRCPP42785 496 aa11.15□□□□□ -0.62
SHMT2-215ENST00000554656 PTGER3P43115 390 aa11.15□□□□□ -0.62
SHMT2-215ENST00000554656 DHPSP49366 369 aaPredicted RBP11.15□□□□□ -0.62
SHMT2-215ENST00000554656 ZNF75DP51815 510 aa11.15□□□□□ -0.62
SHMT2-215ENST00000554656 GAD2Q05329 585 aa11.15□□□□□ -0.62
SHMT2-215ENST00000554656 PPP3CAQ08209 521 aa11.15□□□□□ -0.62
SHMT2-215ENST00000554656 SGSM1Q2NKQ1 1148 aa11.15□□□□□ -0.62
SHMT2-215ENST00000554656 EOGTQ5NDL2 527 aa11.15□□□□□ -0.62
SHMT2-215ENST00000554656 EGFLAMQ63HQ2 1017 aa11.15□□□□□ -0.62
SHMT2-215ENST00000554656 CEP135Q66GS9 1140 aa11.15□□□□□ -0.62
SHMT2-215ENST00000554656 CLEC20AQ6ZU45 233 aa11.15□□□□□ -0.62
SHMT2-215ENST00000554656 ARMCX6Q7L4S7 300 aa11.15□□□□□ -0.62
SHMT2-215ENST00000554656 C11orf74Q86VG3 221 aa11.15□□□□□ -0.62
SHMT2-215ENST00000554656 UNC93AQ86WB7 457 aa11.15□□□□□ -0.62
SHMT2-215ENST00000554656 TMEFF1Q8IYR6 380 aa11.15□□□□□ -0.62
SHMT2-215ENST00000554656 WHAMMQ8TF30 809 aa11.15□□□□□ -0.62
SHMT2-215ENST00000554656 PIGKQ92643 395 aa11.15□□□□□ -0.62
SHMT2-215ENST00000554656 JAKMIP2Q96AA8 810 aa11.15□□□□□ -0.62
SHMT2-215ENST00000554656 ACOX2Q99424 681 aa11.15□□□□□ -0.62
SHMT2-215ENST00000554656 TRIM5Q9C035 493 aa11.15□□□□□ -0.62
SHMT2-215ENST00000554656 NMUR1Q9HB89 426 aa11.15□□□□□ -0.62
SHMT2-215ENST00000554656 CYLDQ9NQC7 956 aa11.15□□□□□ -0.62
SHMT2-215ENST00000554656 TMEM74BQ9NUR3 256 aa11.15□□□□□ -0.62
SHMT2-215ENST00000554656 COMMD8Q9NX08 183 aa11.15□□□□□ -0.62
SHMT2-215ENST00000554656 WASF3Q9UPY6 502 aa11.15□□□□□ -0.62
SHMT2-215ENST00000554656 SCML2Q9UQR0 700 aa11.15□□□□□ -0.62
SHMT2-215ENST00000554656 TRAF3IP3Q9Y228 551 aa11.15□□□□□ -0.62
SHMT2-215ENST00000554656 SH3BP1Q9Y3L3 701 aa11.15□□□□□ -0.62
SHMT2-215ENST00000554656 NFE2L3Q9Y4A8 694 aa11.15□□□□□ -0.62
SHMT2-215ENST00000554656 CKAP5Q14008 2032 aa11.14□□□□□ -0.63
SHMT2-215ENST00000554656 ZZEF1O43149 2961 aa11.14□□□□□ -0.63
SHMT2-215ENST00000554656 A0A1W2PQF6 199 aa11.14□□□□□ -0.63
SHMT2-215ENST00000554656 GOLGA6L6A8MZA4 724 aa11.14□□□□□ -0.63
SHMT2-215ENST00000554656 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.14□□□□□ -0.63
SHMT2-215ENST00000554656 KHNYNO15037 678 aaKnown RBP11.14□□□□□ -0.63
SHMT2-215ENST00000554656 AP5Z1O43299 807 aa11.14□□□□□ -0.63
SHMT2-215ENST00000554656 CACNG3O60359 315 aa11.14□□□□□ -0.63
SHMT2-215ENST00000554656 ALDH1A2O94788 518 aa11.14□□□□□ -0.63
SHMT2-215ENST00000554656 TPM3P06753 285 aa11.14□□□□□ -0.63
SHMT2-215ENST00000554656 FAM200BP0CF97 657 aa11.14□□□□□ -0.63
SHMT2-215ENST00000554656 P4HA1P13674 534 aa11.14□□□□□ -0.63
SHMT2-215ENST00000554656 GABRG2P18507 467 aa11.14□□□□□ -0.63
SHMT2-215ENST00000554656 WASP42768 502 aa11.14□□□□□ -0.63
SHMT2-215ENST00000554656 NOVA1P51513 510 aaKnown RBP11.14□□□□□ -0.63
SHMT2-215ENST00000554656 VAMP7P51809 220 aa11.14□□□□□ -0.63
SHMT2-215ENST00000554656 NFIL3Q16649 462 aa11.14□□□□□ -0.63
SHMT2-215ENST00000554656 C10orf76Q5T2E6 689 aa11.14□□□□□ -0.63
SHMT2-215ENST00000554656 CDKAL1Q5VV42 579 aa11.14□□□□□ -0.63
SHMT2-215ENST00000554656 KIAA1211LQ6NV74 962 aa11.14□□□□□ -0.63
SHMT2-215ENST00000554656 TOGARAM2Q6ZUX3 1019 aa11.14□□□□□ -0.63
SHMT2-215ENST00000554656 HTR3DQ70Z44 454 aa11.14□□□□□ -0.63
SHMT2-215ENST00000554656 SCD5Q86SK9 330 aa11.14□□□□□ -0.63
SHMT2-215ENST00000554656 ZNF513Q8N8E2 541 aaPredicted RBP11.14□□□□□ -0.63
SHMT2-215ENST00000554656 TAS1R2Q8TE23 839 aa11.14□□□□□ -0.63
SHMT2-215ENST00000554656 NELFBQ8WX92 580 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms