RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 IFIT3O14879 490 aaKnown RBP5.46□□□□□ -1.54
ATXN3-228ENST00000554592 HIP1RO75146 1068 aa5.46□□□□□ -1.54
ATXN3-228ENST00000554592 GPR32O75388 356 aa5.46□□□□□ -1.54
ATXN3-228ENST00000554592 C4BPAP04003 597 aaKnown RBP5.46□□□□□ -1.54
ATXN3-228ENST00000554592 S100BP04271 92 aaPredicted RBP5.46□□□□□ -1.54
ATXN3-228ENST00000554592 ADRB1P08588 477 aa5.46□□□□□ -1.54
ATXN3-228ENST00000554592 PTPN1P18031 435 aaKnown RBP5.46□□□□□ -1.54
ATXN3-228ENST00000554592 KLRC2P26717 231 aa5.46□□□□□ -1.54
ATXN3-228ENST00000554592 METAP2P50579 478 aaKnown RBP eCLIP5.46□□□□□ -1.54
ATXN3-228ENST00000554592 KIF11P52732 1056 aa5.46□□□□□ -1.54
ATXN3-228ENST00000554592 ITKQ08881 620 aa5.46□□□□□ -1.54
ATXN3-228ENST00000554592 TRDNQ13061 729 aa5.46□□□□□ -1.54
ATXN3-228ENST00000554592 PTPN14Q15678 1187 aa5.46□□□□□ -1.54
ATXN3-228ENST00000554592 ZNF174Q15697 407 aa5.46□□□□□ -1.54
ATXN3-228ENST00000554592 CLLU1OSQ5K130 101 aa5.46□□□□□ -1.54
ATXN3-228ENST00000554592 FAM160B1Q5W0V3 765 aa5.46□□□□□ -1.54
ATXN3-228ENST00000554592 BTBD8Q5XKL5 378 aa5.46□□□□□ -1.54
ATXN3-228ENST00000554592 DCLRE1AQ6PJP8 1040 aa5.46□□□□□ -1.54
ATXN3-228ENST00000554592 CATIPQ7Z7H3 387 aa5.46□□□□□ -1.54
ATXN3-228ENST00000554592 TRIM48Q8IWZ4 208 aa5.46□□□□□ -1.54
ATXN3-228ENST00000554592 RNF169Q8NCN4 708 aa5.46□□□□□ -1.54
ATXN3-228ENST00000554592 CMASQ8NFW8 434 aaPredicted RBP5.46□□□□□ -1.54
ATXN3-228ENST00000554592 ADAMTS17Q8TE56 1095 aa5.46□□□□□ -1.54
ATXN3-228ENST00000554592 RSAD2Q8WXG1 361 aa5.46□□□□□ -1.54
ATXN3-228ENST00000554592 PIBF1Q8WXW3 757 aa5.46□□□□□ -1.54
ATXN3-228ENST00000554592 AUTS2Q8WXX7 1259 aa5.46□□□□□ -1.54
ATXN3-228ENST00000554592 SLC5A5Q92911 643 aa5.46□□□□□ -1.54
ATXN3-228ENST00000554592 RILPL2Q969X0 211 aa5.46□□□□□ -1.54
ATXN3-228ENST00000554592 RRP36Q96EU6 259 aaKnown RBP5.46□□□□□ -1.54
ATXN3-228ENST00000554592 IGSF21Q96ID5 467 aa5.46□□□□□ -1.54
ATXN3-228ENST00000554592 KLHL5Q96PQ7 755 aa5.46□□□□□ -1.54
ATXN3-228ENST00000554592 CEP89Q96ST8 783 aa5.46□□□□□ -1.54
ATXN3-228ENST00000554592 MXRA8Q9BRK3 442 aa5.46□□□□□ -1.54
ATXN3-228ENST00000554592 LZTS2Q9BRK4 669 aa5.46□□□□□ -1.54
ATXN3-228ENST00000554592 RHOBTB2Q9BYZ6 727 aa5.46□□□□□ -1.54
ATXN3-228ENST00000554592 WDR6Q9NNW5 1121 aaKnown RBP5.46□□□□□ -1.54
ATXN3-228ENST00000554592 KCNH7Q9NS40 1196 aa5.46□□□□□ -1.54
ATXN3-228ENST00000554592 EPS15L1Q9UBC2 864 aa5.46□□□□□ -1.54
ATXN3-228ENST00000554592 DPP7Q9UHL4 492 aa5.46□□□□□ -1.54
ATXN3-228ENST00000554592 FBXO4Q9UKT5 387 aa5.46□□□□□ -1.54
ATXN3-228ENST00000554592 PCDHA6Q9UN73 950 aa5.46□□□□□ -1.54
ATXN3-228ENST00000554592 G3BP2Q9UN86 482 aaKnown RBP5.46□□□□□ -1.54
ATXN3-228ENST00000554592 NUB1Q9Y5A7 615 aa5.46□□□□□ -1.54
ATXN3-228ENST00000554592 NFASCO94856 1347 aa5.46□□□□□ -1.54
ATXN3-228ENST00000554592 COL1A2P08123 1366 aa5.45□□□□□ -1.54
ATXN3-228ENST00000554592 ACOT7O00154 380 aa5.45□□□□□ -1.54
ATXN3-228ENST00000554592 HIP1O00291 1037 aa5.45□□□□□ -1.54
ATXN3-228ENST00000554592 MAGEB2O15479 319 aa5.45□□□□□ -1.54
ATXN3-228ENST00000554592 LAMTOR5O43504 91 aa5.45□□□□□ -1.54
ATXN3-228ENST00000554592 TBC1D4O60343 1298 aa5.45□□□□□ -1.54
ATXN3-228ENST00000554592 ULK1O75385 1050 aa5.45□□□□□ -1.54
ATXN3-228ENST00000554592 ALDH2P05091 517 aa5.45□□□□□ -1.54
ATXN3-228ENST00000554592 GALTP07902 379 aa5.45□□□□□ -1.54
ATXN3-228ENST00000554592 PTX3P26022 381 aaPredicted RBP5.45□□□□□ -1.54
ATXN3-228ENST00000554592 TMOD1P28289 359 aa5.45□□□□□ -1.54
ATXN3-228ENST00000554592 BUD31P41223 144 aaPredicted RBP5.45□□□□□ -1.54
ATXN3-228ENST00000554592 GNAQP50148 359 aa5.45□□□□□ -1.54
ATXN3-228ENST00000554592 CLCN4P51793 760 aa5.45□□□□□ -1.54
ATXN3-228ENST00000554592 STARD6P59095 220 aa5.45□□□□□ -1.54
ATXN3-228ENST00000554592 GRIN1Q05586 938 aa5.45□□□□□ -1.54
ATXN3-228ENST00000554592 WTAPQ15007 396 aa5.45□□□□□ -1.54
ATXN3-228ENST00000554592 TERF2Q15554 542 aa5.45□□□□□ -1.54
ATXN3-228ENST00000554592 BROXQ5VW32 411 aa5.45□□□□□ -1.54
ATXN3-228ENST00000554592 MIS18BP1Q6P0N0 1132 aa5.45□□□□□ -1.54
ATXN3-228ENST00000554592 CC2D1AQ6P1N0 951 aaPredicted RBP5.45□□□□□ -1.54
ATXN3-228ENST00000554592 CWC27Q6UX04 472 aaKnown RBP5.45□□□□□ -1.54
ATXN3-228ENST00000554592 ABHD15Q6UXT9 468 aa5.45□□□□□ -1.54
ATXN3-228ENST00000554592 CYB5R4Q7L1T6 521 aa5.45□□□□□ -1.54
ATXN3-228ENST00000554592 MAML2Q8IZL2 1156 aaPredicted RBP5.45□□□□□ -1.54
ATXN3-228ENST00000554592 METTL13Q8N6R0 699 aa5.45□□□□□ -1.54
ATXN3-228ENST00000554592 CLRN3Q8NCR9 226 aa5.45□□□□□ -1.54
ATXN3-228ENST00000554592 MAP3K14Q99558 947 aa5.45□□□□□ -1.54
ATXN3-228ENST00000554592 SPZ1Q9BXG8 430 aa5.45□□□□□ -1.54
ATXN3-228ENST00000554592 OSBPL6Q9BZF3 934 aa5.45□□□□□ -1.54
ATXN3-228ENST00000554592 MS4A5Q9H3V2 200 aa5.45□□□□□ -1.54
ATXN3-228ENST00000554592 PCIF1Q9H4Z3 704 aa5.45□□□□□ -1.54
ATXN3-228ENST00000554592 ZNF302Q9NR11 478 aa5.45□□□□□ -1.54
ATXN3-228ENST00000554592 ARHGEF3Q9NR81 526 aa5.45□□□□□ -1.54
ATXN3-228ENST00000554592 SLC2A4RGQ9NR83 387 aa5.45□□□□□ -1.54
ATXN3-228ENST00000554592 CHST12Q9NRB3 414 aa5.45□□□□□ -1.54
ATXN3-228ENST00000554592 RIC8BQ9NVN3 520 aa5.45□□□□□ -1.54
ATXN3-228ENST00000554592 DACT1Q9NYF0 836 aa5.45□□□□□ -1.54
ATXN3-228ENST00000554592 SEC63Q9UGP8 760 aaKnown RBP5.45□□□□□ -1.54
ATXN3-228ENST00000554592 SSX2IPQ9Y2D8 614 aa5.45□□□□□ -1.54
ATXN3-228ENST00000554592 PCDHGA2Q9Y5H1 932 aa5.45□□□□□ -1.54
ATXN3-228ENST00000554592 NCOR2Q9Y618 2525 aa5.45□□□□□ -1.54
ATXN3-228ENST00000554592 CCDC195A0A1B0GUA6 201 aa5.44□□□□□ -1.54
ATXN3-228ENST00000554592 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.44□□□□□ -1.54
ATXN3-228ENST00000554592 KANSL1LA0AUZ9 987 aa5.44□□□□□ -1.54
ATXN3-228ENST00000554592 ANHXE9PGG2 379 aa5.44□□□□□ -1.54
ATXN3-228ENST00000554592 GABRDO14764 452 aa5.44□□□□□ -1.54
ATXN3-228ENST00000554592 N4BP1O75113 896 aaKnown RBP5.44□□□□□ -1.54
ATXN3-228ENST00000554592 ZC3H11AO75152 810 aaKnown RBP eCLIP5.44□□□□□ -1.54
ATXN3-228ENST00000554592 C22orf31O95567 290 aa5.44□□□□□ -1.54
ATXN3-228ENST00000554592 CCNE2O96020 404 aa5.44□□□□□ -1.54
ATXN3-228ENST00000554592 C1RP00736 705 aa5.44□□□□□ -1.54
ATXN3-228ENST00000554592 VTNP04004 478 aa5.44□□□□□ -1.54
ATXN3-228ENST00000554592 CNPP09543 421 aaKnown RBP5.44□□□□□ -1.54
ATXN3-228ENST00000554592 DMDP11532 3685 aa5.44□□□□□ -1.54
ATXN3-228ENST00000554592 LAMP2P13473 410 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms