RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 CORO1CQ9ULV4 474 aaPredicted RBP4.75□□□□□ -1.65
ATXN3-227ENST00000554491 TMCO1Q9UM00 188 aa4.75□□□□□ -1.65
ATXN3-227ENST00000554491 TRAF3IP3Q9Y228 551 aa4.75□□□□□ -1.65
ATXN3-227ENST00000554491 MRPL11Q9Y3B7 192 aaKnown RBP4.75□□□□□ -1.65
ATXN3-227ENST00000554491 DAAM1Q9Y4D1 1078 aa4.75□□□□□ -1.65
ATXN3-227ENST00000554491 ANKRD36CQ5JPF3 1778 aa4.75□□□□□ -1.65
ATXN3-227ENST00000554491 GAKO14976 1311 aa4.74□□□□□ -1.65
ATXN3-227ENST00000554491 ATXN2Q99700 1313 aaKnown RBP4.74□□□□□ -1.65
ATXN3-227ENST00000554491 A0A0A6YYK5 440 aaPredicted RBP4.74□□□□□ -1.65
ATXN3-227ENST00000554491 CCDC162PA2VCL2 907 aa4.74□□□□□ -1.65
ATXN3-227ENST00000554491 LSM1O15116 133 aaKnown RBP4.74□□□□□ -1.65
ATXN3-227ENST00000554491 DAPK3O43293 454 aa4.74□□□□□ -1.65
ATXN3-227ENST00000554491 SNX2O60749 519 aa4.74□□□□□ -1.65
ATXN3-227ENST00000554491 MFAP3LO75121 409 aa4.74□□□□□ -1.65
ATXN3-227ENST00000554491 ZNF254O75437 659 aa4.74□□□□□ -1.65
ATXN3-227ENST00000554491 IPO13O94829 963 aaKnown RBP4.74□□□□□ -1.65
ATXN3-227ENST00000554491 CAVIN2O95810 425 aa4.74□□□□□ -1.65
ATXN3-227ENST00000554491 CFBP00751 764 aa4.74□□□□□ -1.65
ATXN3-227ENST00000554491 CYP17A1P05093 508 aa4.74□□□□□ -1.65
ATXN3-227ENST00000554491 PDGFRBP09619 1106 aa4.74□□□□□ -1.65
ATXN3-227ENST00000554491 PNMA6AP0CW24 399 aaPredicted RBP4.74□□□□□ -1.65
ATXN3-227ENST00000554491 ATP5JP18859 108 aa4.74□□□□□ -1.65
ATXN3-227ENST00000554491 HK1P19367 917 aa4.74□□□□□ -1.65
ATXN3-227ENST00000554491 ZFP36P26651 326 aaKnown RBP4.74□□□□□ -1.65
ATXN3-227ENST00000554491 DDIT3P35638 169 aa4.74□□□□□ -1.65
ATXN3-227ENST00000554491 SCNN1BP51168 640 aa4.74□□□□□ -1.65
ATXN3-227ENST00000554491 FKBP1BP68106 108 aa4.74□□□□□ -1.65
ATXN3-227ENST00000554491 TUBA4AP68366 448 aa4.74□□□□□ -1.65
ATXN3-227ENST00000554491 DR1Q01658 176 aa4.74□□□□□ -1.65
ATXN3-227ENST00000554491 SREBF2Q12772 1141 aa4.74□□□□□ -1.65
ATXN3-227ENST00000554491 SLC39A6Q13433 755 aa4.74□□□□□ -1.65
ATXN3-227ENST00000554491 STIM1Q13586 685 aa4.74□□□□□ -1.65
ATXN3-227ENST00000554491 DPYSQ14117 519 aa4.74□□□□□ -1.65
ATXN3-227ENST00000554491 SPIDRQ14159 915 aa4.74□□□□□ -1.65
ATXN3-227ENST00000554491 NAA25Q14CX7 972 aa4.74□□□□□ -1.65
ATXN3-227ENST00000554491 CCDC153Q494R4 210 aa4.74□□□□□ -1.65
ATXN3-227ENST00000554491 CRY2Q49AN0 593 aa4.74□□□□□ -1.65
ATXN3-227ENST00000554491 C2orf27AQ580R0 203 aa4.74□□□□□ -1.65
ATXN3-227ENST00000554491 FAM133BQ5BKY9 247 aaKnown RBP4.74□□□□□ -1.65
ATXN3-227ENST00000554491 SPATA1Q5VX52 437 aa4.74□□□□□ -1.65
ATXN3-227ENST00000554491 ESRP1Q6NXG1 681 aaKnown RBP4.74□□□□□ -1.65
ATXN3-227ENST00000554491 ZNF449Q6P9G9 518 aa4.74□□□□□ -1.65
ATXN3-227ENST00000554491 UNC5DQ6UXZ4 953 aa4.74□□□□□ -1.65
ATXN3-227ENST00000554491 Q7L0L9 218 aa4.74□□□□□ -1.65
ATXN3-227ENST00000554491 DGLUCYQ7Z3D6 616 aa4.74□□□□□ -1.65
ATXN3-227ENST00000554491 CXorf67Q86X51 503 aaPredicted RBP4.74□□□□□ -1.65
ATXN3-227ENST00000554491 SNX32Q86XE0 403 aa4.74□□□□□ -1.65
ATXN3-227ENST00000554491 CMTM4Q8IZR5 234 aa4.74□□□□□ -1.65
ATXN3-227ENST00000554491 DEFB123Q8N688 67 aa4.74□□□□□ -1.65
ATXN3-227ENST00000554491 GDAP1Q8TB36 358 aa4.74□□□□□ -1.65
ATXN3-227ENST00000554491 CPT1CQ8TCG5 803 aa4.74□□□□□ -1.65
ATXN3-227ENST00000554491 ST8SIA2Q92186 375 aa4.74□□□□□ -1.65
ATXN3-227ENST00000554491 CDKL2Q92772 493 aa4.74□□□□□ -1.65
ATXN3-227ENST00000554491 CDCA5Q96FF9 252 aa4.74□□□□□ -1.65
ATXN3-227ENST00000554491 C8orf48Q96LL4 319 aa4.74□□□□□ -1.65
ATXN3-227ENST00000554491 UQCC2Q9BRT2 126 aa4.74□□□□□ -1.65
ATXN3-227ENST00000554491 SOX7Q9BT81 388 aa4.74□□□□□ -1.65
ATXN3-227ENST00000554491 CENPOQ9BU64 300 aa4.74□□□□□ -1.65
ATXN3-227ENST00000554491 RTFDC1Q9BY42 306 aaPredicted RBP4.74□□□□□ -1.65
ATXN3-227ENST00000554491 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.74□□□□□ -1.65
ATXN3-227ENST00000554491 NSRP1Q9H0G5 558 aaKnown RBP4.74□□□□□ -1.65
ATXN3-227ENST00000554491 R3HDMLQ9H3Y0 253 aa4.74□□□□□ -1.65
ATXN3-227ENST00000554491 MTG2Q9H4K7 406 aa4.74□□□□□ -1.65
ATXN3-227ENST00000554491 CLK4Q9HAZ1 481 aaKnown RBP4.74□□□□□ -1.65
ATXN3-227ENST00000554491 PAPOLBQ9NRJ5 636 aaKnown RBP4.74□□□□□ -1.65
ATXN3-227ENST00000554491 PDRG1Q9NUG6 133 aa4.74□□□□□ -1.65
ATXN3-227ENST00000554491 FKBP14Q9NWM8 211 aa4.74□□□□□ -1.65
ATXN3-227ENST00000554491 STAP2Q9UGK3 403 aa4.74□□□□□ -1.65
ATXN3-227ENST00000554491 EVLQ9UI08 416 aaPredicted RBP4.74□□□□□ -1.65
ATXN3-227ENST00000554491 MTUS1Q9ULD2 1270 aa4.74□□□□□ -1.65
ATXN3-227ENST00000554491 SORCS3Q9UPU3 1222 aa4.74□□□□□ -1.65
ATXN3-227ENST00000554491 SATB2Q9UPW6 733 aa4.74□□□□□ -1.65
ATXN3-227ENST00000554491 TNPO3Q9Y5L0 923 aaKnown RBP4.74□□□□□ -1.65
ATXN3-227ENST00000554491 OTOFQ9HC10 1997 aa4.74□□□□□ -1.65
ATXN3-227ENST00000554491 GRID2IPA4D2P6 1211 aa4.73□□□□□ -1.65
ATXN3-227ENST00000554491 TMEM247A6NEH6 219 aa4.73□□□□□ -1.65
ATXN3-227ENST00000554491 H7C1D1 291 aa4.73□□□□□ -1.65
ATXN3-227ENST00000554491 WDR46O15213 610 aaKnown RBP4.73□□□□□ -1.65
ATXN3-227ENST00000554491 DNAJC8O75937 253 aaPredicted RBP4.73□□□□□ -1.65
ATXN3-227ENST00000554491 TMCC1O94876 653 aa4.73□□□□□ -1.65
ATXN3-227ENST00000554491 STARD3NLO95772 234 aa4.73□□□□□ -1.65
ATXN3-227ENST00000554491 NUDT3O95989 172 aa4.73□□□□□ -1.65
ATXN3-227ENST00000554491 ITGB1P05556 798 aa4.73□□□□□ -1.65
ATXN3-227ENST00000554491 S100A6P06703 90 aa4.73□□□□□ -1.65
ATXN3-227ENST00000554491 SFTPCP11686 197 aa4.73□□□□□ -1.65
ATXN3-227ENST00000554491 SLC9A1P19634 815 aa4.73□□□□□ -1.65
ATXN3-227ENST00000554491 S100A1P23297 94 aa4.73□□□□□ -1.65
ATXN3-227ENST00000554491 OAS2P29728 719 aaKnown RBP4.73□□□□□ -1.65
ATXN3-227ENST00000554491 PRKAR2BP31323 418 aa4.73□□□□□ -1.65
ATXN3-227ENST00000554491 SLC8A1P32418 973 aa4.73□□□□□ -1.65
ATXN3-227ENST00000554491 HOXD12P35452 270 aa4.73□□□□□ -1.65
ATXN3-227ENST00000554491 GNL1P36915 607 aaPredicted RBP4.73□□□□□ -1.65
ATXN3-227ENST00000554491 IL6STP40189 918 aaPredicted RBP4.73□□□□□ -1.65
ATXN3-227ENST00000554491 IL12RB1P42701 662 aa4.73□□□□□ -1.65
ATXN3-227ENST00000554491 TM4SF4P48230 202 aa4.73□□□□□ -1.65
ATXN3-227ENST00000554491 MXI1P50539 228 aa4.73□□□□□ -1.65
ATXN3-227ENST00000554491 NPEPPSP55786 919 aa4.73□□□□□ -1.65
ATXN3-227ENST00000554491 BCAR1P56945 870 aa4.73□□□□□ -1.65
ATXN3-227ENST00000554491 AP2B1P63010 937 aa4.73□□□□□ -1.65
ATXN3-227ENST00000554491 GUCY1B3Q02153 619 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms