RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 RHBDF2Q6PJF5 856 aa13.7□□□□□ -0.22
SHMT2-211ENST00000554310 TSSK4Q6SA08 328 aa13.7□□□□□ -0.22
SHMT2-211ENST00000554310 BHLHA9Q7RTU4 235 aa13.7□□□□□ -0.22
SHMT2-211ENST00000554310 ZSCAN30Q86W11 494 aa13.7□□□□□ -0.22
SHMT2-211ENST00000554310 MIB1Q86YT6 1006 aa13.7□□□□□ -0.22
SHMT2-211ENST00000554310 ENOX1Q8TC92 643 aaKnown RBP13.7□□□□□ -0.22
SHMT2-211ENST00000554310 SLC35F5Q8WV83 523 aa13.7□□□□□ -0.22
SHMT2-211ENST00000554310 ATRIPQ8WXE1 791 aa13.7□□□□□ -0.22
SHMT2-211ENST00000554310 ACDQ96AP0 544 aa13.7□□□□□ -0.22
SHMT2-211ENST00000554310 TUBGCP2Q9BSJ2 902 aa13.7□□□□□ -0.22
SHMT2-211ENST00000554310 NDST4Q9H3R1 872 aa13.7□□□□□ -0.22
SHMT2-211ENST00000554310 FBRSL1Q9HCM7 1045 aaKnown RBP13.7□□□□□ -0.22
SHMT2-211ENST00000554310 OLA1Q9NTK5 396 aaKnown RBP13.7□□□□□ -0.22
SHMT2-211ENST00000554310 RASAL2Q9UJF2 1139 aa13.7□□□□□ -0.22
SHMT2-211ENST00000554310 NUDT5Q9UKK9 219 aa13.7□□□□□ -0.22
SHMT2-211ENST00000554310 STRIP2Q9ULQ0 834 aa13.7□□□□□ -0.22
SHMT2-211ENST00000554310 NFE2L3Q9Y4A8 694 aa13.7□□□□□ -0.22
SHMT2-211ENST00000554310 USP34Q70CQ2 3546 aa13.7□□□□□ -0.22
SHMT2-211ENST00000554310 WDR87Q6ZQQ6 2873 aa13.69□□□□□ -0.22
SHMT2-211ENST00000554310 MDM4O15151 490 aa13.69□□□□□ -0.22
SHMT2-211ENST00000554310 MED7O43513 233 aa13.69□□□□□ -0.22
SHMT2-211ENST00000554310 LILRB5O75023 590 aa13.69□□□□□ -0.22
SHMT2-211ENST00000554310 GNA15P30679 374 aa13.69□□□□□ -0.22
SHMT2-211ENST00000554310 HOXA6P31267 233 aa13.69□□□□□ -0.22
SHMT2-211ENST00000554310 COG7P83436 770 aa13.69□□□□□ -0.22
SHMT2-211ENST00000554310 GAD2Q05329 585 aa13.69□□□□□ -0.22
SHMT2-211ENST00000554310 EFEMP1Q12805 493 aa13.69□□□□□ -0.22
SHMT2-211ENST00000554310 MIIPQ5JXC2 388 aa13.69□□□□□ -0.22
SHMT2-211ENST00000554310 LY6G5CQ5SRR4 150 aa13.69□□□□□ -0.22
SHMT2-211ENST00000554310 BTBD8Q5XKL5 378 aa13.69□□□□□ -0.22
SHMT2-211ENST00000554310 Q6ZNB5 142 aa13.69□□□□□ -0.22
SHMT2-211ENST00000554310 ASCL5Q7RTU5 278 aa13.69□□□□□ -0.22
SHMT2-211ENST00000554310 IRGQQ8WZA9 623 aa13.69□□□□□ -0.22
SHMT2-211ENST00000554310 SHC3Q92529 594 aa13.69□□□□□ -0.22
SHMT2-211ENST00000554310 WBP2Q969T9 261 aa13.69□□□□□ -0.22
SHMT2-211ENST00000554310 HSFY1Q96LI6 401 aa13.69□□□□□ -0.22
SHMT2-211ENST00000554310 RRAGDQ9NQL2 400 aaPredicted RBP13.69□□□□□ -0.22
SHMT2-211ENST00000554310 SPHK2Q9NRA0 654 aa13.69□□□□□ -0.22
SHMT2-211ENST00000554310 SAMSN1Q9NSI8 373 aaKnown RBP13.69□□□□□ -0.22
SHMT2-211ENST00000554310 MARCH2Q9P0N8 246 aa13.69□□□□□ -0.22
SHMT2-211ENST00000554310 ZNF510Q9Y2H8 683 aa13.69□□□□□ -0.22
SHMT2-211ENST00000554310 ATG2BQ96BY7 2078 aa13.68□□□□□ -0.22
SHMT2-211ENST00000554310 K7ESF4 209 aa13.68□□□□□ -0.22
SHMT2-211ENST00000554310 SART1O43290 800 aaKnown RBP13.68□□□□□ -0.22
SHMT2-211ENST00000554310 STC2O76061 302 aa13.68□□□□□ -0.22
SHMT2-211ENST00000554310 FBXO21O94952 628 aa13.68□□□□□ -0.22
SHMT2-211ENST00000554310 LMNAP02545 664 aaKnown RBP13.68□□□□□ -0.22
SHMT2-211ENST00000554310 RGS7P49802 495 aa13.68□□□□□ -0.22
SHMT2-211ENST00000554310 DAOAP59103 153 aa13.68□□□□□ -0.22
SHMT2-211ENST00000554310 IQCB1Q15051 598 aa13.68□□□□□ -0.22
SHMT2-211ENST00000554310 ARHGAP44Q17R89 818 aa13.68□□□□□ -0.22
SHMT2-211ENST00000554310 PREPLQ4J6C6 727 aaPredicted RBP13.68□□□□□ -0.22
SHMT2-211ENST00000554310 HSP90AA4PQ58FG1 418 aa13.68□□□□□ -0.22
SHMT2-211ENST00000554310 TCP11X2Q5H9J9 407 aa13.68□□□□□ -0.22
SHMT2-211ENST00000554310 PMF1Q6P1K2 205 aa13.68□□□□□ -0.22
SHMT2-211ENST00000554310 PKN3Q6P5Z2 889 aa13.68□□□□□ -0.22
SHMT2-211ENST00000554310 GJB7Q6PEY0 223 aa13.68□□□□□ -0.22
SHMT2-211ENST00000554310 LUZP1Q86V48 1076 aa13.68□□□□□ -0.22
SHMT2-211ENST00000554310 ETFBKMTQ8IXQ9 262 aa13.68□□□□□ -0.22
SHMT2-211ENST00000554310 EZH1Q92800 747 aaPredicted RBP13.68□□□□□ -0.22
SHMT2-211ENST00000554310 PLD4Q96BZ4 506 aa13.68□□□□□ -0.22
SHMT2-211ENST00000554310 PNKPQ96T60 521 aa13.68□□□□□ -0.22
SHMT2-211ENST00000554310 BPIFA3Q9BQP9 254 aa13.68□□□□□ -0.22
SHMT2-211ENST00000554310 DCLK3Q9C098 648 aa13.68□□□□□ -0.22
SHMT2-211ENST00000554310 NAT10Q9H0A0 1025 aaKnown RBP13.68□□□□□ -0.22
SHMT2-211ENST00000554310 EPC1Q9H2F5 836 aa13.68□□□□□ -0.22
SHMT2-211ENST00000554310 SIX2Q9NPC8 291 aa13.68□□□□□ -0.22
SHMT2-211ENST00000554310 MARK1Q9P0L2 795 aa13.68□□□□□ -0.22
SHMT2-211ENST00000554310 YJEFN3A6XGL0 299 aa13.67□□□□□ -0.22
SHMT2-211ENST00000554310 BECN2A8MW95 431 aa13.67□□□□□ -0.22
SHMT2-211ENST00000554310 E7ENQ6 273 aa13.67□□□□□ -0.22
SHMT2-211ENST00000554310 THAP12O43422 761 aa13.67□□□□□ -0.22
SHMT2-211ENST00000554310 KAT7O95251 611 aa13.67□□□□□ -0.22
SHMT2-211ENST00000554310 CALCAP01258 141 aa13.67□□□□□ -0.22
SHMT2-211ENST00000554310 APODP05090 189 aa13.67□□□□□ -0.22
SHMT2-211ENST00000554310 LCP1P13796 627 aa13.67□□□□□ -0.22
SHMT2-211ENST00000554310 CLCN1P35523 988 aa13.67□□□□□ -0.22
SHMT2-211ENST00000554310 GPD2P43304 727 aa13.67□□□□□ -0.22
SHMT2-211ENST00000554310 ACADSBP45954 432 aa13.67□□□□□ -0.22
SHMT2-211ENST00000554310 RPL34P49207 117 aaKnown RBP13.67□□□□□ -0.22
SHMT2-211ENST00000554310 APBA1Q02410 837 aa13.67□□□□□ -0.22
SHMT2-211ENST00000554310 ANO4Q32M45 955 aa13.67□□□□□ -0.22
SHMT2-211ENST00000554310 CDKAL1Q5VV42 579 aa13.67□□□□□ -0.22
SHMT2-211ENST00000554310 BSPRYQ5W0U4 402 aa13.67□□□□□ -0.22
SHMT2-211ENST00000554310 C11orf57Q6ZUT1 292 aaPredicted RBP13.67□□□□□ -0.22
SHMT2-211ENST00000554310 C12orf40Q86WS4 652 aa13.67□□□□□ -0.22
SHMT2-211ENST00000554310 RPLP0P6Q8NHW5 317 aa13.67□□□□□ -0.22
SHMT2-211ENST00000554310 STK32AQ8WU08 396 aa13.67□□□□□ -0.22
SHMT2-211ENST00000554310 RNF139Q8WU17 664 aa13.67□□□□□ -0.22
SHMT2-211ENST00000554310 ZNF606Q8WXB4 792 aa13.67□□□□□ -0.22
SHMT2-211ENST00000554310 GOLGA1Q92805 767 aa13.67□□□□□ -0.22
SHMT2-211ENST00000554310 ARHGEF4Q9NR80 690 aa13.67□□□□□ -0.22
SHMT2-211ENST00000554310 ABCC13Q9NSE7 274 aa13.67□□□□□ -0.22
SHMT2-211ENST00000554310 C2orf42Q9NWW7 574 aa13.67□□□□□ -0.22
SHMT2-211ENST00000554310 SLC8A2Q9UPR5 921 aa13.67□□□□□ -0.22
SHMT2-211ENST00000554310 HBS1LQ9Y450 684 aaKnown RBP13.67□□□□□ -0.22
SHMT2-211ENST00000554310 CCDC163A0A0D9SF12 145 aa13.66□□□□□ -0.22
SHMT2-211ENST00000554310 PES1O00541 588 aaKnown RBP13.66□□□□□ -0.22
SHMT2-211ENST00000554310 AP5Z1O43299 807 aa13.66□□□□□ -0.22
SHMT2-211ENST00000554310 CACNG3O60359 315 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms