RNA–Protein interactions for RNA: ENST00000554302.1

RCCD1-202, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-202ENST00000554302 C10orf76Q5T2E6 689 aa23.02■■□□□ 1.28
RCCD1-202ENST00000554302 N4BP2L1Q5TBK1 243 aaPredicted RBP23.02■■□□□ 1.28
RCCD1-202ENST00000554302 CYP2U1Q7Z449 544 aa23.02■■□□□ 1.28
RCCD1-202ENST00000554302 MIB1Q86YT6 1006 aa23.02■■□□□ 1.28
RCCD1-202ENST00000554302 TTC39CQ8N584 583 aa23.02■■□□□ 1.28
RCCD1-202ENST00000554302 FRMD1Q8N878 549 aa23.02■■□□□ 1.28
RCCD1-202ENST00000554302 CCDC150Q8NCX0 1101 aa23.02■■□□□ 1.28
RCCD1-202ENST00000554302 FAM124BQ9H5Z6 455 aaPredicted RBP23.02■■□□□ 1.28
RCCD1-202ENST00000554302 MMRN2Q9H8L6 949 aa23.02■■□□□ 1.28
RCCD1-202ENST00000554302 CD248Q9HCU0 757 aa23.02■■□□□ 1.28
RCCD1-202ENST00000554302 CLIC5Q9NZA1 410 aa23.02■■□□□ 1.28
RCCD1-202ENST00000554302 WDR35Q9P2L0 1181 aa23.02■■□□□ 1.28
RCCD1-202ENST00000554302 TNRC6BQ9UPQ9 1833 aaKnown RBP23.02■■□□□ 1.28
RCCD1-202ENST00000554302 MYO18AQ92614 2054 aaKnown RBP23.01■■□□□ 1.27
RCCD1-202ENST00000554302 TCRBV21S2A2A0A5A6 115 aa23.01■■□□□ 1.27
RCCD1-202ENST00000554302 KHNYNO15037 678 aaKnown RBP23.01■■□□□ 1.27
RCCD1-202ENST00000554302 KCNK5O95279 499 aa23.01■■□□□ 1.27
RCCD1-202ENST00000554302 TYRP14679 529 aa23.01■■□□□ 1.27
RCCD1-202ENST00000554302 GRAMD4Q6IC98 578 aa23.01■■□□□ 1.27
RCCD1-202ENST00000554302 SMYD4Q8IYR2 804 aaPredicted RBP23.01■■□□□ 1.27
RCCD1-202ENST00000554302 FBXL13Q8NEE6 735 aa23.01■■□□□ 1.27
RCCD1-202ENST00000554302 HMGB4Q8WW32 186 aa23.01■■□□□ 1.27
RCCD1-202ENST00000554302 SPACA7Q96KW9 195 aa23.01■■□□□ 1.27
RCCD1-202ENST00000554302 XPO6Q96QU8 1125 aaKnown RBP23.01■■□□□ 1.27
RCCD1-202ENST00000554302 BBS2Q9BXC9 721 aa23.01■■□□□ 1.27
RCCD1-202ENST00000554302 UBXN6Q9BZV1 441 aa23.01■■□□□ 1.27
RCCD1-202ENST00000554302 DNAI2Q9GZS0 605 aa23.01■■□□□ 1.27
RCCD1-202ENST00000554302 DNAJC17Q9NVM6 304 aaKnown RBP23.01■■□□□ 1.27
RCCD1-202ENST00000554302 RAB20Q9NX57 234 aa23.01■■□□□ 1.27
RCCD1-202ENST00000554302 BCCIPQ9P287 314 aaKnown RBP eCLIP23.01■■□□□ 1.27
RCCD1-202ENST00000554302 EVLQ9UI08 416 aaPredicted RBP23.01■■□□□ 1.27
RCCD1-202ENST00000554302 NUDT5Q9UKK9 219 aa23.01■■□□□ 1.27
RCCD1-202ENST00000554302 A0A1W2PQF6 199 aa23■■□□□ 1.27
RCCD1-202ENST00000554302 C4orf47A7E2U8 309 aa23■■□□□ 1.27
RCCD1-202ENST00000554302 PATE3B3GLJ2 98 aa23■■□□□ 1.27
RCCD1-202ENST00000554302 NEDD8-MDP1E9PL57 170 aa23■■□□□ 1.27
RCCD1-202ENST00000554302 MDM4O15151 490 aa23■■□□□ 1.27
RCCD1-202ENST00000554302 CISD3P0C7P0 127 aa23■■□□□ 1.27
RCCD1-202ENST00000554302 NTSR1P30989 418 aa23■■□□□ 1.27
RCCD1-202ENST00000554302 DHPSP49366 369 aaPredicted RBP23■■□□□ 1.27
RCCD1-202ENST00000554302 MXI1P50539 228 aa23■■□□□ 1.27
RCCD1-202ENST00000554302 BYSLQ13895 437 aaKnown RBP23■■□□□ 1.27
RCCD1-202ENST00000554302 COBLL1Q53SF7 1204 aa23■■□□□ 1.27
RCCD1-202ENST00000554302 LPCAT2Q7L5N7 544 aa23■■□□□ 1.27
RCCD1-202ENST00000554302 SLC4A11Q8NBS3 891 aa23■■□□□ 1.27
RCCD1-202ENST00000554302 EEF2KMTQ96G04 330 aa23■■□□□ 1.27
RCCD1-202ENST00000554302 P2RY11Q96G91 374 aa23■■□□□ 1.27
RCCD1-202ENST00000554302 GDPD2Q9HCC8 539 aa23■■□□□ 1.27
RCCD1-202ENST00000554302 CISHQ9NSE2 258 aa23■■□□□ 1.27
RCCD1-202ENST00000554302 NAGPAQ9UK23 515 aa23■■□□□ 1.27
RCCD1-202ENST00000554302 FBXO10Q9UK96 956 aa23■■□□□ 1.27
RCCD1-202ENST00000554302 PRRT4C9JH25 899 aa22.99■■□□□ 1.27
RCCD1-202ENST00000554302 CDX4O14627 284 aaPredicted RBP22.99■■□□□ 1.27
RCCD1-202ENST00000554302 CETN3O15182 167 aa22.99■■□□□ 1.27
RCCD1-202ENST00000554302 STC2O76061 302 aa22.99■■□□□ 1.27
RCCD1-202ENST00000554302 GABRG2P18507 467 aa22.99■■□□□ 1.27
RCCD1-202ENST00000554302 RAD23BP54727 409 aa22.99■■□□□ 1.27
RCCD1-202ENST00000554302 ZNF394Q53GI3 561 aa22.99■■□□□ 1.27
RCCD1-202ENST00000554302 RAB41Q5JT25 222 aa22.99■■□□□ 1.27
RCCD1-202ENST00000554302 C10orf120Q5SQS8 335 aa22.99■■□□□ 1.27
RCCD1-202ENST00000554302 ARHGAP17Q68EM7 881 aa22.99■■□□□ 1.27
RCCD1-202ENST00000554302 TPGS1Q6ZTW0 290 aa22.99■■□□□ 1.27
RCCD1-202ENST00000554302 TADA2BQ86TJ2 420 aa22.99■■□□□ 1.27
RCCD1-202ENST00000554302 ZC3H3Q8IXZ2 948 aaKnown RBP22.99■■□□□ 1.27
RCCD1-202ENST00000554302 FMR1NBQ8N0W7 255 aaPredicted RBP22.99■■□□□ 1.27
RCCD1-202ENST00000554302 TMEM176AQ96HP8 235 aa22.99■■□□□ 1.27
RCCD1-202ENST00000554302 HEXIM2Q96MH2 286 aaKnown RBP22.99■■□□□ 1.27
RCCD1-202ENST00000554302 COQ4Q9Y3A0 265 aa22.99■■□□□ 1.27
RCCD1-202ENST00000554302 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa22.98■■□□□ 1.27
RCCD1-202ENST00000554302 STX10O60499 249 aa22.98■■□□□ 1.27
RCCD1-202ENST00000554302 KLKB1P03952 638 aa22.98■■□□□ 1.27
RCCD1-202ENST00000554302 HOXB2P14652 356 aa22.98■■□□□ 1.27
RCCD1-202ENST00000554302 PTGER3P43115 390 aa22.98■■□□□ 1.27
RCCD1-202ENST00000554302 IRX4P78413 519 aa22.98■■□□□ 1.27
RCCD1-202ENST00000554302 SHC2P98077 582 aa22.98■■□□□ 1.27
RCCD1-202ENST00000554302 PNOCQ13519 176 aa22.98■■□□□ 1.27
RCCD1-202ENST00000554302 PEAR1Q5VY43 1037 aaPredicted RBP22.98■■□□□ 1.27
RCCD1-202ENST00000554302 EGFLAMQ63HQ2 1017 aa22.98■■□□□ 1.27
RCCD1-202ENST00000554302 TOGARAM2Q6ZUX3 1019 aa22.98■■□□□ 1.27
RCCD1-202ENST00000554302 TMEFF1Q8IYR6 380 aa22.98■■□□□ 1.27
RCCD1-202ENST00000554302 PIGKQ92643 395 aa22.98■■□□□ 1.27
RCCD1-202ENST00000554302 CDK5RAP1Q96SZ6 601 aaKnown RBP22.98■■□□□ 1.27
RCCD1-202ENST00000554302 ACOX2Q99424 681 aa22.98■■□□□ 1.27
RCCD1-202ENST00000554302 ARID3AQ99856 593 aa22.98■■□□□ 1.27
RCCD1-202ENST00000554302 GABRG3Q99928 467 aa22.98■■□□□ 1.27
RCCD1-202ENST00000554302 TMEM74BQ9NUR3 256 aa22.98■■□□□ 1.27
RCCD1-202ENST00000554302 EPB41P11171 864 aaKnown RBP22.97■■□□□ 1.27
RCCD1-202ENST00000554302 RALAP11233 206 aa22.97■■□□□ 1.27
RCCD1-202ENST00000554302 PRCPP42785 496 aa22.97■■□□□ 1.27
RCCD1-202ENST00000554302 DAB2IPQ5VWQ8 1189 aa22.97■■□□□ 1.27
RCCD1-202ENST00000554302 SYT12Q8IV01 421 aa22.97■■□□□ 1.27
RCCD1-202ENST00000554302 PGBD3Q8N328 593 aa22.97■■□□□ 1.27
RCCD1-202ENST00000554302 TATDN2Q93075 761 aa22.97■■□□□ 1.27
RCCD1-202ENST00000554302 CCDC34Q96HJ3 373 aa22.97■■□□□ 1.27
RCCD1-202ENST00000554302 TMEM9BQ9NQ34 198 aa22.97■■□□□ 1.27
RCCD1-202ENST00000554302 RMND1Q9NWS8 449 aa22.97■■□□□ 1.27
RCCD1-202ENST00000554302 ANGPTL2Q9UKU9 493 aa22.97■■□□□ 1.27
RCCD1-202ENST00000554302 ZNF510Q9Y2H8 683 aa22.97■■□□□ 1.27
RCCD1-202ENST00000554302 MAP3K13O43283 966 aa22.96■■□□□ 1.27
RCCD1-202ENST00000554302 PENKP01210 267 aaPredicted RBP22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms