RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 SLC39A2Q9NP94 309 aa6.29□□□□□ -1.4
VPS33B-203ENST00000554264 KLC4Q9NSK0 619 aa6.29□□□□□ -1.4
VPS33B-203ENST00000554264 BLOC1S4Q9NUP1 217 aa6.29□□□□□ -1.4
VPS33B-203ENST00000554264 PANK4Q9NVE7 773 aa6.29□□□□□ -1.4
VPS33B-203ENST00000554264 SLC12A6Q9UHW9 1150 aa6.29□□□□□ -1.4
VPS33B-203ENST00000554264 TRAF3IP3Q9Y228 551 aa6.29□□□□□ -1.4
VPS33B-203ENST00000554264 Q9Y3F1 56 aa6.29□□□□□ -1.4
VPS33B-203ENST00000554264 RIPK3Q9Y572 518 aa6.29□□□□□ -1.4
VPS33B-203ENST00000554264 DUSP10Q9Y6W6 482 aa6.29□□□□□ -1.4
VPS33B-203ENST00000554264 NCOR1O75376 2440 aa6.29□□□□□ -1.4
VPS33B-203ENST00000554264 NCANO14594 1321 aa6.28□□□□□ -1.4
VPS33B-203ENST00000554264 UMODL1Q5DID0 1318 aa6.28□□□□□ -1.4
VPS33B-203ENST00000554264 hCG_1642624A0A1W2PR95 340 aa6.28□□□□□ -1.4
VPS33B-203ENST00000554264 PI4K2BG5E9Z4 385 aa6.28□□□□□ -1.4
VPS33B-203ENST00000554264 KRIT1O00522 736 aa6.28□□□□□ -1.4
VPS33B-203ENST00000554264 NDC80O14777 642 aa6.28□□□□□ -1.4
VPS33B-203ENST00000554264 PPFIA2O75334 1257 aa6.28□□□□□ -1.4
VPS33B-203ENST00000554264 AGTP01019 485 aa6.28□□□□□ -1.4
VPS33B-203ENST00000554264 KRT14P02533 472 aa6.28□□□□□ -1.4
VPS33B-203ENST00000554264 AFPP02771 609 aaKnown RBP6.28□□□□□ -1.4
VPS33B-203ENST00000554264 CA3P07451 260 aa6.28□□□□□ -1.4
VPS33B-203ENST00000554264 PLEKP08567 350 aaPredicted RBP6.28□□□□□ -1.4
VPS33B-203ENST00000554264 H2AFZP0C0S5 128 aa6.28□□□□□ -1.4
VPS33B-203ENST00000554264 TACR1P25103 407 aa6.28□□□□□ -1.4
VPS33B-203ENST00000554264 MAN1A1P33908 653 aa6.28□□□□□ -1.4
VPS33B-203ENST00000554264 RFC2P35250 354 aa6.28□□□□□ -1.4
VPS33B-203ENST00000554264 HSD17B3P37058 310 aa6.28□□□□□ -1.4
VPS33B-203ENST00000554264 CARSP49589 748 aaKnown RBP6.28□□□□□ -1.4
VPS33B-203ENST00000554264 ZNF131P52739 623 aa6.28□□□□□ -1.4
VPS33B-203ENST00000554264 OAZ1P54368 228 aa6.28□□□□□ -1.4
VPS33B-203ENST00000554264 SLC8A3P57103 927 aa6.28□□□□□ -1.4
VPS33B-203ENST00000554264 ERVFRD-1P60508 538 aa6.28□□□□□ -1.4
VPS33B-203ENST00000554264 POLR2FP61218 127 aaKnown RBP6.28□□□□□ -1.4
VPS33B-203ENST00000554264 BEX3Q00994 111 aa6.28□□□□□ -1.4
VPS33B-203ENST00000554264 RAPGEF1Q13905 1077 aa6.28□□□□□ -1.4
VPS33B-203ENST00000554264 MYBPC2Q14324 1141 aa6.28□□□□□ -1.4
VPS33B-203ENST00000554264 CRYMQ14894 314 aa6.28□□□□□ -1.4
VPS33B-203ENST00000554264 FSCN1Q16658 493 aaKnown RBP6.28□□□□□ -1.4
VPS33B-203ENST00000554264 BMT2Q1RMZ1 405 aa6.28□□□□□ -1.4
VPS33B-203ENST00000554264 ODF2Q5BJF6 829 aa6.28□□□□□ -1.4
VPS33B-203ENST00000554264 SLC35F1Q5T1Q4 408 aa6.28□□□□□ -1.4
VPS33B-203ENST00000554264 RNF187Q5TA31 235 aaPredicted RBP6.28□□□□□ -1.4
VPS33B-203ENST00000554264 FOXB2Q5VYV0 432 aa6.28□□□□□ -1.4
VPS33B-203ENST00000554264 CXCL17Q6UXB2 119 aa6.28□□□□□ -1.4
VPS33B-203ENST00000554264 H2AFVQ71UI9 128 aa6.28□□□□□ -1.4
VPS33B-203ENST00000554264 PEX26Q7Z412 305 aa6.28□□□□□ -1.4
VPS33B-203ENST00000554264 ZNF605Q86T29 641 aa6.28□□□□□ -1.4
VPS33B-203ENST00000554264 KSR1Q8IVT5 923 aa6.28□□□□□ -1.4
VPS33B-203ENST00000554264 RHOT2Q8IXI1 618 aa6.28□□□□□ -1.4
VPS33B-203ENST00000554264 GSPT2Q8IYD1 628 aaKnown RBP6.28□□□□□ -1.4
VPS33B-203ENST00000554264 CCDC13Q8IYE1 715 aa6.28□□□□□ -1.4
VPS33B-203ENST00000554264 CPXCR1Q8N123 301 aa6.28□□□□□ -1.4
VPS33B-203ENST00000554264 HDAC7Q8WUI4 952 aa6.28□□□□□ -1.4
VPS33B-203ENST00000554264 TBC1D5Q92609 795 aa6.28□□□□□ -1.4
VPS33B-203ENST00000554264 KAT2BQ92831 832 aa6.28□□□□□ -1.4
VPS33B-203ENST00000554264 CHMP6Q96FZ7 201 aa6.28□□□□□ -1.4
VPS33B-203ENST00000554264 GDAP1L1Q96MZ0 367 aa6.28□□□□□ -1.4
VPS33B-203ENST00000554264 IER2Q9BTL4 223 aa6.28□□□□□ -1.4
VPS33B-203ENST00000554264 LSM14BQ9BX40 385 aaKnown RBP6.28□□□□□ -1.4
VPS33B-203ENST00000554264 KATNBL1Q9H079 304 aa6.28□□□□□ -1.4
VPS33B-203ENST00000554264 TRPV6Q9H1D0 765 aa6.28□□□□□ -1.4
VPS33B-203ENST00000554264 WNT8AQ9H1J5 351 aa6.28□□□□□ -1.4
VPS33B-203ENST00000554264 GANQ9H2C0 597 aa6.28□□□□□ -1.4
VPS33B-203ENST00000554264 CXorf56Q9H5V9 222 aa6.28□□□□□ -1.4
VPS33B-203ENST00000554264 ATP6V0A4Q9HBG4 840 aa6.28□□□□□ -1.4
VPS33B-203ENST00000554264 SLC38A10Q9HBR0 1119 aa6.28□□□□□ -1.4
VPS33B-203ENST00000554264 TNFRSF12AQ9NP84 129 aa6.28□□□□□ -1.4
VPS33B-203ENST00000554264 IL17RBQ9NRM6 502 aa6.28□□□□□ -1.4
VPS33B-203ENST00000554264 SNTG2Q9NY99 539 aa6.28□□□□□ -1.4
VPS33B-203ENST00000554264 DONSONQ9NYP3 566 aa6.28□□□□□ -1.4
VPS33B-203ENST00000554264 NYAP2Q9P242 653 aa6.28□□□□□ -1.4
VPS33B-203ENST00000554264 KLHL14Q9P2G3 628 aa6.28□□□□□ -1.4
VPS33B-203ENST00000554264 GULP1Q9UBP9 304 aa6.28□□□□□ -1.4
VPS33B-203ENST00000554264 MTRF1LQ9UGC7 380 aaKnown RBP6.28□□□□□ -1.4
VPS33B-203ENST00000554264 ARMCX3Q9UH62 379 aaPredicted RBP6.28□□□□□ -1.4
VPS33B-203ENST00000554264 AMFRQ9UKV5 643 aa6.28□□□□□ -1.4
VPS33B-203ENST00000554264 STX8Q9UNK0 236 aa6.28□□□□□ -1.4
VPS33B-203ENST00000554264 ZNFX1Q9P2E3 1918 aaKnown RBP6.28□□□□□ -1.4
VPS33B-203ENST00000554264 PARP14Q460N5 1801 aa6.27□□□□□ -1.41
VPS33B-203ENST00000554264 GREB1LQ9C091 1923 aaPredicted RBP6.27□□□□□ -1.41
VPS33B-203ENST00000554264 CYP3A7-CYP3A51PA0A087WV96 503 aa6.27□□□□□ -1.41
VPS33B-203ENST00000554264 CYP2D7A0A087X1C5 515 aa6.27□□□□□ -1.41
VPS33B-203ENST00000554264 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.27□□□□□ -1.41
VPS33B-203ENST00000554264 PP2D1A8MPX8 630 aa6.27□□□□□ -1.41
VPS33B-203ENST00000554264 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.27□□□□□ -1.41
VPS33B-203ENST00000554264 F5H6K3 240 aa6.27□□□□□ -1.41
VPS33B-203ENST00000554264 SMIM22K7EJ46 135 aa6.27□□□□□ -1.41
VPS33B-203ENST00000554264 RFXAPO00287 272 aa6.27□□□□□ -1.41
VPS33B-203ENST00000554264 O00370 1275 aa6.27□□□□□ -1.41
VPS33B-203ENST00000554264 KCNK3O14649 394 aa6.27□□□□□ -1.41
VPS33B-203ENST00000554264 EIF3DO15371 548 aaKnown RBP eCLIP6.27□□□□□ -1.41
VPS33B-203ENST00000554264 RAD51CO43502 376 aa6.27□□□□□ -1.41
VPS33B-203ENST00000554264 CYTH3O43739 400 aa6.27□□□□□ -1.41
VPS33B-203ENST00000554264 MARCH6O60337 910 aa6.27□□□□□ -1.41
VPS33B-203ENST00000554264 B4GALT4O60513 344 aa6.27□□□□□ -1.41
VPS33B-203ENST00000554264 NMT2O60551 498 aa6.27□□□□□ -1.41
VPS33B-203ENST00000554264 NOL4O94818 638 aa6.27□□□□□ -1.41
VPS33B-203ENST00000554264 NDUFB10O96000 172 aa6.27□□□□□ -1.41
VPS33B-203ENST00000554264 FOSP01100 380 aaPredicted RBP6.27□□□□□ -1.41
VPS33B-203ENST00000554264 TMEM253P0C7T8 217 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms