RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 MRRFQ96E11 262 aaKnown RBP9.88□□□□□ -0.83
SIX4-202ENST00000554079 C8orf48Q96LL4 319 aa9.88□□□□□ -0.83
SIX4-202ENST00000554079 FRMD8Q9BZ67 464 aaPredicted RBP9.88□□□□□ -0.83
SIX4-202ENST00000554079 TRIT1Q9H3H1 467 aaKnown RBP9.88□□□□□ -0.83
SIX4-202ENST00000554079 PCDH12Q9NPG4 1184 aa9.88□□□□□ -0.83
SIX4-202ENST00000554079 GCNT4Q9P109 453 aa9.88□□□□□ -0.83
SIX4-202ENST00000554079 FETUBQ9UGM5 382 aa9.88□□□□□ -0.83
SIX4-202ENST00000554079 BCAP29Q9UHQ4 241 aa9.88□□□□□ -0.83
SIX4-202ENST00000554079 SLC8A2Q9UPR5 921 aa9.88□□□□□ -0.83
SIX4-202ENST00000554079 SCN7AQ01118 1682 aa9.88□□□□□ -0.83
SIX4-202ENST00000554079 RBBP6Q7Z6E9 1792 aaKnown RBP9.88□□□□□ -0.83
SIX4-202ENST00000554079 CICQ96RK0 1608 aaPredicted RBP9.88□□□□□ -0.83
SIX4-202ENST00000554079 PRSS51A0A1B0GVH4 220 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 H0YJX3 145 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 GOLGA8RI6L899 631 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 SMIM22K7EJ46 135 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 GCATO75600 419 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 GABBR2O75899 941 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 DDHD2O94830 711 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 ZNF26P17031 533 aaPredicted RBP9.87□□□□□ -0.83
SIX4-202ENST00000554079 M6PRP20645 277 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 IL4RP24394 825 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 EPHA3P29320 983 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 NKX2-5P52952 324 aaPredicted RBP9.87□□□□□ -0.83
SIX4-202ENST00000554079 COPAP53621 1224 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 C19orf57Q0VDD7 668 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 NFATC3Q12968 1075 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 PTK2BQ14289 1009 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 NPTX1Q15818 432 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 ATAD3BQ5T9A4 648 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 ADGRD1Q6QNK2 874 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 TMEM26Q6ZUK4 368 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 DENND5BQ6ZUT9 1274 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 DSG4Q86SJ6 1040 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 ARID3BQ8IVW6 561 aaPredicted RBP9.87□□□□□ -0.83
SIX4-202ENST00000554079 HACE1Q8IYU2 909 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 TMEM102Q8N9M5 508 aaPredicted RBP9.87□□□□□ -0.83
SIX4-202ENST00000554079 FLAD1Q8NFF5 587 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.87□□□□□ -0.83
SIX4-202ENST00000554079 TTC17Q96AE7 1141 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 SDCCAG3Q96C92 435 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 ZNF597Q96LX8 424 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 KLF6Q99612 283 aaPredicted RBP9.87□□□□□ -0.83
SIX4-202ENST00000554079 TRIM56Q9BRZ2 755 aaKnown RBP9.87□□□□□ -0.83
SIX4-202ENST00000554079 NPLQ9BXD5 320 aaPredicted RBP9.87□□□□□ -0.83
SIX4-202ENST00000554079 VPS37BQ9H9H4 285 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 XPNPEP1Q9NQW7 623 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 ARFGEF1Q9Y6D6 1849 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 ROBO1Q9Y6N7 1651 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 ATRNL1Q5VV63 1379 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 A0A087WXM4 84 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 GOLGA8QA0A0J9YX86 632 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 FAM172BPA6NC97 362 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 GOLGA8OA6NCC3 632 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 TRIM64A6NGJ6 449 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 SYCE1LA8MT33 242 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 F5H6K3 240 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 GOLGA8NF8WBI6 632 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 FAM189A1O60320 539 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 KRT6AP02538 564 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 KRT6BP04259 564 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 TNFAIP3P21580 790 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 ACAT1P24752 427 aaKnown RBP9.87□□□□□ -0.83
SIX4-202ENST00000554079 KLRC2P26717 231 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 NMT1P30419 496 aaKnown RBP9.87□□□□□ -0.83
SIX4-202ENST00000554079 GRIA3P42263 894 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 ZNF135P52742 658 aaPredicted RBP9.87□□□□□ -0.83
SIX4-202ENST00000554079 AQP5P55064 265 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 GNG2P59768 71 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 NFE2Q16621 373 aaPredicted RBP9.87□□□□□ -0.83
SIX4-202ENST00000554079 LRIT3Q3SXY7 679 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 TMEM119Q4V9L6 283 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 TEX44Q53QW1 395 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 CAVIN4Q5BKX8 364 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 PPP6R3Q5H9R7 873 aaPredicted RBP9.87□□□□□ -0.83
SIX4-202ENST00000554079 ZNF618Q5T7W0 954 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 ZFP1Q6P2D0 407 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 TRIM72Q6ZMU5 477 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 PPP4R3CPQ6ZMV5 832 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 TAS2R42Q7RTR8 314 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 BTLAQ7Z6A9 289 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 KIAA2013Q8IYS2 634 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 DEFB107AQ8IZN7 70 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 TOR1AIP2Q8NFQ8 470 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 NEDD1Q8NHV4 660 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 KBTBD7Q8WVZ9 684 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 DCPSQ96C86 337 aaKnown RBP9.87□□□□□ -0.83
SIX4-202ENST00000554079 APOPT1Q96IL0 206 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 TXNDC15Q96J42 360 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 FAM111AQ96PZ2 611 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 PKP2Q99959 881 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 NAA50Q9GZZ1 169 aaKnown RBP9.87□□□□□ -0.83
SIX4-202ENST00000554079 CLPBQ9H078 707 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 COPS7BQ9H9Q2 264 aaPredicted RBP9.87□□□□□ -0.83
SIX4-202ENST00000554079 NANOGQ9H9S0 305 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 CXorf21Q9HAI6 301 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 CYP4F11Q9HBI6 524 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 KCNN3Q9UGI6 736 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 SEPT3Q9UH03 358 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 ZNF652Q9Y2D9 606 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms