RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 PTPRBP23467 1997 aa9.6□□□□□ -0.87
SYNE2-209ENST00000553308 A0A1B0GTW7 788 aa9.59□□□□□ -0.87
SYNE2-209ENST00000553308 KCNJ18B7U540 433 aa9.59□□□□□ -0.87
SYNE2-209ENST00000553308 GFRA2O00451 464 aa9.59□□□□□ -0.87
SYNE2-209ENST00000553308 MDM4O15151 490 aa9.59□□□□□ -0.87
SYNE2-209ENST00000553308 CYP26A1O43174 497 aa9.59□□□□□ -0.87
SYNE2-209ENST00000553308 PHACTR2O75167 634 aa9.59□□□□□ -0.87
SYNE2-209ENST00000553308 NCAM1P13591 858 aa9.59□□□□□ -0.87
SYNE2-209ENST00000553308 ATICP31939 592 aa9.59□□□□□ -0.87
SYNE2-209ENST00000553308 MAP3K7CLP57077 242 aa9.59□□□□□ -0.87
SYNE2-209ENST00000553308 ASIC1P78348 528 aa9.59□□□□□ -0.87
SYNE2-209ENST00000553308 BNC1Q01954 994 aa9.59□□□□□ -0.87
SYNE2-209ENST00000553308 ZNF699Q32M78 642 aa9.59□□□□□ -0.87
SYNE2-209ENST00000553308 FAM26FQ5R3K3 315 aa9.59□□□□□ -0.87
SYNE2-209ENST00000553308 CACUL1Q86Y37 369 aa9.59□□□□□ -0.87
SYNE2-209ENST00000553308 MARCH9Q86YJ5 346 aa9.59□□□□□ -0.87
SYNE2-209ENST00000553308 XXYLT1Q8NBI6 393 aa9.59□□□□□ -0.87
SYNE2-209ENST00000553308 ZNF507Q8TCN5 953 aa9.59□□□□□ -0.87
SYNE2-209ENST00000553308 PLEKHO2Q8TD55 490 aa9.59□□□□□ -0.87
SYNE2-209ENST00000553308 SLC2A14Q8TDB8 520 aa9.59□□□□□ -0.87
SYNE2-209ENST00000553308 SETD7Q8WTS6 366 aaKnown RBP9.59□□□□□ -0.87
SYNE2-209ENST00000553308 DNASE2BQ8WZ79 361 aa9.59□□□□□ -0.87
SYNE2-209ENST00000553308 JAKMIP2Q96AA8 810 aa9.59□□□□□ -0.87
SYNE2-209ENST00000553308 TNIP3Q96KP6 325 aa9.59□□□□□ -0.87
SYNE2-209ENST00000553308 USP28Q96RU2 1077 aa9.59□□□□□ -0.87
SYNE2-209ENST00000553308 ZDHHC5Q9C0B5 715 aa9.59□□□□□ -0.87
SYNE2-209ENST00000553308 MKRN2Q9H000 416 aaKnown RBP9.59□□□□□ -0.87
SYNE2-209ENST00000553308 MIR1-1HGQ9H1L0 117 aa9.59□□□□□ -0.87
SYNE2-209ENST00000553308 TNMDQ9H2S6 317 aa9.59□□□□□ -0.87
SYNE2-209ENST00000553308 GAREM1Q9H706 876 aa9.59□□□□□ -0.87
SYNE2-209ENST00000553308 VRTNQ9H8Y1 702 aa9.59□□□□□ -0.87
SYNE2-209ENST00000553308 PRDM16Q9HAZ2 1276 aa9.59□□□□□ -0.87
SYNE2-209ENST00000553308 CYLDQ9NQC7 956 aa9.59□□□□□ -0.87
SYNE2-209ENST00000553308 TLR8Q9NR97 1041 aaKnown RBP9.59□□□□□ -0.87
SYNE2-209ENST00000553308 FAM49BQ9NUQ9 324 aa9.59□□□□□ -0.87
SYNE2-209ENST00000553308 COMMD8Q9NX08 183 aa9.59□□□□□ -0.87
SYNE2-209ENST00000553308 TOR4AQ9NXH8 423 aa9.59□□□□□ -0.87
SYNE2-209ENST00000553308 WSB2Q9NYS7 404 aaPredicted RBP9.59□□□□□ -0.87
SYNE2-209ENST00000553308 USP36Q9P275 1121 aaKnown RBP9.59□□□□□ -0.87
SYNE2-209ENST00000553308 WDR35Q9P2L0 1181 aa9.59□□□□□ -0.87
SYNE2-209ENST00000553308 HMGXB4Q9UGU5 601 aa9.59□□□□□ -0.87
SYNE2-209ENST00000553308 LSM7Q9UK45 103 aaKnown RBP9.59□□□□□ -0.87
SYNE2-209ENST00000553308 NUDT5Q9UKK9 219 aa9.59□□□□□ -0.87
SYNE2-209ENST00000553308 STON1Q9Y6Q2 735 aa9.59□□□□□ -0.87
SYNE2-209ENST00000553308 CILPO75339 1184 aa9.58□□□□□ -0.88
SYNE2-209ENST00000553308 ATXN1LP0C7T5 689 aaKnown RBP9.58□□□□□ -0.88
SYNE2-209ENST00000553308 ATP5C1P36542 298 aaKnown RBP9.58□□□□□ -0.88
SYNE2-209ENST00000553308 IL12RB1P42701 662 aa9.58□□□□□ -0.88
SYNE2-209ENST00000553308 TPMTP51580 245 aa9.58□□□□□ -0.88
SYNE2-209ENST00000553308 GOLGA8FQ08AF8 430 aa9.58□□□□□ -0.88
SYNE2-209ENST00000553308 GOLGA8DPQ0D2H9 430 aa9.58□□□□□ -0.88
SYNE2-209ENST00000553308 BIRC3Q13489 604 aa9.58□□□□□ -0.88
SYNE2-209ENST00000553308 STARD3Q14849 445 aa9.58□□□□□ -0.88
SYNE2-209ENST00000553308 E2F4Q16254 413 aa9.58□□□□□ -0.88
SYNE2-209ENST00000553308 ZNF667Q5HYK9 610 aa9.58□□□□□ -0.88
SYNE2-209ENST00000553308 DCAF12L1Q5VU92 463 aa9.58□□□□□ -0.88
SYNE2-209ENST00000553308 Q6ZNB5 142 aa9.58□□□□□ -0.88
SYNE2-209ENST00000553308 BAHD1Q8TBE0 780 aaPredicted RBP9.58□□□□□ -0.88
SYNE2-209ENST00000553308 LRIG1Q96JA1 1093 aa9.58□□□□□ -0.88
SYNE2-209ENST00000553308 FBXO44Q9H4M3 255 aa9.58□□□□□ -0.88
SYNE2-209ENST00000553308 NMUR1Q9HB89 426 aa9.58□□□□□ -0.88
SYNE2-209ENST00000553308 CSNK1G1Q9HCP0 422 aa9.58□□□□□ -0.88
SYNE2-209ENST00000553308 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.58□□□□□ -0.88
SYNE2-209ENST00000553308 TM7SF3Q9NS93 570 aa9.58□□□□□ -0.88
SYNE2-209ENST00000553308 KBTBD4Q9NVX7 518 aa9.58□□□□□ -0.88
SYNE2-209ENST00000553308 NFE2L3Q9Y4A8 694 aa9.58□□□□□ -0.88
SYNE2-209ENST00000553308 SLCO1B1Q9Y6L6 691 aa9.58□□□□□ -0.88
SYNE2-209ENST00000553308 DSPP15924 2871 aaKnown RBP9.57□□□□□ -0.88
SYNE2-209ENST00000553308 UBE4BO95155 1302 aa9.57□□□□□ -0.88
SYNE2-209ENST00000553308 A0A1W2PQH9 124 aa9.57□□□□□ -0.88
SYNE2-209ENST00000553308 GOLGA8CPA6NN73 597 aa9.57□□□□□ -0.88
SYNE2-209ENST00000553308 LRRIQ3A6PVS8 624 aaPredicted RBP9.57□□□□□ -0.88
SYNE2-209ENST00000553308 METTL12A8MUP2 240 aa9.57□□□□□ -0.88
SYNE2-209ENST00000553308 HHLA1C9JL84 531 aa9.57□□□□□ -0.88
SYNE2-209ENST00000553308 BCAT2O15382 392 aaPredicted RBP9.57□□□□□ -0.88
SYNE2-209ENST00000553308 STC2O76061 302 aa9.57□□□□□ -0.88
SYNE2-209ENST00000553308 VNN1O95497 513 aa9.57□□□□□ -0.88
SYNE2-209ENST00000553308 CER1O95813 267 aa9.57□□□□□ -0.88
SYNE2-209ENST00000553308 ZNF883P0CG24 379 aa9.57□□□□□ -0.88
SYNE2-209ENST00000553308 ADORA2BP29275 332 aa9.57□□□□□ -0.88
SYNE2-209ENST00000553308 CASP1P29466 404 aa9.57□□□□□ -0.88
SYNE2-209ENST00000553308 MATKP42679 507 aa9.57□□□□□ -0.88
SYNE2-209ENST00000553308 NDST1P52848 882 aa9.57□□□□□ -0.88
SYNE2-209ENST00000553308 MFAP3P55082 362 aa9.57□□□□□ -0.88
SYNE2-209ENST00000553308 NCOA4Q13772 614 aa9.57□□□□□ -0.88
SYNE2-209ENST00000553308 SLC39A14Q15043 492 aa9.57□□□□□ -0.88
SYNE2-209ENST00000553308 GEN1Q17RS7 908 aa9.57□□□□□ -0.88
SYNE2-209ENST00000553308 HLA-BQ31612 363 aa9.57□□□□□ -0.88
SYNE2-209ENST00000553308 C10orf120Q5SQS8 335 aa9.57□□□□□ -0.88
SYNE2-209ENST00000553308 TMPRSS7Q7RTY8 843 aa9.57□□□□□ -0.88
SYNE2-209ENST00000553308 METTL3Q86U44 580 aaKnown RBP9.57□□□□□ -0.88
SYNE2-209ENST00000553308 TMPRSS6Q8IU80 811 aa9.57□□□□□ -0.88
SYNE2-209ENST00000553308 C12orf29Q8N999 325 aa9.57□□□□□ -0.88
SYNE2-209ENST00000553308 CADM4Q8NFZ8 388 aa9.57□□□□□ -0.88
SYNE2-209ENST00000553308 DHX58Q96C10 678 aa9.57□□□□□ -0.88
SYNE2-209ENST00000553308 CRELD1Q96HD1 420 aa9.57□□□□□ -0.88
SYNE2-209ENST00000553308 SCUBE2Q9NQ36 999 aa9.57□□□□□ -0.88
SYNE2-209ENST00000553308 ITM2CQ9NQX7 267 aa9.57□□□□□ -0.88
SYNE2-209ENST00000553308 KIAA1522Q9P206 1035 aaPredicted RBP9.57□□□□□ -0.88
SYNE2-209ENST00000553308 THAP10Q9P2Z0 257 aaPredicted RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms