RNA–Protein interactions for RNA: ENST00000552973.1

NEK3-204, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-204ENST00000552973 CYP3A43Q9HB55 503 aa12.09□□□□□ -0.47
NEK3-204ENST00000552973 CYLDQ9NQC7 956 aa12.09□□□□□ -0.47
NEK3-204ENST00000552973 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.09□□□□□ -0.47
NEK3-204ENST00000552973 CALCOCO1Q9P1Z2 691 aa12.09□□□□□ -0.47
NEK3-204ENST00000552973 RASAL2Q9UJF2 1139 aa12.09□□□□□ -0.47
NEK3-204ENST00000552973 WDR87Q6ZQQ6 2873 aa12.08□□□□□ -0.47
NEK3-204ENST00000552973 GREB1Q4ZG55 1949 aa12.08□□□□□ -0.48
NEK3-204ENST00000552973 WASH3PC4AMC7 463 aa12.08□□□□□ -0.48
NEK3-204ENST00000552973 MAPK13O15264 365 aa12.08□□□□□ -0.48
NEK3-204ENST00000552973 CFIP05156 583 aa12.08□□□□□ -0.48
NEK3-204ENST00000552973 ENGP17813 658 aa12.08□□□□□ -0.48
NEK3-204ENST00000552973 PLA2G4AP47712 749 aa12.08□□□□□ -0.48
NEK3-204ENST00000552973 DGKGP49619 791 aa12.08□□□□□ -0.48
NEK3-204ENST00000552973 KIF11P52732 1056 aa12.08□□□□□ -0.48
NEK3-204ENST00000552973 SDE2Q6IQ49 451 aa12.08□□□□□ -0.48
NEK3-204ENST00000552973 KRBA2Q6ZNG9 492 aa12.08□□□□□ -0.48
NEK3-204ENST00000552973 SYT12Q8IV01 421 aa12.08□□□□□ -0.48
NEK3-204ENST00000552973 SMYD4Q8IYR2 804 aaPredicted RBP12.08□□□□□ -0.48
NEK3-204ENST00000552973 CCDC150Q8NCX0 1101 aa12.08□□□□□ -0.48
NEK3-204ENST00000552973 DEFB124Q8NES8 71 aa12.08□□□□□ -0.48
NEK3-204ENST00000552973 KCNV2Q8TDN2 545 aa12.08□□□□□ -0.48
NEK3-204ENST00000552973 IPO4Q8TEX9 1081 aaKnown RBP12.08□□□□□ -0.48
NEK3-204ENST00000552973 SEMA4DQ92854 862 aa12.08□□□□□ -0.48
NEK3-204ENST00000552973 P2RY11Q96G91 374 aa12.08□□□□□ -0.48
NEK3-204ENST00000552973 DUSP9Q99956 384 aaKnown RBP12.08□□□□□ -0.48
NEK3-204ENST00000552973 DUSP16Q9BY84 665 aa12.08□□□□□ -0.48
NEK3-204ENST00000552973 NIF3L1Q9GZT8 377 aa12.08□□□□□ -0.48
NEK3-204ENST00000552973 GOLPH3LQ9H4A5 285 aa12.08□□□□□ -0.48
NEK3-204ENST00000552973 GDPD2Q9HCC8 539 aa12.08□□□□□ -0.48
NEK3-204ENST00000552973 CD93Q9NPY3 652 aa12.08□□□□□ -0.48
NEK3-204ENST00000552973 CACNA2D2Q9NY47 1150 aa12.08□□□□□ -0.48
NEK3-204ENST00000552973 WDR35Q9P2L0 1181 aa12.08□□□□□ -0.48
NEK3-204ENST00000552973 DNMT3LQ9UJW3 386 aa12.08□□□□□ -0.48
NEK3-204ENST00000552973 CYP8B1Q9UNU6 501 aa12.08□□□□□ -0.48
NEK3-204ENST00000552973 STARD13Q9Y3M8 1113 aa12.08□□□□□ -0.48
NEK3-204ENST00000552973 SPTBN2O15020 2390 aa12.08□□□□□ -0.48
NEK3-204ENST00000552973 ZBTB24O43167 697 aaPredicted RBP12.07□□□□□ -0.48
NEK3-204ENST00000552973 CACNG3O60359 315 aa12.07□□□□□ -0.48
NEK3-204ENST00000552973 STC2O76061 302 aa12.07□□□□□ -0.48
NEK3-204ENST00000552973 KLKB1P03952 638 aa12.07□□□□□ -0.48
NEK3-204ENST00000552973 CISD3P0C7P0 127 aa12.07□□□□□ -0.48
NEK3-204ENST00000552973 NDUFV2P19404 249 aa12.07□□□□□ -0.48
NEK3-204ENST00000552973 RPL13P26373 211 aaKnown RBP12.07□□□□□ -0.48
NEK3-204ENST00000552973 SHC2P98077 582 aa12.07□□□□□ -0.48
NEK3-204ENST00000552973 ZNF33AQ06730 810 aa12.07□□□□□ -0.48
NEK3-204ENST00000552973 EFEMP1Q12805 493 aa12.07□□□□□ -0.48
NEK3-204ENST00000552973 LMAN2Q12907 356 aa12.07□□□□□ -0.48
NEK3-204ENST00000552973 NFIL3Q16649 462 aa12.07□□□□□ -0.48
NEK3-204ENST00000552973 KRT39Q6A163 491 aa12.07□□□□□ -0.48
NEK3-204ENST00000552973 GUF1Q8N442 669 aaKnown RBP12.07□□□□□ -0.48
NEK3-204ENST00000552973 TATDN2Q93075 761 aa12.07□□□□□ -0.48
NEK3-204ENST00000552973 GTPBP2Q9BX10 602 aaKnown RBP12.07□□□□□ -0.48
NEK3-204ENST00000552973 TMEM8AQ9HCN3 771 aa12.07□□□□□ -0.48
NEK3-204ENST00000552973 MARK1Q9P0L2 795 aa12.07□□□□□ -0.48
NEK3-204ENST00000552973 EVLQ9UI08 416 aaPredicted RBP12.07□□□□□ -0.48
NEK3-204ENST00000552973 PILRBQ9UKJ0 227 aa12.07□□□□□ -0.48
NEK3-204ENST00000552973 PCDHA5Q9Y5H7 936 aa12.07□□□□□ -0.48
NEK3-204ENST00000552973 RALGAPA1Q6GYQ0 2036 aa12.06□□□□□ -0.48
NEK3-204ENST00000552973 PTPRDP23468 1912 aa12.06□□□□□ -0.48
NEK3-204ENST00000552973 IGHV1OR15-9A0A0B4J2B8 117 aa12.06□□□□□ -0.48
NEK3-204ENST00000552973 FAM237AA0A1B0GTK4 181 aa12.06□□□□□ -0.48
NEK3-204ENST00000552973 C1QTNF9BB2RNN3 333 aa12.06□□□□□ -0.48
NEK3-204ENST00000552973 AP5Z1O43299 807 aa12.06□□□□□ -0.48
NEK3-204ENST00000552973 ZNF202O95125 648 aa12.06□□□□□ -0.48
NEK3-204ENST00000552973 C1QTNF9P0C862 333 aa12.06□□□□□ -0.48
NEK3-204ENST00000552973 RALAP11233 206 aa12.06□□□□□ -0.48
NEK3-204ENST00000552973 ATXN3P54252 364 aaPredicted RBP12.06□□□□□ -0.48
NEK3-204ENST00000552973 KLHDC10Q6PID8 442 aa12.06□□□□□ -0.48
NEK3-204ENST00000552973 KIAA1324Q6UXG2 1013 aaKnown RBP12.06□□□□□ -0.48
NEK3-204ENST00000552973 Q6ZNB5 142 aa12.06□□□□□ -0.48
NEK3-204ENST00000552973 CCDC186Q7Z3E2 898 aa12.06□□□□□ -0.48
NEK3-204ENST00000552973 PIGZQ86VD9 579 aa12.06□□□□□ -0.48
NEK3-204ENST00000552973 SLC41A1Q8IVJ1 513 aa12.06□□□□□ -0.48
NEK3-204ENST00000552973 OR2I1PQ8NGU4 316 aa12.06□□□□□ -0.48
NEK3-204ENST00000552973 NDRG1Q92597 394 aaKnown RBP12.06□□□□□ -0.48
NEK3-204ENST00000552973 TMEM176AQ96HP8 235 aa12.06□□□□□ -0.48
NEK3-204ENST00000552973 ARID3AQ99856 593 aa12.06□□□□□ -0.48
NEK3-204ENST00000552973 PNPLA8Q9NP80 782 aa12.06□□□□□ -0.48
NEK3-204ENST00000552973 CISHQ9NSE2 258 aa12.06□□□□□ -0.48
NEK3-204ENST00000552973 RAB20Q9NX57 234 aa12.06□□□□□ -0.48
NEK3-204ENST00000552973 USP3Q9Y6I4 520 aa12.06□□□□□ -0.48
NEK3-204ENST00000552973 EML5Q05BV3 1969 aa12.06□□□□□ -0.48
NEK3-204ENST00000552973 SLC12A8A0AV02 714 aa12.05□□□□□ -0.48
NEK3-204ENST00000552973 TULP2O00295 520 aa12.05□□□□□ -0.48
NEK3-204ENST00000552973 CEACAM1P13688 526 aa12.05□□□□□ -0.48
NEK3-204ENST00000552973 CSRP1P21291 193 aaKnown RBP12.05□□□□□ -0.48
NEK3-204ENST00000552973 MAOBP27338 520 aa12.05□□□□□ -0.48
NEK3-204ENST00000552973 CORO1AP31146 461 aaKnown RBP12.05□□□□□ -0.48
NEK3-204ENST00000552973 PSEN1P49768 467 aa12.05□□□□□ -0.48
NEK3-204ENST00000552973 MXI1P50539 228 aa12.05□□□□□ -0.48
NEK3-204ENST00000552973 RAD23BP54727 409 aa12.05□□□□□ -0.48
NEK3-204ENST00000552973 PNOCQ13519 176 aa12.05□□□□□ -0.48
NEK3-204ENST00000552973 DUOXA1Q1HG43 343 aa12.05□□□□□ -0.48
NEK3-204ENST00000552973 ZCWPW2Q504Y3 356 aa12.05□□□□□ -0.48
NEK3-204ENST00000552973 SPDYCQ5MJ68 293 aa12.05□□□□□ -0.48
NEK3-204ENST00000552973 SLC23A3Q6PIS1 610 aa12.05□□□□□ -0.48
NEK3-204ENST00000552973 SLC36A4Q6YBV0 504 aa12.05□□□□□ -0.48
NEK3-204ENST00000552973 TADA2BQ86TJ2 420 aa12.05□□□□□ -0.48
NEK3-204ENST00000552973 DENND1CQ8IV53 801 aa12.05□□□□□ -0.48
NEK3-204ENST00000552973 RGL4Q8IZJ4 473 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms