RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 MARK1Q9P0L2 795 aa12.07□□□□□ -0.48
SUPT16H-202ENST00000552829 GMIPQ9P107 970 aa12.07□□□□□ -0.48
SUPT16H-202ENST00000552829 EIF2B4Q9UI10 523 aaKnown RBP12.07□□□□□ -0.48
SUPT16H-202ENST00000552829 NME7Q9Y5B8 376 aa12.07□□□□□ -0.48
SUPT16H-202ENST00000552829 SLCO1B1Q9Y6L6 691 aa12.07□□□□□ -0.48
SUPT16H-202ENST00000552829 ARHGAP6O43182 974 aa12.06□□□□□ -0.48
SUPT16H-202ENST00000552829 SLC26A4O43511 780 aa12.06□□□□□ -0.48
SUPT16H-202ENST00000552829 PDGFRBP09619 1106 aa12.06□□□□□ -0.48
SUPT16H-202ENST00000552829 ZDHHC11BP0C7U3 371 aa12.06□□□□□ -0.48
SUPT16H-202ENST00000552829 WARSP23381 471 aaKnown RBP12.06□□□□□ -0.48
SUPT16H-202ENST00000552829 ANXA13P27216 316 aa12.06□□□□□ -0.48
SUPT16H-202ENST00000552829 OXTRP30559 389 aa12.06□□□□□ -0.48
SUPT16H-202ENST00000552829 CSNK1EP49674 416 aaKnown RBP12.06□□□□□ -0.48
SUPT16H-202ENST00000552829 KIF19Q2TAC6 998 aa12.06□□□□□ -0.48
SUPT16H-202ENST00000552829 HECTD3Q5T447 861 aa12.06□□□□□ -0.48
SUPT16H-202ENST00000552829 HTR3DQ70Z44 454 aa12.06□□□□□ -0.48
SUPT16H-202ENST00000552829 POMGNT1Q8WZA1 660 aa12.06□□□□□ -0.48
SUPT16H-202ENST00000552829 WBP1Q96G27 269 aa12.06□□□□□ -0.48
SUPT16H-202ENST00000552829 LLPHQ9BRT6 129 aaKnown RBP12.06□□□□□ -0.48
SUPT16H-202ENST00000552829 TRIM9Q9C026 710 aa12.06□□□□□ -0.48
SUPT16H-202ENST00000552829 PCED1AQ9H1Q7 454 aa12.06□□□□□ -0.48
SUPT16H-202ENST00000552829 CLMPQ9H6B4 373 aa12.06□□□□□ -0.48
SUPT16H-202ENST00000552829 OSGEPQ9NPF4 335 aa12.06□□□□□ -0.48
SUPT16H-202ENST00000552829 FBXO10Q9UK96 956 aa12.06□□□□□ -0.48
SUPT16H-202ENST00000552829 SH3BP1Q9Y3L3 701 aa12.06□□□□□ -0.48
SUPT16H-202ENST00000552829 PCDHGA1Q9Y5H4 931 aa12.06□□□□□ -0.48
SUPT16H-202ENST00000552829 SNX11Q9Y5W9 270 aa12.06□□□□□ -0.48
SUPT16H-202ENST00000552829 COL12A1Q99715 3063 aa12.06□□□□□ -0.48
SUPT16H-202ENST00000552829 RRP8O43159 456 aaKnown RBP12.05□□□□□ -0.48
SUPT16H-202ENST00000552829 C7P10643 843 aa12.05□□□□□ -0.48
SUPT16H-202ENST00000552829 TYRP14679 529 aa12.05□□□□□ -0.48
SUPT16H-202ENST00000552829 ACO1P21399 889 aaKnown RBP12.05□□□□□ -0.48
SUPT16H-202ENST00000552829 YWHAQP27348 245 aa12.05□□□□□ -0.48
SUPT16H-202ENST00000552829 TUBP50607 506 aa12.05□□□□□ -0.48
SUPT16H-202ENST00000552829 ZNF132P52740 706 aa12.05□□□□□ -0.48
SUPT16H-202ENST00000552829 CYP27A1Q02318 531 aa12.05□□□□□ -0.48
SUPT16H-202ENST00000552829 SEMG2Q02383 582 aa12.05□□□□□ -0.48
SUPT16H-202ENST00000552829 TLE3Q04726 772 aa12.05□□□□□ -0.48
SUPT16H-202ENST00000552829 ZNF720Q7Z2F6 126 aa12.05□□□□□ -0.48
SUPT16H-202ENST00000552829 PDZD8Q8NEN9 1154 aa12.05□□□□□ -0.48
SUPT16H-202ENST00000552829 SCFD1Q8WVM8 642 aa12.05□□□□□ -0.48
SUPT16H-202ENST00000552829 IGSF8Q969P0 613 aa12.05□□□□□ -0.48
SUPT16H-202ENST00000552829 HVCN1Q96D96 273 aa12.05□□□□□ -0.48
SUPT16H-202ENST00000552829 P2RY11Q96G91 374 aa12.05□□□□□ -0.48
SUPT16H-202ENST00000552829 MS4A3Q96HJ5 214 aa12.05□□□□□ -0.48
SUPT16H-202ENST00000552829 FAM213AQ9BRX8 229 aa12.05□□□□□ -0.48
SUPT16H-202ENST00000552829 NRSN2Q9GZP1 204 aa12.05□□□□□ -0.48
SUPT16H-202ENST00000552829 CCSER2Q9H7U1 834 aa12.05□□□□□ -0.48
SUPT16H-202ENST00000552829 WDR35Q9P2L0 1181 aa12.05□□□□□ -0.48
SUPT16H-202ENST00000552829 CHORDC1Q9UHD1 332 aaPredicted RBP12.05□□□□□ -0.48
SUPT16H-202ENST00000552829 STON1Q9Y6Q2 735 aa12.05□□□□□ -0.48
SUPT16H-202ENST00000552829 UNC79Q9P2D8 2635 aa12.05□□□□□ -0.48
SUPT16H-202ENST00000552829 FAM92AA1XBS5 289 aa12.04□□□□□ -0.48
SUPT16H-202ENST00000552829 ERVH48-1M5A8F1 160 aa12.04□□□□□ -0.48
SUPT16H-202ENST00000552829 RTN3O95197 1032 aaPredicted RBP12.04□□□□□ -0.48
SUPT16H-202ENST00000552829 AFF3P51826 1226 aaKnown RBP12.04□□□□□ -0.48
SUPT16H-202ENST00000552829 NUCB2P80303 420 aa12.04□□□□□ -0.48
SUPT16H-202ENST00000552829 MCM6Q14566 821 aa12.04□□□□□ -0.48
SUPT16H-202ENST00000552829 MDH1BQ5I0G3 518 aa12.04□□□□□ -0.48
SUPT16H-202ENST00000552829 TMPRSS6Q8IU80 811 aa12.04□□□□□ -0.48
SUPT16H-202ENST00000552829 NUP93Q8N1F7 819 aa12.04□□□□□ -0.48
SUPT16H-202ENST00000552829 HPDLQ96IR7 371 aa12.04□□□□□ -0.48
SUPT16H-202ENST00000552829 CDK5RAP3Q96JB5 506 aa12.04□□□□□ -0.48
SUPT16H-202ENST00000552829 XPO6Q96QU8 1125 aaKnown RBP12.04□□□□□ -0.48
SUPT16H-202ENST00000552829 NUP58Q9BVL2 599 aa12.04□□□□□ -0.48
SUPT16H-202ENST00000552829 BBS2Q9BXC9 721 aa12.04□□□□□ -0.48
SUPT16H-202ENST00000552829 THAP10Q9P2Z0 257 aaPredicted RBP12.04□□□□□ -0.48
SUPT16H-202ENST00000552829 ANKRD6Q9Y2G4 727 aa12.04□□□□□ -0.48
SUPT16H-202ENST00000552829 VPS37CA5D8V6 355 aaPredicted RBP12.03□□□□□ -0.48
SUPT16H-202ENST00000552829 NEDD8-MDP1E9PL57 170 aa12.03□□□□□ -0.48
SUPT16H-202ENST00000552829 H0Y8X5 98 aa12.03□□□□□ -0.48
SUPT16H-202ENST00000552829 KCNK3O14649 394 aa12.03□□□□□ -0.48
SUPT16H-202ENST00000552829 KRT19P08727 400 aa12.03□□□□□ -0.48
SUPT16H-202ENST00000552829 C1SP09871 688 aa12.03□□□□□ -0.48
SUPT16H-202ENST00000552829 FAM163BP0C2L3 166 aa12.03□□□□□ -0.48
SUPT16H-202ENST00000552829 JUPP14923 745 aa12.03□□□□□ -0.48
SUPT16H-202ENST00000552829 PTPN1P18031 435 aaKnown RBP12.03□□□□□ -0.48
SUPT16H-202ENST00000552829 CTSKP43235 329 aa12.03□□□□□ -0.48
SUPT16H-202ENST00000552829 GRIA4P48058 902 aa12.03□□□□□ -0.48
SUPT16H-202ENST00000552829 DGKGP49619 791 aa12.03□□□□□ -0.48
SUPT16H-202ENST00000552829 PGFP49763 221 aa12.03□□□□□ -0.48
SUPT16H-202ENST00000552829 CCT8P50990 548 aa12.03□□□□□ -0.48
SUPT16H-202ENST00000552829 COPAP53621 1224 aa12.03□□□□□ -0.48
SUPT16H-202ENST00000552829 CLDN6P56747 220 aa12.03□□□□□ -0.48
SUPT16H-202ENST00000552829 KCNA1Q09470 495 aa12.03□□□□□ -0.48
SUPT16H-202ENST00000552829 GNL2Q13823 731 aaKnown RBP12.03□□□□□ -0.48
SUPT16H-202ENST00000552829 SF3A1Q15459 793 aaKnown RBP12.03□□□□□ -0.48
SUPT16H-202ENST00000552829 NFKBIBQ15653 356 aa12.03□□□□□ -0.48
SUPT16H-202ENST00000552829 CCDC157Q569K6 752 aa12.03□□□□□ -0.48
SUPT16H-202ENST00000552829 KCNT1Q5JUK3 1230 aa12.03□□□□□ -0.48
SUPT16H-202ENST00000552829 C6orf118Q5T5N4 469 aa12.03□□□□□ -0.48
SUPT16H-202ENST00000552829 ARL6IP4Q66PJ3 421 aaKnown RBP12.03□□□□□ -0.48
SUPT16H-202ENST00000552829 RBBP8NLQ8NC74 664 aaPredicted RBP12.03□□□□□ -0.48
SUPT16H-202ENST00000552829 OR5B17Q8NGF7 314 aa12.03□□□□□ -0.48
SUPT16H-202ENST00000552829 BAP1Q92560 729 aa12.03□□□□□ -0.48
SUPT16H-202ENST00000552829 FGF11Q92914 225 aa12.03□□□□□ -0.48
SUPT16H-202ENST00000552829 FBXO32Q969P5 355 aa12.03□□□□□ -0.48
SUPT16H-202ENST00000552829 SAAL1Q96ER3 474 aa12.03□□□□□ -0.48
SUPT16H-202ENST00000552829 SIPA1Q96FS4 1042 aa12.03□□□□□ -0.48
SUPT16H-202ENST00000552829 KLF16Q9BXK1 252 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms