RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 CCDC184Q52MB2 194 aa4.53□□□□□ -1.68
LSM6P2-201ENST00000552208 TMEM196Q5HYL7 178 aa4.53□□□□□ -1.68
LSM6P2-201ENST00000552208 CBWD5Q5RIA9 395 aa4.53□□□□□ -1.68
LSM6P2-201ENST00000552208 RBM20Q5T481 1227 aaKnown RBP4.53□□□□□ -1.68
LSM6P2-201ENST00000552208 ICE2Q659A1 982 aa4.53□□□□□ -1.68
LSM6P2-201ENST00000552208 MICALCLQ6ZW33 695 aa4.53□□□□□ -1.68
LSM6P2-201ENST00000552208 LRRC8DQ7L1W4 858 aa4.53□□□□□ -1.68
LSM6P2-201ENST00000552208 ADGRG5Q8IZF4 528 aa4.53□□□□□ -1.68
LSM6P2-201ENST00000552208 NGEFQ8N5V2 710 aa4.53□□□□□ -1.68
LSM6P2-201ENST00000552208 MIEF2Q96C03 454 aa4.53□□□□□ -1.68
LSM6P2-201ENST00000552208 APOPT1Q96IL0 206 aa4.53□□□□□ -1.68
LSM6P2-201ENST00000552208 LRRC37BQ96QE4 947 aa4.53□□□□□ -1.68
LSM6P2-201ENST00000552208 ZSWIM1Q9BR11 485 aa4.53□□□□□ -1.68
LSM6P2-201ENST00000552208 NUDT16L1Q9BRJ7 211 aaKnown RBP4.53□□□□□ -1.68
LSM6P2-201ENST00000552208 C17orf80Q9BSJ5 609 aa4.53□□□□□ -1.68
LSM6P2-201ENST00000552208 HERC2P3Q9BVR0 1158 aa4.53□□□□□ -1.68
LSM6P2-201ENST00000552208 AMBRA1Q9C0C7 1298 aa4.53□□□□□ -1.68
LSM6P2-201ENST00000552208 ARHGAP39Q9C0H5 1083 aa4.53□□□□□ -1.68
LSM6P2-201ENST00000552208 USP44Q9H0E7 712 aa4.53□□□□□ -1.68
LSM6P2-201ENST00000552208 NRDE2Q9H7Z3 1164 aa4.53□□□□□ -1.68
LSM6P2-201ENST00000552208 RMI1Q9H9A7 625 aa4.53□□□□□ -1.68
LSM6P2-201ENST00000552208 PLSCR4Q9NRQ2 329 aa4.53□□□□□ -1.68
LSM6P2-201ENST00000552208 NAALADL1Q9UQQ1 740 aa4.53□□□□□ -1.68
LSM6P2-201ENST00000552208 RCE1Q9Y256 329 aa4.53□□□□□ -1.68
LSM6P2-201ENST00000552208 USP15Q9Y4E8 981 aaPredicted RBP4.53□□□□□ -1.68
LSM6P2-201ENST00000552208 SETD1BQ9UPS6 1966 aaKnown RBP4.53□□□□□ -1.68
LSM6P2-201ENST00000552208 DIRC3C9JPN6 131 aa4.52□□□□□ -1.69
LSM6P2-201ENST00000552208 H3BNC9 293 aa4.52□□□□□ -1.69
LSM6P2-201ENST00000552208 M0QYT0 321 aa4.52□□□□□ -1.69
LSM6P2-201ENST00000552208 RFXAPO00287 272 aa4.52□□□□□ -1.69
LSM6P2-201ENST00000552208 TOR1BO14657 336 aa4.52□□□□□ -1.69
LSM6P2-201ENST00000552208 SEPT4O43236 478 aa4.52□□□□□ -1.69
LSM6P2-201ENST00000552208 AHCYL1O43865 530 aa4.52□□□□□ -1.69
LSM6P2-201ENST00000552208 RAD17O75943 681 aa4.52□□□□□ -1.69
LSM6P2-201ENST00000552208 URI1O94763 535 aaPredicted RBP4.52□□□□□ -1.69
LSM6P2-201ENST00000552208 WDR47O94967 919 aa4.52□□□□□ -1.69
LSM6P2-201ENST00000552208 MLYCDO95822 493 aa4.52□□□□□ -1.69
LSM6P2-201ENST00000552208 GPANK1O95872 356 aa4.52□□□□□ -1.69
LSM6P2-201ENST00000552208 ERBB2P04626 1255 aa4.52□□□□□ -1.69
LSM6P2-201ENST00000552208 APOBEC3AP31941 199 aaPredicted RBP4.52□□□□□ -1.69
LSM6P2-201ENST00000552208 STAT1P42224 750 aa4.52□□□□□ -1.69
LSM6P2-201ENST00000552208 NPTX2P47972 431 aa4.52□□□□□ -1.69
LSM6P2-201ENST00000552208 RPS7P62081 194 aaKnown RBP4.52□□□□□ -1.69
LSM6P2-201ENST00000552208 VMACQ2NL98 169 aa4.52□□□□□ -1.69
LSM6P2-201ENST00000552208 AASDHQ4L235 1098 aaPredicted RBP4.52□□□□□ -1.69
LSM6P2-201ENST00000552208 SNX30Q5VWJ9 437 aa4.52□□□□□ -1.69
LSM6P2-201ENST00000552208 B3GNTL1Q67FW5 361 aaPredicted RBP4.52□□□□□ -1.69
LSM6P2-201ENST00000552208 INO80CQ6PI98 192 aaPredicted RBP4.52□□□□□ -1.69
LSM6P2-201ENST00000552208 ARHGEF18Q6ZSZ5 1173 aa4.52□□□□□ -1.69
LSM6P2-201ENST00000552208 B4GALNT4Q76KP1 1039 aa4.52□□□□□ -1.69
LSM6P2-201ENST00000552208 PLEKHH3Q7Z736 793 aa4.52□□□□□ -1.69
LSM6P2-201ENST00000552208 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.52□□□□□ -1.69
LSM6P2-201ENST00000552208 MAPKAPK5Q8IW41 473 aa4.52□□□□□ -1.69
LSM6P2-201ENST00000552208 IZUMO1Q8IYV9 350 aa4.52□□□□□ -1.69
LSM6P2-201ENST00000552208 LGI4Q8N135 537 aa4.52□□□□□ -1.69
LSM6P2-201ENST00000552208 FSTL5Q8N475 847 aaPredicted RBP4.52□□□□□ -1.69
LSM6P2-201ENST00000552208 MB21D1Q8N884 522 aa4.52□□□□□ -1.69
LSM6P2-201ENST00000552208 C11orf44Q8N8P7 122 aa4.52□□□□□ -1.69
LSM6P2-201ENST00000552208 FAM71DQ8N9W8 422 aa4.52□□□□□ -1.69
LSM6P2-201ENST00000552208 LSM14AQ8ND56 463 aaKnown RBP4.52□□□□□ -1.69
LSM6P2-201ENST00000552208 LINS1Q8NG48 757 aa4.52□□□□□ -1.69
LSM6P2-201ENST00000552208 ATG4AQ8WYN0 398 aa4.52□□□□□ -1.69
LSM6P2-201ENST00000552208 OVCA2Q8WZ82 227 aa4.52□□□□□ -1.69
LSM6P2-201ENST00000552208 FAM84AQ96KN4 292 aa4.52□□□□□ -1.69
LSM6P2-201ENST00000552208 SDF4Q9BRK5 362 aa4.52□□□□□ -1.69
LSM6P2-201ENST00000552208 TEX101Q9BY14 249 aa4.52□□□□□ -1.69
LSM6P2-201ENST00000552208 TRIM36Q9NQ86 728 aa4.52□□□□□ -1.69
LSM6P2-201ENST00000552208 NKIRAS2Q9NYR9 191 aa4.52□□□□□ -1.69
LSM6P2-201ENST00000552208 TBC1D14Q9P2M4 693 aa4.52□□□□□ -1.69
LSM6P2-201ENST00000552208 STEAP1Q9UHE8 339 aa4.52□□□□□ -1.69
LSM6P2-201ENST00000552208 KCNE5Q9UJ90 142 aa4.52□□□□□ -1.69
LSM6P2-201ENST00000552208 SERTAD3Q9UJW9 196 aa4.52□□□□□ -1.69
LSM6P2-201ENST00000552208 DRG1Q9Y295 367 aaKnown RBP4.52□□□□□ -1.69
LSM6P2-201ENST00000552208 RNF114Q9Y508 228 aa4.52□□□□□ -1.69
LSM6P2-201ENST00000552208 PCDHB7Q9Y5E2 793 aa4.52□□□□□ -1.69
LSM6P2-201ENST00000552208 RSF1Q96T23 1441 aaPredicted RBP4.52□□□□□ -1.69
LSM6P2-201ENST00000552208 MYADML2A6NDP7 307 aa4.51□□□□□ -1.69
LSM6P2-201ENST00000552208 MBD3L5A6NJ08 208 aaPredicted RBP4.51□□□□□ -1.69
LSM6P2-201ENST00000552208 MARCH11A6NNE9 402 aa4.51□□□□□ -1.69
LSM6P2-201ENST00000552208 GRXCR1A8MXD5 290 aa4.51□□□□□ -1.69
LSM6P2-201ENST00000552208 F5H697 171 aa4.51□□□□□ -1.69
LSM6P2-201ENST00000552208 TRIAP1O43715 76 aa4.51□□□□□ -1.69
LSM6P2-201ENST00000552208 C1QTNF9P0C862 333 aa4.51□□□□□ -1.69
LSM6P2-201ENST00000552208 CPA1P15085 419 aa4.51□□□□□ -1.69
LSM6P2-201ENST00000552208 CD6P30203 668 aa4.51□□□□□ -1.69
LSM6P2-201ENST00000552208 MSX2P35548 267 aaPredicted RBP4.51□□□□□ -1.69
LSM6P2-201ENST00000552208 PGM1P36871 562 aa4.51□□□□□ -1.69
LSM6P2-201ENST00000552208 RBM6P78332 1123 aaKnown RBP4.51□□□□□ -1.69
LSM6P2-201ENST00000552208 SETQ01105 290 aaPredicted RBP4.51□□□□□ -1.69
LSM6P2-201ENST00000552208 TUBB3Q13509 450 aa4.51□□□□□ -1.69
LSM6P2-201ENST00000552208 GPR68Q15743 365 aa4.51□□□□□ -1.69
LSM6P2-201ENST00000552208 CYP2A13Q16696 494 aa4.51□□□□□ -1.69
LSM6P2-201ENST00000552208 AAK1Q2M2I8 961 aa4.51□□□□□ -1.69
LSM6P2-201ENST00000552208 CD300EQ496F6 205 aaPredicted RBP4.51□□□□□ -1.69
LSM6P2-201ENST00000552208 LRRC24Q50LG9 513 aa4.51□□□□□ -1.69
LSM6P2-201ENST00000552208 PDCD4Q53EL6 469 aaKnown RBP4.51□□□□□ -1.69
LSM6P2-201ENST00000552208 FAM133BQ5BKY9 247 aaKnown RBP4.51□□□□□ -1.69
LSM6P2-201ENST00000552208 LIPMQ5VYY2 423 aa4.51□□□□□ -1.69
LSM6P2-201ENST00000552208 SLFN13Q68D06 897 aa4.51□□□□□ -1.69
LSM6P2-201ENST00000552208 SLC9A4Q6AI14 798 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms