RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 ATP11CQ8NB49 1132 aa14.56□□□□□ -0.08
RAB3IP-216ENST00000552199 C3orf58Q8NDZ4 430 aa14.56□□□□□ -0.08
RAB3IP-216ENST00000552199 FBXO36Q8NEA4 188 aa14.56□□□□□ -0.08
RAB3IP-216ENST00000552199 NT5C3BQ969T7 300 aa14.56□□□□□ -0.08
RAB3IP-216ENST00000552199 SEC16BQ96JE7 1060 aa14.56□□□□□ -0.08
RAB3IP-216ENST00000552199 CSPG4P5Q96PW8 444 aa14.56□□□□□ -0.08
RAB3IP-216ENST00000552199 SYT15Q9BQS2 421 aa14.56□□□□□ -0.08
RAB3IP-216ENST00000552199 WDR83Q9BRX9 315 aaKnown RBP14.56□□□□□ -0.08
RAB3IP-216ENST00000552199 SLC24A2Q9UI40 661 aa14.56□□□□□ -0.08
RAB3IP-216ENST00000552199 RABGEF1Q9UJ41 708 aa14.56□□□□□ -0.08
RAB3IP-216ENST00000552199 FZD10Q9ULW2 581 aa14.56□□□□□ -0.08
RAB3IP-216ENST00000552199 CASP8AP2Q9UKL3 1982 aa14.56□□□□□ -0.08
RAB3IP-216ENST00000552199 MGEA5O60502 916 aa14.56□□□□□ -0.08
RAB3IP-216ENST00000552199 MYCNP04198 464 aaPredicted RBP14.56□□□□□ -0.08
RAB3IP-216ENST00000552199 TSHRP16473 764 aa14.56□□□□□ -0.08
RAB3IP-216ENST00000552199 IFNAR2P48551 515 aa14.56□□□□□ -0.08
RAB3IP-216ENST00000552199 NR2C2P49116 596 aa14.56□□□□□ -0.08
RAB3IP-216ENST00000552199 MAP3K7CLP57077 242 aa14.56□□□□□ -0.08
RAB3IP-216ENST00000552199 SLC10A2Q12908 348 aaPredicted RBP14.56□□□□□ -0.08
RAB3IP-216ENST00000552199 CBLBQ13191 982 aa14.56□□□□□ -0.08
RAB3IP-216ENST00000552199 XRCC4Q13426 336 aa14.56□□□□□ -0.08
RAB3IP-216ENST00000552199 DSC3Q14574 896 aa14.56□□□□□ -0.08
RAB3IP-216ENST00000552199 BBS9Q3SYG4 887 aa14.56□□□□□ -0.08
RAB3IP-216ENST00000552199 DCAF6Q58WW2 860 aa14.56□□□□□ -0.08
RAB3IP-216ENST00000552199 EFHC2Q5JST6 749 aa14.56□□□□□ -0.08
RAB3IP-216ENST00000552199 C6orf89Q6UWU4 347 aa14.56□□□□□ -0.08
RAB3IP-216ENST00000552199 BNIPLQ7Z465 357 aa14.56□□□□□ -0.08
RAB3IP-216ENST00000552199 TRABD2AQ86V40 505 aa14.56□□□□□ -0.08
RAB3IP-216ENST00000552199 PSTKQ8IV42 348 aaKnown RBP14.56□□□□□ -0.08
RAB3IP-216ENST00000552199 CDKL3Q8IVW4 592 aaPredicted RBP14.56□□□□□ -0.08
RAB3IP-216ENST00000552199 SIX6OS1Q8N1H7 587 aa14.56□□□□□ -0.08
RAB3IP-216ENST00000552199 HHIPL1Q96JK4 782 aa14.56□□□□□ -0.08
RAB3IP-216ENST00000552199 NPY6RQ99463 290 aa14.56□□□□□ -0.08
RAB3IP-216ENST00000552199 FETUBQ9UGM5 382 aa14.56□□□□□ -0.08
RAB3IP-216ENST00000552199 CDH9Q9ULB4 789 aa14.56□□□□□ -0.08
RAB3IP-216ENST00000552199 TIMM13Q9Y5L4 95 aaPredicted RBP14.56□□□□□ -0.08
RAB3IP-216ENST00000552199 PCNTO95613 3336 aa14.56□□□□□ -0.08
RAB3IP-216ENST00000552199 MYBPHLA2RUH7 354 aa14.55□□□□□ -0.08
RAB3IP-216ENST00000552199 CASTOR2A6NHX0 329 aa14.55□□□□□ -0.08
RAB3IP-216ENST00000552199 RASA4BC9J798 803 aa14.55□□□□□ -0.08
RAB3IP-216ENST00000552199 RASA4O43374 803 aa14.55□□□□□ -0.08
RAB3IP-216ENST00000552199 AP1G2O75843 785 aa14.55□□□□□ -0.08
RAB3IP-216ENST00000552199 TOMM70O94826 608 aa14.55□□□□□ -0.08
RAB3IP-216ENST00000552199 MAP3K6O95382 1288 aa14.55□□□□□ -0.08
RAB3IP-216ENST00000552199 GHRP10912 638 aa14.55□□□□□ -0.08
RAB3IP-216ENST00000552199 CST5P28325 142 aaPredicted RBP14.55□□□□□ -0.08
RAB3IP-216ENST00000552199 SSTR1P30872 391 aa14.55□□□□□ -0.08
RAB3IP-216ENST00000552199 RAB27AP51159 221 aa14.55□□□□□ -0.08
RAB3IP-216ENST00000552199 TKTL1P51854 596 aa14.55□□□□□ -0.08
RAB3IP-216ENST00000552199 CAP1Q01518 475 aa14.55□□□□□ -0.08
RAB3IP-216ENST00000552199 GBE1Q04446 702 aa14.55□□□□□ -0.08
RAB3IP-216ENST00000552199 UPP1Q16831 310 aa14.55□□□□□ -0.08
RAB3IP-216ENST00000552199 GKAP1Q5VSY0 366 aaPredicted RBP14.55□□□□□ -0.08
RAB3IP-216ENST00000552199 OTUD1Q5VV17 481 aaPredicted RBP14.55□□□□□ -0.08
RAB3IP-216ENST00000552199 PPP1R21Q6ZMI0 780 aa14.55□□□□□ -0.08
RAB3IP-216ENST00000552199 C3orf62Q6ZUJ4 267 aa14.55□□□□□ -0.08
RAB3IP-216ENST00000552199 FAM35AQ86V20 835 aa14.55□□□□□ -0.08
RAB3IP-216ENST00000552199 FAM131BQ86XD5 332 aa14.55□□□□□ -0.08
RAB3IP-216ENST00000552199 PALM2Q8IXS6 379 aa14.55□□□□□ -0.08
RAB3IP-216ENST00000552199 LRRC34Q8IZ02 419 aa14.55□□□□□ -0.08
RAB3IP-216ENST00000552199 ANKRD42Q8N9B4 389 aa14.55□□□□□ -0.08
RAB3IP-216ENST00000552199 MGARPQ8TDB4 240 aa14.55□□□□□ -0.08
RAB3IP-216ENST00000552199 SLC2A13Q96QE2 648 aa14.55□□□□□ -0.08
RAB3IP-216ENST00000552199 SMOQ99835 787 aa14.55□□□□□ -0.08
RAB3IP-216ENST00000552199 RAB6BQ9NRW1 208 aa14.55□□□□□ -0.08
RAB3IP-216ENST00000552199 KRT82Q9NSB4 513 aa14.55□□□□□ -0.08
RAB3IP-216ENST00000552199 RCOR3Q9P2K3 495 aaPredicted RBP14.55□□□□□ -0.08
RAB3IP-216ENST00000552199 USP3Q9Y6I4 520 aa14.55□□□□□ -0.08
RAB3IP-216ENST00000552199 FBXO21O94952 628 aa14.54□□□□□ -0.08
RAB3IP-216ENST00000552199 PITX1P78337 314 aaPredicted RBP14.54□□□□□ -0.08
RAB3IP-216ENST00000552199 LPIN1Q14693 890 aa14.54□□□□□ -0.08
RAB3IP-216ENST00000552199 LRRC14Q15048 493 aa14.54□□□□□ -0.08
RAB3IP-216ENST00000552199 SLC45A4Q5BKX6 768 aa14.54□□□□□ -0.08
RAB3IP-216ENST00000552199 C4orf22Q6V702 233 aa14.54□□□□□ -0.08
RAB3IP-216ENST00000552199 YTHDF3Q7Z739 585 aaKnown RBP14.54□□□□□ -0.08
RAB3IP-216ENST00000552199 CACNA2D3Q8IZS8 1091 aa14.54□□□□□ -0.08
RAB3IP-216ENST00000552199 PYROXD2Q8N2H3 581 aa14.54□□□□□ -0.08
RAB3IP-216ENST00000552199 DYDC1Q8WWB3 177 aa14.54□□□□□ -0.08
RAB3IP-216ENST00000552199 PAAF1Q9BRP4 392 aa14.54□□□□□ -0.08
RAB3IP-216ENST00000552199 FRMD8Q9BZ67 464 aaPredicted RBP14.54□□□□□ -0.08
RAB3IP-216ENST00000552199 PRDM16Q9HAZ2 1276 aa14.54□□□□□ -0.08
RAB3IP-216ENST00000552199 STAP1Q9ULZ2 295 aa14.54□□□□□ -0.08
RAB3IP-216ENST00000552199 PTCH2Q9Y6C5 1203 aa14.54□□□□□ -0.08
RAB3IP-216ENST00000552199 TSC2P49815 1807 aa14.54□□□□□ -0.08
RAB3IP-216ENST00000552199 A0A0U1RQF3 1178 aa14.54□□□□□ -0.08
RAB3IP-216ENST00000552199 TMEM88BA6NKF7 163 aa14.54□□□□□ -0.08
RAB3IP-216ENST00000552199 NRP1O14786 923 aa14.54□□□□□ -0.08
RAB3IP-216ENST00000552199 KIAA0754O94854 1291 aa14.54□□□□□ -0.08
RAB3IP-216ENST00000552199 PRKAR2AP13861 404 aaKnown RBP14.54□□□□□ -0.08
RAB3IP-216ENST00000552199 GOT1P17174 413 aa14.54□□□□□ -0.08
RAB3IP-216ENST00000552199 AMPD1P23109 780 aa14.54□□□□□ -0.08
RAB3IP-216ENST00000552199 ARL4AP40617 200 aa14.54□□□□□ -0.08
RAB3IP-216ENST00000552199 MAGEA6P43360 314 aa14.54□□□□□ -0.08
RAB3IP-216ENST00000552199 GEMIN4P57678 1058 aaKnown RBP14.54□□□□□ -0.08
RAB3IP-216ENST00000552199 PTK7Q13308 1070 aa14.54□□□□□ -0.08
RAB3IP-216ENST00000552199 PKN2Q16513 984 aaKnown RBP14.54□□□□□ -0.08
RAB3IP-216ENST00000552199 TIGD5Q53EQ6 642 aa14.54□□□□□ -0.08
RAB3IP-216ENST00000552199 SYPL2Q5VXT5 272 aa14.54□□□□□ -0.08
RAB3IP-216ENST00000552199 NCBP2-AS2Q69YL0 99 aa14.54□□□□□ -0.08
RAB3IP-216ENST00000552199 ARHGEF18Q6ZSZ5 1173 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms