RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 TCRBV7S3A2A0A539 114 aa11.97□□□□□ -0.49
RAB5C-208ENST00000551338 CFAP69A5D8W1 941 aa11.97□□□□□ -0.49
RAB5C-208ENST00000551338 SRRM3A6NNA2 597 aaPredicted RBP11.97□□□□□ -0.49
RAB5C-208ENST00000551338 C9IYK1 514 aa11.97□□□□□ -0.49
RAB5C-208ENST00000551338 E7ESA3 106 aa11.97□□□□□ -0.49
RAB5C-208ENST00000551338 M0QZQ0 153 aa11.97□□□□□ -0.49
RAB5C-208ENST00000551338 B4GALT3O60512 393 aa11.97□□□□□ -0.49
RAB5C-208ENST00000551338 FBXO21O94952 628 aa11.97□□□□□ -0.49
RAB5C-208ENST00000551338 PCSK1P29120 753 aa11.97□□□□□ -0.49
RAB5C-208ENST00000551338 MMP13P45452 471 aa11.97□□□□□ -0.49
RAB5C-208ENST00000551338 BCAR1P56945 870 aa11.97□□□□□ -0.49
RAB5C-208ENST00000551338 STAT4Q14765 748 aa11.97□□□□□ -0.49
RAB5C-208ENST00000551338 PPP6R3Q5H9R7 873 aaPredicted RBP11.97□□□□□ -0.49
RAB5C-208ENST00000551338 INTS6LQ5JSJ4 861 aaKnown RBP11.97□□□□□ -0.49
RAB5C-208ENST00000551338 SYPL2Q5VXT5 272 aa11.97□□□□□ -0.49
RAB5C-208ENST00000551338 LHX8Q68G74 356 aa11.97□□□□□ -0.49
RAB5C-208ENST00000551338 CENPUQ71F23 418 aa11.97□□□□□ -0.49
RAB5C-208ENST00000551338 BHLHA9Q7RTU4 235 aa11.97□□□□□ -0.49
RAB5C-208ENST00000551338 CTU1Q7Z7A3 348 aaKnown RBP11.97□□□□□ -0.49
RAB5C-208ENST00000551338 FAM131BQ86XD5 332 aa11.97□□□□□ -0.49
RAB5C-208ENST00000551338 CCDC13Q8IYE1 715 aa11.97□□□□□ -0.49
RAB5C-208ENST00000551338 SIX6OS1Q8N1H7 587 aa11.97□□□□□ -0.49
RAB5C-208ENST00000551338 GLT1D1Q96MS3 346 aa11.97□□□□□ -0.49
RAB5C-208ENST00000551338 UROC1Q96N76 676 aa11.97□□□□□ -0.49
RAB5C-208ENST00000551338 TTC25Q96NG3 672 aa11.97□□□□□ -0.49
RAB5C-208ENST00000551338 WDR83Q9BRX9 315 aaKnown RBP11.97□□□□□ -0.49
RAB5C-208ENST00000551338 RHOBTB2Q9BYZ6 727 aa11.97□□□□□ -0.49
RAB5C-208ENST00000551338 TRPV6Q9H1D0 765 aa11.97□□□□□ -0.49
RAB5C-208ENST00000551338 CNOT10Q9H9A5 744 aaKnown RBP11.97□□□□□ -0.49
RAB5C-208ENST00000551338 USP29Q9HBJ7 922 aa11.97□□□□□ -0.49
RAB5C-208ENST00000551338 UBN1Q9NPG3 1134 aa11.97□□□□□ -0.49
RAB5C-208ENST00000551338 RGS18Q9NS28 235 aa11.97□□□□□ -0.49
RAB5C-208ENST00000551338 TMLHEQ9NVH6 421 aa11.97□□□□□ -0.49
RAB5C-208ENST00000551338 CTNNAL1Q9UBT7 734 aa11.97□□□□□ -0.49
RAB5C-208ENST00000551338 LGALS13Q9UHV8 139 aa11.97□□□□□ -0.49
RAB5C-208ENST00000551338 STAP1Q9ULZ2 295 aa11.97□□□□□ -0.49
RAB5C-208ENST00000551338 TET1Q8NFU7 2136 aa11.96□□□□□ -0.49
RAB5C-208ENST00000551338 MYO18AQ92614 2054 aaKnown RBP11.96□□□□□ -0.49
RAB5C-208ENST00000551338 CLUHO75153 1309 aa11.96□□□□□ -0.49
RAB5C-208ENST00000551338 A0A087WUV0 522 aaPredicted RBP11.96□□□□□ -0.49
RAB5C-208ENST00000551338 BCLAF3A2AJT9 711 aaKnown RBP11.96□□□□□ -0.49
RAB5C-208ENST00000551338 SMAPO00193 183 aa11.96□□□□□ -0.49
RAB5C-208ENST00000551338 ALOX15BO15296 676 aa11.96□□□□□ -0.49
RAB5C-208ENST00000551338 BANF1O75531 89 aa11.96□□□□□ -0.49
RAB5C-208ENST00000551338 B3GAT3O94766 335 aa11.96□□□□□ -0.49
RAB5C-208ENST00000551338 MAP3K6O95382 1288 aa11.96□□□□□ -0.49
RAB5C-208ENST00000551338 ITGB1P05556 798 aa11.96□□□□□ -0.49
RAB5C-208ENST00000551338 FYNP06241 537 aa11.96□□□□□ -0.49
RAB5C-208ENST00000551338 IVLP07476 585 aa11.96□□□□□ -0.49
RAB5C-208ENST00000551338 PAX3P23760 479 aa11.96□□□□□ -0.49
RAB5C-208ENST00000551338 RBL1P28749 1068 aa11.96□□□□□ -0.49
RAB5C-208ENST00000551338 STIP1P31948 543 aaKnown RBP11.96□□□□□ -0.49
RAB5C-208ENST00000551338 RDXP35241 583 aaKnown RBP11.96□□□□□ -0.49
RAB5C-208ENST00000551338 YWHAZP63104 245 aaKnown RBP11.96□□□□□ -0.49
RAB5C-208ENST00000551338 PPARDQ03181 441 aa11.96□□□□□ -0.49
RAB5C-208ENST00000551338 PDIA2Q13087 525 aaKnown RBP11.96□□□□□ -0.49
RAB5C-208ENST00000551338 KCNJ11Q14654 390 aa11.96□□□□□ -0.49
RAB5C-208ENST00000551338 DCAF6Q58WW2 860 aa11.96□□□□□ -0.49
RAB5C-208ENST00000551338 NCBP2-AS2Q69YL0 99 aa11.96□□□□□ -0.49
RAB5C-208ENST00000551338 FAM171BQ6P995 826 aa11.96□□□□□ -0.49
RAB5C-208ENST00000551338 EXOC3L1Q86VI1 746 aa11.96□□□□□ -0.49
RAB5C-208ENST00000551338 METTL23Q86XA0 190 aa11.96□□□□□ -0.49
RAB5C-208ENST00000551338 CDKL3Q8IVW4 592 aaPredicted RBP11.96□□□□□ -0.49
RAB5C-208ENST00000551338 PYROXD2Q8N2H3 581 aa11.96□□□□□ -0.49
RAB5C-208ENST00000551338 TAB3Q8N5C8 712 aaPredicted RBP11.96□□□□□ -0.49
RAB5C-208ENST00000551338 OR10T2Q8NGX3 314 aa11.96□□□□□ -0.49
RAB5C-208ENST00000551338 MDM1Q8TC05 714 aa11.96□□□□□ -0.49
RAB5C-208ENST00000551338 HASPINQ8TF76 798 aa11.96□□□□□ -0.49
RAB5C-208ENST00000551338 RSPH1Q8WYR4 309 aa11.96□□□□□ -0.49
RAB5C-208ENST00000551338 SMARCD1Q96GM5 515 aa11.96□□□□□ -0.49
RAB5C-208ENST00000551338 SUSD3Q96L08 255 aa11.96□□□□□ -0.49
RAB5C-208ENST00000551338 CSPG4P5Q96PW8 444 aa11.96□□□□□ -0.49
RAB5C-208ENST00000551338 TMEM209Q96SK2 561 aa11.96□□□□□ -0.49
RAB5C-208ENST00000551338 SELENOSQ9BQE4 189 aa11.96□□□□□ -0.49
RAB5C-208ENST00000551338 STMN4Q9H169 189 aaPredicted RBP11.96□□□□□ -0.49
RAB5C-208ENST00000551338 RABEP2Q9H5N1 569 aa11.96□□□□□ -0.49
RAB5C-208ENST00000551338 CSNK1G1Q9HCP0 422 aa11.96□□□□□ -0.49
RAB5C-208ENST00000551338 CNGB3Q9NQW8 809 aa11.96□□□□□ -0.49
RAB5C-208ENST00000551338 CWC15Q9P013 229 aaKnown RBP11.96□□□□□ -0.49
RAB5C-208ENST00000551338 MFHAS1Q9Y4C4 1052 aa11.96□□□□□ -0.49
RAB5C-208ENST00000551338 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.96□□□□□ -0.49
RAB5C-208ENST00000551338 TTC3P53804 2025 aa11.96□□□□□ -0.5
RAB5C-208ENST00000551338 NUP205Q92621 2012 aa11.95□□□□□ -0.5
RAB5C-208ENST00000551338 YJEFN3A6XGL0 299 aa11.95□□□□□ -0.5
RAB5C-208ENST00000551338 E7ENQ6 273 aa11.95□□□□□ -0.5
RAB5C-208ENST00000551338 F8W810 466 aa11.95□□□□□ -0.5
RAB5C-208ENST00000551338 GOLGA8MH3BSY2 632 aa11.95□□□□□ -0.5
RAB5C-208ENST00000551338 M0QYT0 321 aa11.95□□□□□ -0.5
RAB5C-208ENST00000551338 KCNN4O15554 427 aa11.95□□□□□ -0.5
RAB5C-208ENST00000551338 ZBED1O96006 694 aa11.95□□□□□ -0.5
RAB5C-208ENST00000551338 GNRH1P01148 92 aa11.95□□□□□ -0.5
RAB5C-208ENST00000551338 CHN1P15882 459 aa11.95□□□□□ -0.5
RAB5C-208ENST00000551338 ZFXP17010 805 aaPredicted RBP11.95□□□□□ -0.5
RAB5C-208ENST00000551338 GOT1P17174 413 aa11.95□□□□□ -0.5
RAB5C-208ENST00000551338 AMPD1P23109 780 aa11.95□□□□□ -0.5
RAB5C-208ENST00000551338 YY1P25490 414 aa11.95□□□□□ -0.5
RAB5C-208ENST00000551338 GCAP28676 217 aa11.95□□□□□ -0.5
RAB5C-208ENST00000551338 ARL4CP56559 192 aa11.95□□□□□ -0.5
RAB5C-208ENST00000551338 BASP1P80723 227 aaKnown RBP11.95□□□□□ -0.5
RAB5C-208ENST00000551338 GBE1Q04446 702 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms