RNA–Protein interactions for RNA: ENST00000551297.6

TMEM116-214, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-214ENST00000551297 MAGEA11P43364 429 aa8.12□□□□□ -1.11
TMEM116-214ENST00000551297 HCAR3P49019 387 aa8.12□□□□□ -1.11
TMEM116-214ENST00000551297 CTCFP49711 727 aaPredicted RBP8.12□□□□□ -1.11
TMEM116-214ENST00000551297 MAP3K7CLP57077 242 aa8.12□□□□□ -1.11
TMEM116-214ENST00000551297 GNGT1P63211 74 aa8.12□□□□□ -1.11
TMEM116-214ENST00000551297 FAM189BP81408 668 aa8.12□□□□□ -1.11
TMEM116-214ENST00000551297 YWHAHQ04917 246 aaPredicted RBP8.12□□□□□ -1.11
TMEM116-214ENST00000551297 DSC1Q08554 894 aa8.12□□□□□ -1.11
TMEM116-214ENST00000551297 ADCY1Q08828 1119 aa8.12□□□□□ -1.11
TMEM116-214ENST00000551297 SLC29A2Q14542 456 aa8.12□□□□□ -1.11
TMEM116-214ENST00000551297 PDK1Q15118 436 aa8.12□□□□□ -1.11
TMEM116-214ENST00000551297 TIGD5Q53EQ6 642 aa8.12□□□□□ -1.11
TMEM116-214ENST00000551297 DCAF6Q58WW2 860 aa8.12□□□□□ -1.11
TMEM116-214ENST00000551297 SLC45A4Q5BKX6 768 aa8.12□□□□□ -1.11
TMEM116-214ENST00000551297 BRMS1LQ5PSV4 323 aa8.12□□□□□ -1.11
TMEM116-214ENST00000551297 HEATR6Q6AI08 1181 aaKnown RBP8.12□□□□□ -1.11
TMEM116-214ENST00000551297 ZNF280DQ6N043 979 aa8.12□□□□□ -1.11
TMEM116-214ENST00000551297 FAM171BQ6P995 826 aa8.12□□□□□ -1.11
TMEM116-214ENST00000551297 VSTM1Q6UX27 236 aa8.12□□□□□ -1.11
TMEM116-214ENST00000551297 MICALCLQ6ZW33 695 aa8.12□□□□□ -1.11
TMEM116-214ENST00000551297 CYP4V2Q6ZWL3 525 aaPredicted RBP8.12□□□□□ -1.11
TMEM116-214ENST00000551297 TDRPQ86YL5 185 aa8.12□□□□□ -1.11
TMEM116-214ENST00000551297 DEFB106AQ8N104 65 aa8.12□□□□□ -1.11
TMEM116-214ENST00000551297 VPS52Q8N1B4 723 aa8.12□□□□□ -1.11
TMEM116-214ENST00000551297 C2orf15Q8WU43 125 aaKnown RBP8.12□□□□□ -1.11
TMEM116-214ENST00000551297 PPP1R13LQ8WUF5 828 aa8.12□□□□□ -1.11
TMEM116-214ENST00000551297 PRCCQ92733 491 aaPredicted RBP8.12□□□□□ -1.11
TMEM116-214ENST00000551297 LPPQ93052 612 aa8.12□□□□□ -1.11
TMEM116-214ENST00000551297 NT5C3BQ969T7 300 aa8.12□□□□□ -1.11
TMEM116-214ENST00000551297 ARL8AQ96BM9 186 aa8.12□□□□□ -1.11
TMEM116-214ENST00000551297 CENPTQ96BT3 561 aa8.12□□□□□ -1.11
TMEM116-214ENST00000551297 PCED1BQ96HM7 432 aa8.12□□□□□ -1.11
TMEM116-214ENST00000551297 NPY6RQ99463 290 aa8.12□□□□□ -1.11
TMEM116-214ENST00000551297 TMEM175Q9BSA9 504 aa8.12□□□□□ -1.11
TMEM116-214ENST00000551297 TMEM121Q9BTD3 319 aa8.12□□□□□ -1.11
TMEM116-214ENST00000551297 COLEC11Q9BWP8 271 aa8.12□□□□□ -1.11
TMEM116-214ENST00000551297 B3GNT5Q9BYG0 378 aa8.12□□□□□ -1.11
TMEM116-214ENST00000551297 NSRP1Q9H0G5 558 aaKnown RBP8.12□□□□□ -1.11
TMEM116-214ENST00000551297 FBXO44Q9H4M3 255 aa8.12□□□□□ -1.11
TMEM116-214ENST00000551297 DHX35Q9H5Z1 703 aaKnown RBP8.12□□□□□ -1.11
TMEM116-214ENST00000551297 NRDE2Q9H7Z3 1164 aa8.12□□□□□ -1.11
TMEM116-214ENST00000551297 XAB2Q9HCS7 855 aaKnown RBP8.12□□□□□ -1.11
TMEM116-214ENST00000551297 CRTAC1Q9NQ79 661 aa8.12□□□□□ -1.11
TMEM116-214ENST00000551297 COMMD8Q9NX08 183 aa8.12□□□□□ -1.11
TMEM116-214ENST00000551297 BCCIPQ9P287 314 aaKnown RBP eCLIP8.12□□□□□ -1.11
TMEM116-214ENST00000551297 LGALS13Q9UHV8 139 aa8.12□□□□□ -1.11
TMEM116-214ENST00000551297 SLC24A2Q9UI40 661 aa8.12□□□□□ -1.11
TMEM116-214ENST00000551297 FZD10Q9ULW2 581 aa8.12□□□□□ -1.11
TMEM116-214ENST00000551297 NME7Q9Y5B8 376 aa8.12□□□□□ -1.11
TMEM116-214ENST00000551297 EXOC1LA0A1B0GW35 172 aa8.11□□□□□ -1.11
TMEM116-214ENST00000551297 E7EVH7 732 aa8.11□□□□□ -1.11
TMEM116-214ENST00000551297 H7C4K7 107 aa8.11□□□□□ -1.11
TMEM116-214ENST00000551297 AP3B1O00203 1094 aa8.11□□□□□ -1.11
TMEM116-214ENST00000551297 EEF2KO00418 725 aaKnown RBP8.11□□□□□ -1.11
TMEM116-214ENST00000551297 MGEA5O60502 916 aa8.11□□□□□ -1.11
TMEM116-214ENST00000551297 OPHN1O60890 802 aa8.11□□□□□ -1.11
TMEM116-214ENST00000551297 ACSL3O95573 720 aa8.11□□□□□ -1.11
TMEM116-214ENST00000551297 POMCP01189 267 aa8.11□□□□□ -1.11
TMEM116-214ENST00000551297 SLC2A3P11169 496 aa8.11□□□□□ -1.11
TMEM116-214ENST00000551297 PECAM1P16284 738 aaPredicted RBP8.11□□□□□ -1.11
TMEM116-214ENST00000551297 TPSB2P20231 275 aa8.11□□□□□ -1.11
TMEM116-214ENST00000551297 ACAT1P24752 427 aaKnown RBP8.11□□□□□ -1.11
TMEM116-214ENST00000551297 L1CAMP32004 1257 aa8.11□□□□□ -1.11
TMEM116-214ENST00000551297 GBP2P32456 591 aaPredicted RBP8.11□□□□□ -1.11
TMEM116-214ENST00000551297 STX2P32856 288 aa8.11□□□□□ -1.11
TMEM116-214ENST00000551297 MDH1P40925 334 aaKnown RBP8.11□□□□□ -1.11
TMEM116-214ENST00000551297 MAGEA6P43360 314 aa8.11□□□□□ -1.11
TMEM116-214ENST00000551297 MAGOHP61326 146 aaKnown RBP8.11□□□□□ -1.11
TMEM116-214ENST00000551297 BASP1P80723 227 aaKnown RBP8.11□□□□□ -1.11
TMEM116-214ENST00000551297 COG7P83436 770 aa8.11□□□□□ -1.11
TMEM116-214ENST00000551297 ZNF33AQ06730 810 aa8.11□□□□□ -1.11
TMEM116-214ENST00000551297 LLGL1Q15334 1064 aa8.11□□□□□ -1.11
TMEM116-214ENST00000551297 TRIP13Q15645 432 aaPredicted RBP8.11□□□□□ -1.11
TMEM116-214ENST00000551297 TPSAB1Q15661 275 aa8.11□□□□□ -1.11
TMEM116-214ENST00000551297 PPP6R3Q5H9R7 873 aaPredicted RBP8.11□□□□□ -1.11
TMEM116-214ENST00000551297 KCTD16Q68DU8 428 aa8.11□□□□□ -1.11
TMEM116-214ENST00000551297 LHX8Q68G74 356 aa8.11□□□□□ -1.11
TMEM116-214ENST00000551297 PM20D1Q6GTS8 502 aa8.11□□□□□ -1.11
TMEM116-214ENST00000551297 TRNP1Q6NT89 227 aa8.11□□□□□ -1.11
TMEM116-214ENST00000551297 ARHGEF18Q6ZSZ5 1173 aa8.11□□□□□ -1.11
TMEM116-214ENST00000551297 BNIPLQ7Z465 357 aa8.11□□□□□ -1.11
TMEM116-214ENST00000551297 ANKS1BQ7Z6G8 1248 aa8.11□□□□□ -1.11
TMEM116-214ENST00000551297 LRRC43Q8N309 656 aa8.11□□□□□ -1.11
TMEM116-214ENST00000551297 PLD5Q8N7P1 536 aa8.11□□□□□ -1.11
TMEM116-214ENST00000551297 MCUQ8NE86 351 aa8.11□□□□□ -1.11
TMEM116-214ENST00000551297 RNF139Q8WU17 664 aa8.11□□□□□ -1.11
TMEM116-214ENST00000551297 TFB1MQ8WVM0 346 aaKnown RBP8.11□□□□□ -1.11
TMEM116-214ENST00000551297 KHSRPQ92945 711 aaKnown RBP eCLIP8.11□□□□□ -1.118e-7■■□□□ 12.4
TMEM116-214ENST00000551297 ACSF2Q96CM8 615 aaPredicted RBP8.11□□□□□ -1.11
TMEM116-214ENST00000551297 PIWIL1Q96J94 861 aaKnown RBP8.11□□□□□ -1.11
TMEM116-214ENST00000551297 CSPG4P5Q96PW8 444 aa8.11□□□□□ -1.11
TMEM116-214ENST00000551297 CDK5RAP1Q96SZ6 601 aaKnown RBP8.11□□□□□ -1.11
TMEM116-214ENST00000551297 ULBP1Q9BZM6 244 aa8.11□□□□□ -1.11
TMEM116-214ENST00000551297 CXCL16Q9H2A7 254 aa8.11□□□□□ -1.11
TMEM116-214ENST00000551297 SEMA4AQ9H3S1 761 aa8.11□□□□□ -1.11
TMEM116-214ENST00000551297 SAYSD1Q9NPB0 183 aa8.11□□□□□ -1.11
TMEM116-214ENST00000551297 EIF2B3Q9NR50 452 aaKnown RBP8.11□□□□□ -1.11
TMEM116-214ENST00000551297 NINJ2Q9NZG7 142 aa8.11□□□□□ -1.11
TMEM116-214ENST00000551297 FNIP2Q9P278 1114 aa8.11□□□□□ -1.11
TMEM116-214ENST00000551297 STK39Q9UEW8 545 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms