RNA–Protein interactions for RNA: ENST00000551242.5

ERBB3-219, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,755 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-219ENST00000551242 ST6GALNAC4Q9H4F1 302 aa12.66□□□□□ -0.38
ERBB3-219ENST00000551242 ZNF696Q9H7X3 374 aa12.66□□□□□ -0.38
ERBB3-219ENST00000551242 PLAC1Q9HBJ0 212 aa12.66□□□□□ -0.38
ERBB3-219ENST00000551242 HOMER2Q9NSB8 354 aa12.66□□□□□ -0.38
ERBB3-219ENST00000551242 TUBGCP4Q9UGJ1 667 aa12.66□□□□□ -0.38
ERBB3-219ENST00000551242 ZC3H7BQ9UGR2 993 aaKnown RBP12.66□□□□□ -0.38
ERBB3-219ENST00000551242 PCSK1NQ9UHG2 260 aa12.66□□□□□ -0.38
ERBB3-219ENST00000551242 SORCS3Q9UPU3 1222 aa12.66□□□□□ -0.38
ERBB3-219ENST00000551242 VNN1O95497 513 aa12.66□□□□□ -0.38
ERBB3-219ENST00000551242 TFPTP0C1Z6 253 aa12.66□□□□□ -0.38
ERBB3-219ENST00000551242 FAM58BPP0C7Q3 252 aa12.66□□□□□ -0.38
ERBB3-219ENST00000551242 PTPN7P35236 360 aa12.66□□□□□ -0.38
ERBB3-219ENST00000551242 QARSP47897 775 aaKnown RBP12.66□□□□□ -0.38
ERBB3-219ENST00000551242 IDH3AP50213 366 aa12.66□□□□□ -0.38
ERBB3-219ENST00000551242 CCR3P51677 355 aa12.66□□□□□ -0.38
ERBB3-219ENST00000551242 PDPK2PQ6A1A2 396 aa12.66□□□□□ -0.38
ERBB3-219ENST00000551242 TRMT10BQ6PF06 316 aaKnown RBP12.66□□□□□ -0.38
ERBB3-219ENST00000551242 C15orf39Q6ZRI6 1047 aa12.66□□□□□ -0.38
ERBB3-219ENST00000551242 USP37Q86T82 979 aa12.66□□□□□ -0.38
ERBB3-219ENST00000551242 RFX6Q8HWS3 928 aa12.66□□□□□ -0.38
ERBB3-219ENST00000551242 GPD1LQ8N335 351 aa12.66□□□□□ -0.38
ERBB3-219ENST00000551242 LRRN4Q8WUT4 740 aa12.66□□□□□ -0.38
ERBB3-219ENST00000551242 ZNF512Q96ME7 567 aaPredicted RBP12.66□□□□□ -0.38
ERBB3-219ENST00000551242 PCDH18Q9HCL0 1135 aa12.66□□□□□ -0.38
ERBB3-219ENST00000551242 PFDN4Q9NQP4 134 aa12.66□□□□□ -0.38
ERBB3-219ENST00000551242 KMT5AQ9NQR1 393 aa12.66□□□□□ -0.38
ERBB3-219ENST00000551242 MAN1C1Q9NR34 630 aa12.66□□□□□ -0.38
ERBB3-219ENST00000551242 SLC9A2Q9UBY0 812 aa12.66□□□□□ -0.38
ERBB3-219ENST00000551242 ZNF536O15090 1300 aa12.66□□□□□ -0.38
ERBB3-219ENST00000551242 ASTN2O75129 1339 aaPredicted RBP12.66□□□□□ -0.38
ERBB3-219ENST00000551242 XPO1O14980 1071 aaKnown RBP12.65□□□□□ -0.38
ERBB3-219ENST00000551242 TBC1D12O60347 775 aa12.65□□□□□ -0.38
ERBB3-219ENST00000551242 OATP04181 439 aa12.65□□□□□ -0.38
ERBB3-219ENST00000551242 PDGFRBP09619 1106 aa12.65□□□□□ -0.38
ERBB3-219ENST00000551242 ALDH1B1P30837 517 aa12.65□□□□□ -0.38
ERBB3-219ENST00000551242 SLC1A6P48664 564 aa12.65□□□□□ -0.38
ERBB3-219ENST00000551242 ACOT2P49753 483 aa12.65□□□□□ -0.38
ERBB3-219ENST00000551242 ENTPD1P49961 510 aa12.65□□□□□ -0.38
ERBB3-219ENST00000551242 NR1H2P55055 460 aa12.65□□□□□ -0.38
ERBB3-219ENST00000551242 MTTPP55157 894 aa12.65□□□□□ -0.38
ERBB3-219ENST00000551242 SNRPFP62306 86 aaKnown RBP12.65□□□□□ -0.38
ERBB3-219ENST00000551242 YWHAZP63104 245 aaKnown RBP12.65□□□□□ -0.38
ERBB3-219ENST00000551242 TRAPPC3LQ5T215 181 aa12.65□□□□□ -0.38
ERBB3-219ENST00000551242 BBS12Q6ZW61 710 aa12.65□□□□□ -0.38
ERBB3-219ENST00000551242 LILRA2Q8N149 483 aa12.65□□□□□ -0.38
ERBB3-219ENST00000551242 ARFGAP1Q8N6T3 406 aa12.65□□□□□ -0.38
ERBB3-219ENST00000551242 RNF148Q8N7C7 305 aa12.65□□□□□ -0.38
ERBB3-219ENST00000551242 IL31RAQ8NI17 732 aa12.65□□□□□ -0.38
ERBB3-219ENST00000551242 SPATA18Q8TC71 538 aa12.65□□□□□ -0.38
ERBB3-219ENST00000551242 FAF2Q96CS3 445 aa12.65□□□□□ -0.38
ERBB3-219ENST00000551242 DDX56Q9NY93 547 aaKnown RBP12.65□□□□□ -0.38
ERBB3-219ENST00000551242 FOXD2O60548 495 aaPredicted RBP12.65□□□□□ -0.38
ERBB3-219ENST00000551242 ZC3H11AO75152 810 aaKnown RBP eCLIP12.65□□□□□ -0.38
ERBB3-219ENST00000551242 GSRP00390 522 aa12.65□□□□□ -0.38
ERBB3-219ENST00000551242 GH2P01242 217 aa12.65□□□□□ -0.38
ERBB3-219ENST00000551242 TSHRP16473 764 aa12.65□□□□□ -0.38
ERBB3-219ENST00000551242 ARRB2P32121 409 aa12.65□□□□□ -0.38
ERBB3-219ENST00000551242 CD97P48960 835 aa12.65□□□□□ -0.38
ERBB3-219ENST00000551242 CDK18Q07002 472 aa12.65□□□□□ -0.38
ERBB3-219ENST00000551242 DMP1Q13316 513 aaPredicted RBP12.65□□□□□ -0.38
ERBB3-219ENST00000551242 RARS2Q5T160 578 aaKnown RBP12.65□□□□□ -0.38
ERBB3-219ENST00000551242 LRRC43Q8N309 656 aa12.65□□□□□ -0.38
ERBB3-219ENST00000551242 SMYD1Q8NB12 490 aa12.65□□□□□ -0.38
ERBB3-219ENST00000551242 GMCL1P1Q8NEA9 526 aa12.65□□□□□ -0.38
ERBB3-219ENST00000551242 CMTM5Q96DZ9 223 aa12.65□□□□□ -0.38
ERBB3-219ENST00000551242 MAML3Q96JK9 1138 aa12.65□□□□□ -0.38
ERBB3-219ENST00000551242 RIT2Q99578 217 aa12.65□□□□□ -0.38
ERBB3-219ENST00000551242 NRDE2Q9H7Z3 1164 aa12.65□□□□□ -0.38
ERBB3-219ENST00000551242 RAB6BQ9NRW1 208 aa12.65□□□□□ -0.38
ERBB3-219ENST00000551242 FAIMQ9NVQ4 179 aa12.65□□□□□ -0.38
ERBB3-219ENST00000551242 PLK2Q9NYY3 685 aa12.65□□□□□ -0.38
ERBB3-219ENST00000551242 C6orf203Q9P0P8 240 aaPredicted RBP12.65□□□□□ -0.38
ERBB3-219ENST00000551242 HERC5Q9UII4 1024 aaKnown RBP12.65□□□□□ -0.38
ERBB3-219ENST00000551242 RAB26Q9ULW5 256 aa12.65□□□□□ -0.38
ERBB3-219ENST00000551242 NUB1Q9Y5A7 615 aa12.65□□□□□ -0.38
ERBB3-219ENST00000551242 TCRBV5S1A1TA0A578 114 aa12.64□□□□□ -0.39
ERBB3-219ENST00000551242 E9PBE3 544 aa12.64□□□□□ -0.39
ERBB3-219ENST00000551242 DHX15O43143 795 aaKnown RBP12.64□□□□□ -0.39
ERBB3-219ENST00000551242 THRAP10827 490 aa12.64□□□□□ -0.39
ERBB3-219ENST00000551242 PSMA2P25787 234 aa12.64□□□□□ -0.39
ERBB3-219ENST00000551242 RFC1P35251 1148 aaPredicted RBP12.64□□□□□ -0.39
ERBB3-219ENST00000551242 GMPRP36959 345 aa12.64□□□□□ -0.39
ERBB3-219ENST00000551242 PSMD7P51665 324 aa12.64□□□□□ -0.39
ERBB3-219ENST00000551242 MCCD1P59942 119 aaPredicted RBP12.64□□□□□ -0.39
ERBB3-219ENST00000551242 NAA20P61599 178 aa12.64□□□□□ -0.39
ERBB3-219ENST00000551242 KCNJ11Q14654 390 aa12.64□□□□□ -0.39
ERBB3-219ENST00000551242 C16orf72Q14CZ0 275 aa12.64□□□□□ -0.39
ERBB3-219ENST00000551242 SMAD1Q15797 465 aaKnown RBP12.64□□□□□ -0.39
ERBB3-219ENST00000551242 ABCB5Q2M3G0 1257 aa12.64□□□□□ -0.39
ERBB3-219ENST00000551242 ZACNQ401N2 412 aa12.64□□□□□ -0.39
ERBB3-219ENST00000551242 ANKDD1AQ495B1 522 aa12.64□□□□□ -0.39
ERBB3-219ENST00000551242 LGSNQ5TDP6 509 aa12.64□□□□□ -0.39
ERBB3-219ENST00000551242 MBLAC2Q68D91 279 aa12.64□□□□□ -0.39
ERBB3-219ENST00000551242 DARS2Q6PI48 645 aaKnown RBP12.64□□□□□ -0.39
ERBB3-219ENST00000551242 NCCRP1Q6ZVX7 275 aaPredicted RBP12.64□□□□□ -0.39
ERBB3-219ENST00000551242 SH3BP5LQ7L8J4 393 aa12.64□□□□□ -0.39
ERBB3-219ENST00000551242 KIAA0319LQ8IZA0 1049 aa12.64□□□□□ -0.39
ERBB3-219ENST00000551242 BBS5Q8N3I7 341 aa12.64□□□□□ -0.39
ERBB3-219ENST00000551242 RAB3IL1Q8TBN0 382 aa12.64□□□□□ -0.39
ERBB3-219ENST00000551242 PPP1R14BQ96C90 147 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms