RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 P4HA2O15460 535 aa14.14□□□□□ -0.15
NUP188-211ENST00000550219 TLR5O60602 858 aa14.14□□□□□ -0.15
NUP188-211ENST00000550219 KAT7O95251 611 aa14.14□□□□□ -0.15
NUP188-211ENST00000550219 ASS1P00966 412 aaKnown RBP14.14□□□□□ -0.15
NUP188-211ENST00000550219 AFPP02771 609 aaKnown RBP14.14□□□□□ -0.15
NUP188-211ENST00000550219 FAM200BP0CF97 657 aa14.14□□□□□ -0.15
NUP188-211ENST00000550219 CD58P19256 250 aa14.14□□□□□ -0.15
NUP188-211ENST00000550219 TRIM21P19474 475 aaKnown RBP14.14□□□□□ -0.15
NUP188-211ENST00000550219 BCKDHBP21953 392 aa14.14□□□□□ -0.15
NUP188-211ENST00000550219 GCLMP48507 274 aa14.14□□□□□ -0.15
NUP188-211ENST00000550219 FMO5P49326 533 aa14.14□□□□□ -0.15
NUP188-211ENST00000550219 MRPS21P82921 87 aaKnown RBP14.14□□□□□ -0.15
NUP188-211ENST00000550219 CRY1Q16526 586 aa14.14□□□□□ -0.15
NUP188-211ENST00000550219 ANO4Q32M45 955 aa14.14□□□□□ -0.15
NUP188-211ENST00000550219 USP39Q53GS9 565 aaKnown RBP14.14□□□□□ -0.15
NUP188-211ENST00000550219 DCAF17Q5H9S7 520 aaPredicted RBP14.14□□□□□ -0.15
NUP188-211ENST00000550219 PLA2G2CQ5R387 149 aa14.14□□□□□ -0.15
NUP188-211ENST00000550219 STPG1Q5TH74 334 aa14.14□□□□□ -0.15
NUP188-211ENST00000550219 TCERG1LQ5VWI1 586 aa14.14□□□□□ -0.15
NUP188-211ENST00000550219 BTBD8Q5XKL5 378 aa14.14□□□□□ -0.15
NUP188-211ENST00000550219 TMEM92Q6UXU6 159 aa14.14□□□□□ -0.15
NUP188-211ENST00000550219 GPRIN1Q7Z2K8 1008 aa14.14□□□□□ -0.15
NUP188-211ENST00000550219 CREBRFQ8IUR6 639 aa14.14□□□□□ -0.15
NUP188-211ENST00000550219 TAF4BQ92750 862 aa14.14□□□□□ -0.15
NUP188-211ENST00000550219 WBP2Q969T9 261 aa14.14□□□□□ -0.15
NUP188-211ENST00000550219 NAP1L5Q96NT1 182 aaPredicted RBP14.14□□□□□ -0.15
NUP188-211ENST00000550219 TWNKQ96RR1 684 aa14.14□□□□□ -0.15
NUP188-211ENST00000550219 EDEM2Q9BV94 578 aa14.14□□□□□ -0.15
NUP188-211ENST00000550219 RTN4Q9NQC3 1192 aaKnown RBP14.14□□□□□ -0.15
NUP188-211ENST00000550219 VPS45Q9NRW7 570 aa14.14□□□□□ -0.15
NUP188-211ENST00000550219 COQ4Q9Y3A0 265 aa14.14□□□□□ -0.15
NUP188-211ENST00000550219 GTPBP10A4D1E9 387 aaKnown RBP14.13□□□□□ -0.15
NUP188-211ENST00000550219 LGALS16A8MUM7 142 aa14.13□□□□□ -0.15
NUP188-211ENST00000550219 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.13□□□□□ -0.15
NUP188-211ENST00000550219 SGK1O00141 431 aa14.13□□□□□ -0.15
NUP188-211ENST00000550219 CYP26A1O43174 497 aa14.13□□□□□ -0.15
NUP188-211ENST00000550219 AP5Z1O43299 807 aa14.13□□□□□ -0.15
NUP188-211ENST00000550219 ALDH1A2O94788 518 aa14.13□□□□□ -0.15
NUP188-211ENST00000550219 HNRNPLP14866 589 aaKnown RBP eCLIP14.13□□□□□ -0.15
NUP188-211ENST00000550219 EIF2DP41214 584 aaKnown RBP14.13□□□□□ -0.15
NUP188-211ENST00000550219 DHPSP49366 369 aaPredicted RBP14.13□□□□□ -0.15
NUP188-211ENST00000550219 PGFP49763 221 aa14.13□□□□□ -0.15
NUP188-211ENST00000550219 TUBP50607 506 aa14.13□□□□□ -0.15
NUP188-211ENST00000550219 GAD2Q05329 585 aa14.13□□□□□ -0.15
NUP188-211ENST00000550219 NR1I3Q14994 352 aa14.13□□□□□ -0.15
NUP188-211ENST00000550219 CBWD6Q4V339 395 aa14.13□□□□□ -0.15
NUP188-211ENST00000550219 CBWD3Q5JTY5 395 aa14.13□□□□□ -0.15
NUP188-211ENST00000550219 CBWD5Q5RIA9 395 aa14.13□□□□□ -0.15
NUP188-211ENST00000550219 EMC10Q5UCC4 262 aa14.13□□□□□ -0.15
NUP188-211ENST00000550219 RNF43Q68DV7 783 aa14.13□□□□□ -0.15
NUP188-211ENST00000550219 KRT39Q6A163 491 aa14.13□□□□□ -0.15
NUP188-211ENST00000550219 ARMCX6Q7L4S7 300 aa14.13□□□□□ -0.15
NUP188-211ENST00000550219 CYP2U1Q7Z449 544 aa14.13□□□□□ -0.15
NUP188-211ENST00000550219 UNC93AQ86WB7 457 aa14.13□□□□□ -0.15
NUP188-211ENST00000550219 PGBD3Q8N328 593 aa14.13□□□□□ -0.15
NUP188-211ENST00000550219 KIAA1958Q8N8K9 716 aa14.13□□□□□ -0.15
NUP188-211ENST00000550219 IL17RCQ8NAC3 791 aa14.13□□□□□ -0.15
NUP188-211ENST00000550219 TAS1R2Q8TE23 839 aa14.13□□□□□ -0.15
NUP188-211ENST00000550219 VPS16Q9H269 839 aa14.13□□□□□ -0.15
NUP188-211ENST00000550219 TLR8Q9NR97 1041 aaKnown RBP14.13□□□□□ -0.15
NUP188-211ENST00000550219 TCRBV21S2A2A0A5A6 115 aa14.12□□□□□ -0.15
NUP188-211ENST00000550219 GOLGA6L3A6NEY3 463 aa14.12□□□□□ -0.15
NUP188-211ENST00000550219 MDM4O15151 490 aa14.12□□□□□ -0.15
NUP188-211ENST00000550219 SERPINC1P01008 464 aa14.12□□□□□ -0.15
NUP188-211ENST00000550219 TPM2P07951 284 aa14.12□□□□□ -0.15
NUP188-211ENST00000550219 GRIA2P42262 883 aa14.12□□□□□ -0.15
NUP188-211ENST00000550219 MXI1P50539 228 aa14.12□□□□□ -0.15
NUP188-211ENST00000550219 LIMK1P53667 647 aa14.12□□□□□ -0.15
NUP188-211ENST00000550219 UBASH3AP57075 661 aa14.12□□□□□ -0.15
NUP188-211ENST00000550219 GSE1Q14687 1217 aa14.12□□□□□ -0.15
NUP188-211ENST00000550219 EOGTQ5NDL2 527 aa14.12□□□□□ -0.15
NUP188-211ENST00000550219 C10orf76Q5T2E6 689 aa14.12□□□□□ -0.15
NUP188-211ENST00000550219 PMS2CLQ68D20 193 aa14.12□□□□□ -0.15
NUP188-211ENST00000550219 CLEC20AQ6ZU45 233 aa14.12□□□□□ -0.15
NUP188-211ENST00000550219 RASSF3Q86WH2 238 aa14.12□□□□□ -0.15
NUP188-211ENST00000550219 HMGB4Q8WW32 186 aa14.12□□□□□ -0.15
NUP188-211ENST00000550219 RLN3Q8WXF3 142 aa14.12□□□□□ -0.15
NUP188-211ENST00000550219 DDX1Q92499 740 aaKnown RBP14.12□□□□□ -0.15
NUP188-211ENST00000550219 OTUB2Q96DC9 234 aa14.12□□□□□ -0.15
NUP188-211ENST00000550219 SPACA7Q96KW9 195 aa14.12□□□□□ -0.15
NUP188-211ENST00000550219 NIF3L1Q9GZT8 377 aa14.12□□□□□ -0.15
NUP188-211ENST00000550219 FBXO44Q9H4M3 255 aa14.12□□□□□ -0.15
NUP188-211ENST00000550219 APOBEC3GQ9HC16 384 aaKnown RBP14.12□□□□□ -0.15
NUP188-211ENST00000550219 POLMQ9NP87 494 aaPredicted RBP14.12□□□□□ -0.15
NUP188-211ENST00000550219 SPHK2Q9NRA0 654 aa14.12□□□□□ -0.15
NUP188-211ENST00000550219 COMMD8Q9NX08 183 aa14.12□□□□□ -0.15
NUP188-211ENST00000550219 IL37Q9NZH6 218 aa14.12□□□□□ -0.15
NUP188-211ENST00000550219 NCOR2Q9Y618 2525 aa14.12□□□□□ -0.15
NUP188-211ENST00000550219 FAM92AA1XBS5 289 aa14.11□□□□□ -0.15
NUP188-211ENST00000550219 BCLAF3A2AJT9 711 aaKnown RBP14.11□□□□□ -0.15
NUP188-211ENST00000550219 TBC1D3BA6NDS4 549 aa14.11□□□□□ -0.15
NUP188-211ENST00000550219 NEDD8-MDP1E9PL57 170 aa14.11□□□□□ -0.15
NUP188-211ENST00000550219 HOXC11O43248 304 aaPredicted RBP14.11□□□□□ -0.15
NUP188-211ENST00000550219 TULP3O75386 442 aa14.11□□□□□ -0.15
NUP188-211ENST00000550219 TBX18O95935 607 aa14.11□□□□□ -0.15
NUP188-211ENST00000550219 ZDHHC11BP0C7U3 371 aa14.11□□□□□ -0.15
NUP188-211ENST00000550219 ACO1P21399 889 aaKnown RBP14.11□□□□□ -0.15
NUP188-211ENST00000550219 WASP42768 502 aa14.11□□□□□ -0.15
NUP188-211ENST00000550219 GOLGA8FQ08AF8 430 aa14.11□□□□□ -0.15
NUP188-211ENST00000550219 GOLGA8DPQ0D2H9 430 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms