RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 CYP11B1P15538 503 aa27.17■■□□□ 1.94
CPSF6-205ENST00000550075 GJA4P35212 333 aa27.17■■□□□ 1.94
CPSF6-205ENST00000550075 TXNDC11Q6PKC3 985 aa27.17■■□□□ 1.94
CPSF6-205ENST00000550075 HTR3DQ70Z44 454 aa27.17■■□□□ 1.94
CPSF6-205ENST00000550075 CLDN23Q96B33 292 aa27.17■■□□□ 1.94
CPSF6-205ENST00000550075 DCLK3Q9C098 648 aa27.17■■□□□ 1.94
CPSF6-205ENST00000550075 IRF2BPLQ9H1B7 796 aa27.17■■□□□ 1.94
CPSF6-205ENST00000550075 RTN4Q9NQC3 1192 aaKnown RBP27.17■■□□□ 1.94
CPSF6-205ENST00000550075 DLGAP2Q9P1A6 1054 aa27.17■■□□□ 1.94
CPSF6-205ENST00000550075 OTOL1A6NHN0 477 aaPredicted RBP27.16■■□□□ 1.94
CPSF6-205ENST00000550075 SERPINC1P01008 464 aa27.16■■□□□ 1.94
CPSF6-205ENST00000550075 CYP17A1P05093 508 aa27.16■■□□□ 1.94
CPSF6-205ENST00000550075 STAT1P42224 750 aa27.16■■□□□ 1.94
CPSF6-205ENST00000550075 PTPN5P54829 565 aa27.16■■□□□ 1.94
CPSF6-205ENST00000550075 PON2Q15165 354 aa27.16■■□□□ 1.94
CPSF6-205ENST00000550075 DGKKQ5KSL6 1271 aa27.16■■□□□ 1.94
CPSF6-205ENST00000550075 LUZP1Q86V48 1076 aa27.16■■□□□ 1.94
CPSF6-205ENST00000550075 IPO4Q8TEX9 1081 aaKnown RBP27.16■■□□□ 1.94
CPSF6-205ENST00000550075 FAM149B1Q96BN6 582 aa27.16■■□□□ 1.94
CPSF6-205ENST00000550075 ZNF510Q9Y2H8 683 aa27.16■■□□□ 1.94
CPSF6-205ENST00000550075 E5RJQ4 531 aa27.15■■□□□ 1.94
CPSF6-205ENST00000550075 GABBR2O75899 941 aa27.15■■□□□ 1.94
CPSF6-205ENST00000550075 SOX5P35711 763 aa27.15■■□□□ 1.94
CPSF6-205ENST00000550075 JAM2P57087 298 aa27.15■■□□□ 1.94
CPSF6-205ENST00000550075 GRSF1Q12849 480 aaKnown RBP eCLIP27.15■■□□□ 1.94
CPSF6-205ENST00000550075 DHCR24Q15392 516 aa27.15■■□□□ 1.94
CPSF6-205ENST00000550075 NFKBIBQ15653 356 aa27.15■■□□□ 1.94
CPSF6-205ENST00000550075 CACNA2D4Q7Z3S7 1137 aa27.15■■□□□ 1.94
CPSF6-205ENST00000550075 TMEM110Q86TL2 294 aa27.15■■□□□ 1.94
CPSF6-205ENST00000550075 ZNF677Q86XU0 584 aa27.15■■□□□ 1.94
CPSF6-205ENST00000550075 BBS7Q8IWZ6 715 aa27.15■■□□□ 1.94
CPSF6-205ENST00000550075 TMEM35BQ8NCS4 154 aa27.15■■□□□ 1.94
CPSF6-205ENST00000550075 EDEM1Q92611 657 aa27.15■■□□□ 1.94
CPSF6-205ENST00000550075 PLD4Q96BZ4 506 aa27.15■■□□□ 1.94
CPSF6-205ENST00000550075 PPP1R13BQ96KQ4 1090 aa27.15■■□□□ 1.94
CPSF6-205ENST00000550075 P2RY13Q9BPV8 354 aa27.15■■□□□ 1.94
CPSF6-205ENST00000550075 SYNCQ9H7C4 482 aa27.15■■□□□ 1.94
CPSF6-205ENST00000550075 CYTH4Q9UIA0 394 aa27.15■■□□□ 1.94
CPSF6-205ENST00000550075 HBS1LQ9Y450 684 aaKnown RBP27.15■■□□□ 1.94
CPSF6-205ENST00000550075 SLC12A8A0AV02 714 aa27.14■■□□□ 1.94
CPSF6-205ENST00000550075 TRDMT1O14717 391 aaKnown RBP27.14■■□□□ 1.94
CPSF6-205ENST00000550075 EPHB6O15197 1021 aa27.14■■□□□ 1.94
CPSF6-205ENST00000550075 STC2O76061 302 aa27.14■■□□□ 1.94
CPSF6-205ENST00000550075 GFPT2O94808 682 aa27.14■■□□□ 1.94
CPSF6-205ENST00000550075 ADH5P11766 374 aa27.14■■□□□ 1.94
CPSF6-205ENST00000550075 MSANTD2Q6P1R3 559 aa27.14■■□□□ 1.94
CPSF6-205ENST00000550075 FMNL3Q8IVF7 1028 aa27.14■■□□□ 1.94
CPSF6-205ENST00000550075 ADGRG2Q8IZP9 1017 aa27.14■■□□□ 1.94
CPSF6-205ENST00000550075 ZNF687Q8N1G0 1237 aa27.14■■□□□ 1.94
CPSF6-205ENST00000550075 MSANTD4Q8NCY6 345 aa27.14■■□□□ 1.94
CPSF6-205ENST00000550075 C1orf131Q8NDD1 294 aaKnown RBP27.14■■□□□ 1.94
CPSF6-205ENST00000550075 PRSS33Q8NF86 280 aa27.14■■□□□ 1.94
CPSF6-205ENST00000550075 EPS8L1Q8TE68 723 aa27.14■■□□□ 1.94
CPSF6-205ENST00000550075 CLEC4CQ8WTT0 213 aa27.14■■□□□ 1.94
CPSF6-205ENST00000550075 LMAN1LQ9HAT1 526 aa27.14■■□□□ 1.94
CPSF6-205ENST00000550075 RAPGEFL1Q9UHV5 662 aa27.14■■□□□ 1.94
CPSF6-205ENST00000550075 LSM8O95777 96 aaKnown RBP27.13■■□□□ 1.93
CPSF6-205ENST00000550075 TMEM196Q5HYL7 178 aa27.13■■□□□ 1.93
CPSF6-205ENST00000550075 SCUBE3Q8IX30 993 aa27.13■■□□□ 1.93
CPSF6-205ENST00000550075 SYNPOQ8N3V7 929 aa27.13■■□□□ 1.93
CPSF6-205ENST00000550075 CD101Q93033 1021 aa27.13■■□□□ 1.93
CPSF6-205ENST00000550075 CHRDQ9H2X0 955 aa27.13■■□□□ 1.93
CPSF6-205ENST00000550075 A0A1B0GTH6 734 aa27.12■■□□□ 1.93
CPSF6-205ENST00000550075 PAPSS1O43252 624 aaPredicted RBP27.12■■□□□ 1.93
CPSF6-205ENST00000550075 HMBSP08397 361 aa27.12■■□□□ 1.93
CPSF6-205ENST00000550075 CHRNB1P11230 501 aa27.12■■□□□ 1.93
CPSF6-205ENST00000550075 DRD1P21728 446 aa27.12■■□□□ 1.93
CPSF6-205ENST00000550075 GAD2Q05329 585 aa27.12■■□□□ 1.93
CPSF6-205ENST00000550075 LY6G5CQ5SRR4 150 aa27.12■■□□□ 1.93
CPSF6-205ENST00000550075 TAF3Q5VWG9 929 aa27.12■■□□□ 1.93
CPSF6-205ENST00000550075 BEND5Q7L4P6 421 aa27.12■■□□□ 1.93
CPSF6-205ENST00000550075 WBP2Q969T9 261 aa27.12■■□□□ 1.93
CPSF6-205ENST00000550075 CPXM1Q96SM3 734 aa27.12■■□□□ 1.93
CPSF6-205ENST00000550075 SPHK2Q9NRA0 654 aa27.12■■□□□ 1.93
CPSF6-205ENST00000550075 SPATA6Q9NWH7 488 aaPredicted RBP27.12■■□□□ 1.93
CPSF6-205ENST00000550075 A0A1W2PQC6 194 aa27.11■■□□□ 1.93
CPSF6-205ENST00000550075 TEX33O43247 280 aa27.11■■□□□ 1.93
CPSF6-205ENST00000550075 GREM1O60565 184 aa27.11■■□□□ 1.93
CPSF6-205ENST00000550075 CORO1AP31146 461 aaKnown RBP27.11■■□□□ 1.93
CPSF6-205ENST00000550075 RHBDF2Q6PJF5 856 aa27.11■■□□□ 1.93
CPSF6-205ENST00000550075 Q6ZNB5 142 aa27.11■■□□□ 1.93
CPSF6-205ENST00000550075 TOGARAM2Q6ZUX3 1019 aa27.11■■□□□ 1.93
CPSF6-205ENST00000550075 NOP9Q86U38 636 aaKnown RBP27.11■■□□□ 1.93
CPSF6-205ENST00000550075 C1orf210Q8IVY1 113 aa27.11■■□□□ 1.93
CPSF6-205ENST00000550075 WDTC1Q8N5D0 677 aa27.11■■□□□ 1.93
CPSF6-205ENST00000550075 PALM2-AKAP2B1ALY0 433 aaPredicted RBP27.1■■□□□ 1.93
CPSF6-205ENST00000550075 CAPN9O14815 690 aa27.1■■□□□ 1.93
CPSF6-205ENST00000550075 HOXC11O43248 304 aaPredicted RBP27.1■■□□□ 1.93
CPSF6-205ENST00000550075 LAMTOR5O43504 91 aa27.1■■□□□ 1.93
CPSF6-205ENST00000550075 CCDC172P0C7W6 258 aa27.1■■□□□ 1.93
CPSF6-205ENST00000550075 NCAM1P13591 858 aa27.1■■□□□ 1.93
CPSF6-205ENST00000550075 CDH5P33151 784 aaPredicted RBP27.1■■□□□ 1.93
CPSF6-205ENST00000550075 EIF2DP41214 584 aaKnown RBP27.1■■□□□ 1.93
CPSF6-205ENST00000550075 HARS2P49590 506 aaKnown RBP27.1■■□□□ 1.93
CPSF6-205ENST00000550075 FZD5Q13467 585 aa27.1■■□□□ 1.93
CPSF6-205ENST00000550075 CCINQ13939 588 aa27.1■■□□□ 1.93
CPSF6-205ENST00000550075 ANGPT1Q15389 498 aa27.1■■□□□ 1.93
CPSF6-205ENST00000550075 CCDC26Q8TAB7 109 aa27.1■■□□□ 1.93
CPSF6-205ENST00000550075 DDX1Q92499 740 aaKnown RBP27.1■■□□□ 1.93
CPSF6-205ENST00000550075 CHFRQ96EP1 664 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms