RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 BCAT2O15382 392 aaPredicted RBP14.31□□□□□ -0.12
CDX2-202ENST00000548877 TLR5O60602 858 aa14.31□□□□□ -0.12
CDX2-202ENST00000548877 CILPO75339 1184 aa14.31□□□□□ -0.12
CDX2-202ENST00000548877 NCAM1P13591 858 aa14.31□□□□□ -0.12
CDX2-202ENST00000548877 PDIA4P13667 645 aaKnown RBP14.31□□□□□ -0.12
CDX2-202ENST00000548877 ACO1P21399 889 aaKnown RBP14.31□□□□□ -0.12
CDX2-202ENST00000548877 OXTRP30559 389 aa14.31□□□□□ -0.12
CDX2-202ENST00000548877 ATICP31939 592 aa14.31□□□□□ -0.12
CDX2-202ENST00000548877 HOXD13P35453 343 aa14.31□□□□□ -0.12
CDX2-202ENST00000548877 MATKP42679 507 aa14.31□□□□□ -0.12
CDX2-202ENST00000548877 SLC5A3P53794 718 aa14.31□□□□□ -0.12
CDX2-202ENST00000548877 IFRD2Q12894 506 aaPredicted RBP14.31□□□□□ -0.12
CDX2-202ENST00000548877 WDR72Q3MJ13 1102 aa14.31□□□□□ -0.12
CDX2-202ENST00000548877 RRAGBQ5VZM2 374 aa14.31□□□□□ -0.12
CDX2-202ENST00000548877 FAM35AQ86V20 835 aa14.31□□□□□ -0.12
CDX2-202ENST00000548877 SETD7Q8WTS6 366 aaKnown RBP14.31□□□□□ -0.12
CDX2-202ENST00000548877 PCED1AQ9H1Q7 454 aa14.31□□□□□ -0.12
CDX2-202ENST00000548877 PRDM16Q9HAZ2 1276 aa14.31□□□□□ -0.12
CDX2-202ENST00000548877 DMAP1Q9NPF5 467 aaPredicted RBP14.31□□□□□ -0.12
CDX2-202ENST00000548877 CYLDQ9NQC7 956 aa14.31□□□□□ -0.12
CDX2-202ENST00000548877 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.31□□□□□ -0.12
CDX2-202ENST00000548877 PANK4Q9NVE7 773 aa14.31□□□□□ -0.12
CDX2-202ENST00000548877 HSPBP1Q9NZL4 362 aa14.31□□□□□ -0.12
CDX2-202ENST00000548877 GMIPQ9P107 970 aa14.31□□□□□ -0.12
CDX2-202ENST00000548877 FBXO2Q9UK22 296 aaPredicted RBP14.31□□□□□ -0.12
CDX2-202ENST00000548877 FNDC3AQ9Y2H6 1198 aaKnown RBP14.31□□□□□ -0.12
CDX2-202ENST00000548877 SLC27A6Q9Y2P4 619 aa14.31□□□□□ -0.12
CDX2-202ENST00000548877 SRPRBQ9Y5M8 271 aaKnown RBP14.31□□□□□ -0.12
CDX2-202ENST00000548877 ATP8B3O60423 1300 aa14.31□□□□□ -0.12
CDX2-202ENST00000548877 TRABD2BA6NFA1 517 aa14.3□□□□□ -0.12
CDX2-202ENST00000548877 EIF4E1BA6NMX2 242 aaKnown RBP14.3□□□□□ -0.12
CDX2-202ENST00000548877 MEI4A8MW99 385 aa14.3□□□□□ -0.12
CDX2-202ENST00000548877 KCNJ18B7U540 433 aa14.3□□□□□ -0.12
CDX2-202ENST00000548877 WASH3PC4AMC7 463 aa14.3□□□□□ -0.12
CDX2-202ENST00000548877 NEDD8-MDP1E9PL57 170 aa14.3□□□□□ -0.12
CDX2-202ENST00000548877 ATXN1LP0C7T5 689 aaKnown RBP14.3□□□□□ -0.12
CDX2-202ENST00000548877 IDEP14735 1019 aa14.3□□□□□ -0.12
CDX2-202ENST00000548877 DGKGP49619 791 aa14.3□□□□□ -0.12
CDX2-202ENST00000548877 TNNC1P63316 161 aa14.3□□□□□ -0.12
CDX2-202ENST00000548877 PSMD6Q15008 389 aa14.3□□□□□ -0.12
CDX2-202ENST00000548877 NFKBIBQ15653 356 aa14.3□□□□□ -0.12
CDX2-202ENST00000548877 SMAD1Q15797 465 aaKnown RBP14.3□□□□□ -0.12
CDX2-202ENST00000548877 HLA-BQ31612 363 aa14.3□□□□□ -0.12
CDX2-202ENST00000548877 FUT11Q495W5 492 aa14.3□□□□□ -0.12
CDX2-202ENST00000548877 KLHDC10Q6PID8 442 aa14.3□□□□□ -0.12
CDX2-202ENST00000548877 KIAA1324Q6UXG2 1013 aaKnown RBP14.3□□□□□ -0.12
CDX2-202ENST00000548877 ZCCHC9Q8N567 271 aaKnown RBP14.3□□□□□ -0.12
CDX2-202ENST00000548877 NOC3LQ8WTT2 800 aaKnown RBP14.3□□□□□ -0.12
CDX2-202ENST00000548877 SMARCD1Q96GM5 515 aa14.3□□□□□ -0.12
CDX2-202ENST00000548877 GBP4Q96PP9 640 aa14.3□□□□□ -0.12
CDX2-202ENST00000548877 UBL7Q96S82 380 aaPredicted RBP14.3□□□□□ -0.12
CDX2-202ENST00000548877 CGRRF1Q99675 332 aa14.3□□□□□ -0.12
CDX2-202ENST00000548877 GPR174Q9BXC1 333 aa14.3□□□□□ -0.12
CDX2-202ENST00000548877 MKRN2Q9H000 416 aaKnown RBP14.3□□□□□ -0.12
CDX2-202ENST00000548877 FBXO44Q9H4M3 255 aa14.3□□□□□ -0.12
CDX2-202ENST00000548877 CSNK1G1Q9HCP0 422 aa14.3□□□□□ -0.12
CDX2-202ENST00000548877 THAP10Q9P2Z0 257 aaPredicted RBP14.3□□□□□ -0.12
CDX2-202ENST00000548877 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.3□□□□□ -0.12
CDX2-202ENST00000548877 STON1Q9Y6Q2 735 aa14.3□□□□□ -0.12
CDX2-202ENST00000548877 MORC2Q9Y6X9 1032 aaPredicted RBP14.3□□□□□ -0.12
CDX2-202ENST00000548877 IRF1P10914 325 aa14.29□□□□□ -0.12
CDX2-202ENST00000548877 PGFP49763 221 aa14.29□□□□□ -0.12
CDX2-202ENST00000548877 TPMTP51580 245 aa14.29□□□□□ -0.12
CDX2-202ENST00000548877 CYP4F3Q08477 520 aa14.29□□□□□ -0.12
CDX2-202ENST00000548877 STARD3Q14849 445 aa14.29□□□□□ -0.12
CDX2-202ENST00000548877 SNRNP35Q16560 246 aaKnown RBP14.29□□□□□ -0.12
CDX2-202ENST00000548877 PTPRNQ16849 979 aa14.29□□□□□ -0.12
CDX2-202ENST00000548877 DCAF12L1Q5VU92 463 aa14.29□□□□□ -0.12
CDX2-202ENST00000548877 Q6ZNB5 142 aa14.29□□□□□ -0.12
CDX2-202ENST00000548877 CCDC73Q6ZRK6 1079 aa14.29□□□□□ -0.12
CDX2-202ENST00000548877 STXBP4Q6ZWJ1 553 aa14.29□□□□□ -0.12
CDX2-202ENST00000548877 FUKQ8N0W3 1084 aa14.29□□□□□ -0.12
CDX2-202ENST00000548877 ZNF276Q8N554 614 aa14.29□□□□□ -0.12
CDX2-202ENST00000548877 PDCD7Q8N8D1 485 aaKnown RBP14.29□□□□□ -0.12
CDX2-202ENST00000548877 ZMIZ2Q8NF64 920 aa14.29□□□□□ -0.12
CDX2-202ENST00000548877 ZNF516Q92618 1163 aa14.29□□□□□ -0.12
CDX2-202ENST00000548877 TNIP3Q96KP6 325 aa14.29□□□□□ -0.12
CDX2-202ENST00000548877 TRIM9Q9C026 710 aa14.29□□□□□ -0.12
CDX2-202ENST00000548877 NACA2Q9H009 215 aa14.29□□□□□ -0.12
CDX2-202ENST00000548877 GZF1Q9H116 711 aaPredicted RBP14.29□□□□□ -0.12
CDX2-202ENST00000548877 OSGEPQ9NPF4 335 aa14.29□□□□□ -0.12
CDX2-202ENST00000548877 TLR8Q9NR97 1041 aaKnown RBP14.29□□□□□ -0.12
CDX2-202ENST00000548877 LSM7Q9UK45 103 aaKnown RBP14.29□□□□□ -0.12
CDX2-202ENST00000548877 EIF3DO15371 548 aaKnown RBP eCLIP14.28□□□□□ -0.12
CDX2-202ENST00000548877 TNFSF14O43557 240 aa14.28□□□□□ -0.12
CDX2-202ENST00000548877 PENKP01210 267 aaPredicted RBP14.28□□□□□ -0.12
CDX2-202ENST00000548877 TNNI1P19237 187 aa14.28□□□□□ -0.12
CDX2-202ENST00000548877 ATP5C1P36542 298 aaKnown RBP14.28□□□□□ -0.12
CDX2-202ENST00000548877 TXLNAP40222 546 aa14.28□□□□□ -0.12
CDX2-202ENST00000548877 MYL6P60660 151 aa14.28□□□□□ -0.12
CDX2-202ENST00000548877 SNRPFP62306 86 aaKnown RBP14.28□□□□□ -0.12
CDX2-202ENST00000548877 CYP24A1Q07973 514 aa14.28□□□□□ -0.12
CDX2-202ENST00000548877 GOLGA8FQ08AF8 430 aa14.28□□□□□ -0.12
CDX2-202ENST00000548877 GOLGA8DPQ0D2H9 430 aa14.28□□□□□ -0.12
CDX2-202ENST00000548877 C19orf57Q0VDD7 668 aa14.28□□□□□ -0.12
CDX2-202ENST00000548877 SUZ12Q15022 739 aaKnown RBP14.28□□□□□ -0.12
CDX2-202ENST00000548877 E2F5Q15329 346 aa14.28□□□□□ -0.12
CDX2-202ENST00000548877 LARP1BQ659C4 914 aaKnown RBP14.28□□□□□ -0.12
CDX2-202ENST00000548877 TPGS1Q6ZTW0 290 aa14.28□□□□□ -0.12
CDX2-202ENST00000548877 EPM2AIP1Q7L775 607 aaPredicted RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms