RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 ETFBKMTQ8IXQ9 262 aa11.96□□□□□ -0.49
BEST3-209ENST00000548658 PPM1KQ8N3J5 372 aa11.96□□□□□ -0.49
BEST3-209ENST00000548658 FAM160A2Q8N612 972 aaPredicted RBP11.96□□□□□ -0.49
BEST3-209ENST00000548658 KCTD13Q8WZ19 329 aa11.96□□□□□ -0.49
BEST3-209ENST00000548658 ZC3H10Q96K80 434 aaKnown RBP11.96□□□□□ -0.49
BEST3-209ENST00000548658 FAM81BQ96LP2 452 aa11.96□□□□□ -0.49
BEST3-209ENST00000548658 IPO9Q96P70 1041 aaKnown RBP11.96□□□□□ -0.49
BEST3-209ENST00000548658 HHIPQ96QV1 700 aa11.96□□□□□ -0.49
BEST3-209ENST00000548658 BBS2Q9BXC9 721 aa11.96□□□□□ -0.49
BEST3-209ENST00000548658 SRRTQ9BXP5 876 aaKnown RBP11.96□□□□□ -0.49
BEST3-209ENST00000548658 POLMQ9NP87 494 aaPredicted RBP11.96□□□□□ -0.49
BEST3-209ENST00000548658 OLA1Q9NTK5 396 aaKnown RBP11.96□□□□□ -0.49
BEST3-209ENST00000548658 DLL3Q9NYJ7 618 aa11.96□□□□□ -0.49
BEST3-209ENST00000548658 MARK1Q9P0L2 795 aa11.96□□□□□ -0.49
BEST3-209ENST00000548658 CTNND2Q9UQB3 1225 aa11.96□□□□□ -0.49
BEST3-209ENST00000548658 ZBTB24O43167 697 aaPredicted RBP11.95□□□□□ -0.5
BEST3-209ENST00000548658 GREM1O60565 184 aa11.95□□□□□ -0.5
BEST3-209ENST00000548658 TULP3O75386 442 aa11.95□□□□□ -0.5
BEST3-209ENST00000548658 RHOBTB1O94844 696 aa11.95□□□□□ -0.5
BEST3-209ENST00000548658 AFPP02771 609 aaKnown RBP11.95□□□□□ -0.5
BEST3-209ENST00000548658 TGM1P22735 817 aa11.95□□□□□ -0.5
BEST3-209ENST00000548658 SEC13P55735 322 aa11.95□□□□□ -0.5
BEST3-209ENST00000548658 YWHAGP61981 247 aaKnown RBP eCLIP11.95□□□□□ -0.5
BEST3-209ENST00000548658 PDE4CQ08493 712 aa11.95□□□□□ -0.5
BEST3-209ENST00000548658 SPEM2Q0P670 501 aa11.95□□□□□ -0.5
BEST3-209ENST00000548658 SRSF5Q13243 272 aaKnown RBP11.95□□□□□ -0.5
BEST3-209ENST00000548658 E2F5Q15329 346 aa11.95□□□□□ -0.5
BEST3-209ENST00000548658 ELF2Q15723 593 aa11.95□□□□□ -0.5
BEST3-209ENST00000548658 GOLGA7BQ2TAP0 167 aa11.95□□□□□ -0.5
BEST3-209ENST00000548658 LCLAT1Q6UWP7 414 aa11.95□□□□□ -0.5
BEST3-209ENST00000548658 TTC30AQ86WT1 665 aa11.95□□□□□ -0.5
BEST3-209ENST00000548658 MIB1Q86YT6 1006 aa11.95□□□□□ -0.5
BEST3-209ENST00000548658 SIX6OS1Q8N1H7 587 aa11.95□□□□□ -0.5
BEST3-209ENST00000548658 SCML4Q8N228 414 aa11.95□□□□□ -0.5
BEST3-209ENST00000548658 NAT16Q8N8M0 369 aa11.95□□□□□ -0.5
BEST3-209ENST00000548658 MLKLQ8NB16 471 aa11.95□□□□□ -0.5
BEST3-209ENST00000548658 EHBP1Q8NDI1 1231 aa11.95□□□□□ -0.5
BEST3-209ENST00000548658 RMDN1Q96DB5 314 aa11.95□□□□□ -0.5
BEST3-209ENST00000548658 CNOT6LQ96LI5 555 aaKnown RBP11.95□□□□□ -0.5
BEST3-209ENST00000548658 CNGB3Q9NQW8 809 aa11.95□□□□□ -0.5
BEST3-209ENST00000548658 SEMA4GQ9NTN9 838 aa11.95□□□□□ -0.5
BEST3-209ENST00000548658 MARCH2Q9P0N8 246 aa11.95□□□□□ -0.5
BEST3-209ENST00000548658 RWDD2AQ9UIY3 292 aa11.95□□□□□ -0.5
BEST3-209ENST00000548658 NUDT5Q9UKK9 219 aa11.95□□□□□ -0.5
BEST3-209ENST00000548658 STARD13Q9Y3M8 1113 aa11.95□□□□□ -0.5
BEST3-209ENST00000548658 PCDHB4Q9Y5E5 795 aa11.95□□□□□ -0.5
BEST3-209ENST00000548658 PCDHGA5Q9Y5G8 931 aa11.95□□□□□ -0.5
BEST3-209ENST00000548658 ZNF292O60281 2723 aa11.95□□□□□ -0.5
BEST3-209ENST00000548658 NEDD8-MDP1E9PL57 170 aa11.94□□□□□ -0.5
BEST3-209ENST00000548658 O00370 1275 aa11.94□□□□□ -0.5
BEST3-209ENST00000548658 CACNG3O60359 315 aa11.94□□□□□ -0.5
BEST3-209ENST00000548658 STC2O76061 302 aa11.94□□□□□ -0.5
BEST3-209ENST00000548658 PRKCSHP14314 528 aaPredicted RBP11.94□□□□□ -0.5
BEST3-209ENST00000548658 TYRP14679 529 aa11.94□□□□□ -0.5
BEST3-209ENST00000548658 TIE1P35590 1138 aa11.94□□□□□ -0.5
BEST3-209ENST00000548658 KIR2DL1P43626 348 aaPredicted RBP11.94□□□□□ -0.5
BEST3-209ENST00000548658 STX17P56962 302 aa11.94□□□□□ -0.5
BEST3-209ENST00000548658 EFEMP1Q12805 493 aa11.94□□□□□ -0.5
BEST3-209ENST00000548658 BYSLQ13895 437 aaKnown RBP11.94□□□□□ -0.5
BEST3-209ENST00000548658 CNGA2Q16280 664 aa11.94□□□□□ -0.5
BEST3-209ENST00000548658 CAMK4Q16566 473 aa11.94□□□□□ -0.5
BEST3-209ENST00000548658 SMYD5Q6GMV2 418 aa11.94□□□□□ -0.5
BEST3-209ENST00000548658 GRAMD4Q6IC98 578 aa11.94□□□□□ -0.5
BEST3-209ENST00000548658 SDE2Q6IQ49 451 aa11.94□□□□□ -0.5
BEST3-209ENST00000548658 Q6ZNB5 142 aa11.94□□□□□ -0.5
BEST3-209ENST00000548658 ENOSF1Q7L5Y1 443 aa11.94□□□□□ -0.5
BEST3-209ENST00000548658 DGLUCYQ7Z3D6 616 aa11.94□□□□□ -0.5
BEST3-209ENST00000548658 RASSF3Q86WH2 238 aa11.94□□□□□ -0.5
BEST3-209ENST00000548658 C12orf40Q86WS4 652 aa11.94□□□□□ -0.5
BEST3-209ENST00000548658 PHTF2Q8N3S3 785 aa11.94□□□□□ -0.5
BEST3-209ENST00000548658 CCDC33Q8N5R6 958 aa11.94□□□□□ -0.5
BEST3-209ENST00000548658 ALLCQ8N6M5 410 aa11.94□□□□□ -0.5
BEST3-209ENST00000548658 UBR7Q8N806 425 aa11.94□□□□□ -0.5
BEST3-209ENST00000548658 TERB1Q8NA31 727 aa11.94□□□□□ -0.5
BEST3-209ENST00000548658 IL17RCQ8NAC3 791 aa11.94□□□□□ -0.5
BEST3-209ENST00000548658 TXNDC5Q8NBS9 432 aaKnown RBP11.94□□□□□ -0.5
BEST3-209ENST00000548658 LMO3Q8TAP4 145 aa11.94□□□□□ -0.5
BEST3-209ENST00000548658 RNF139Q8WU17 664 aa11.94□□□□□ -0.5
BEST3-209ENST00000548658 ABCC13Q9NSE7 274 aa11.94□□□□□ -0.5
BEST3-209ENST00000548658 DNAJC17Q9NVM6 304 aaKnown RBP11.94□□□□□ -0.5
BEST3-209ENST00000548658 RASAL2Q9UJF2 1139 aa11.94□□□□□ -0.5
BEST3-209ENST00000548658 CDV3Q9UKY7 258 aaKnown RBP11.94□□□□□ -0.5
BEST3-209ENST00000548658 MYOFQ9NZM1 2061 aa11.94□□□□□ -0.5
BEST3-209ENST00000548658 FRYLO94915 3013 aa11.94□□□□□ -0.5
BEST3-209ENST00000548658 MYO16Q9Y6X6 1858 aa11.93□□□□□ -0.5
BEST3-209ENST00000548658 MDM4O15151 490 aa11.93□□□□□ -0.5
BEST3-209ENST00000548658 KLF8O95600 359 aaPredicted RBP11.93□□□□□ -0.5
BEST3-209ENST00000548658 CYBBP04839 570 aa11.93□□□□□ -0.5
BEST3-209ENST00000548658 ANP32AP39687 249 aaKnown RBP11.93□□□□□ -0.5
BEST3-209ENST00000548658 HARS2P49590 506 aaKnown RBP11.93□□□□□ -0.5
BEST3-209ENST00000548658 DGKGP49619 791 aa11.93□□□□□ -0.5
BEST3-209ENST00000548658 ZNF445P59923 1031 aa11.93□□□□□ -0.5
BEST3-209ENST00000548658 KDSRQ06136 332 aa11.93□□□□□ -0.5
BEST3-209ENST00000548658 RSPO4Q2I0M5 234 aaPredicted RBP11.93□□□□□ -0.5
BEST3-209ENST00000548658 PKDCCQ504Y2 493 aa11.93□□□□□ -0.5
BEST3-209ENST00000548658 C10orf76Q5T2E6 689 aa11.93□□□□□ -0.5
BEST3-209ENST00000548658 ANO7Q6IWH7 933 aa11.93□□□□□ -0.5
BEST3-209ENST00000548658 TPGS1Q6ZTW0 290 aa11.93□□□□□ -0.5
BEST3-209ENST00000548658 KBTBD6Q86V97 674 aa11.93□□□□□ -0.5
BEST3-209ENST00000548658 ZNF513Q8N8E2 541 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms