RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 FAM117AQ9C073 453 aa14.91□□□□□ -0.02
PTCH1-217ENST00000548420 PCIF1Q9H4Z3 704 aa14.91□□□□□ -0.02
PTCH1-217ENST00000548420 AGPAT3Q9NRZ7 376 aa14.91□□□□□ -0.02
PTCH1-217ENST00000548420 CGNQ9P2M7 1197 aaKnown RBP14.91□□□□□ -0.02
PTCH1-217ENST00000548420 HEMK1Q9Y5R4 338 aaPredicted RBP14.91□□□□□ -0.02
PTCH1-217ENST00000548420 ANAPC1Q9H1A4 1944 aa14.91□□□□□ -0.02
PTCH1-217ENST00000548420 SPTBN1Q01082 2364 aaKnown RBP14.9□□□□□ -0.02
PTCH1-217ENST00000548420 A0A1B0GVT2 93 aa14.9□□□□□ -0.02
PTCH1-217ENST00000548420 GOLGA8IPA6NC78 632 aa14.9□□□□□ -0.02
PTCH1-217ENST00000548420 GOLGA8JA6NMD2 632 aa14.9□□□□□ -0.02
PTCH1-217ENST00000548420 KCNK3O14649 394 aa14.9□□□□□ -0.02
PTCH1-217ENST00000548420 PPEF2O14830 753 aa14.9□□□□□ -0.02
PTCH1-217ENST00000548420 RHOBTB3O94955 611 aa14.9□□□□□ -0.02
PTCH1-217ENST00000548420 RPN1P04843 607 aaKnown RBP14.9□□□□□ -0.02
PTCH1-217ENST00000548420 CYP17A1P05093 508 aa14.9□□□□□ -0.02
PTCH1-217ENST00000548420 WASP42768 502 aa14.9□□□□□ -0.02
PTCH1-217ENST00000548420 RIPPLY3P57055 190 aa14.9□□□□□ -0.02
PTCH1-217ENST00000548420 VEPH1Q14D04 833 aa14.9□□□□□ -0.02
PTCH1-217ENST00000548420 KNOP1Q1ED39 458 aaKnown RBP14.9□□□□□ -0.02
PTCH1-217ENST00000548420 C6orf132Q5T0Z8 1188 aa14.9□□□□□ -0.02
PTCH1-217ENST00000548420 HES3Q5TGS1 186 aa14.9□□□□□ -0.02
PTCH1-217ENST00000548420 GPD1LQ8N335 351 aa14.9□□□□□ -0.02
PTCH1-217ENST00000548420 PHTF2Q8N3S3 785 aa14.9□□□□□ -0.02
PTCH1-217ENST00000548420 C1orf216Q8TAB5 229 aa14.9□□□□□ -0.02
PTCH1-217ENST00000548420 CXorf38Q8TB03 319 aa14.9□□□□□ -0.02
PTCH1-217ENST00000548420 SH3RF2Q8TEC5 729 aa14.9□□□□□ -0.02
PTCH1-217ENST00000548420 PNKPQ96T60 521 aa14.9□□□□□ -0.02
PTCH1-217ENST00000548420 OXCT2Q9BYC2 517 aaPredicted RBP14.9□□□□□ -0.02
PTCH1-217ENST00000548420 KIAA1586Q9HCI6 787 aa14.9□□□□□ -0.02
PTCH1-217ENST00000548420 DPP3Q9NY33 737 aa14.9□□□□□ -0.02
PTCH1-217ENST00000548420 RBAKQ9NYW8 714 aaPredicted RBP14.9□□□□□ -0.02
PTCH1-217ENST00000548420 NBASA2RRP1 2371 aa14.9□□□□□ -0.02
PTCH1-217ENST00000548420 ZNF233A6NK53 670 aa14.89□□□□□ -0.03
PTCH1-217ENST00000548420 ZNF217O75362 1048 aa14.89□□□□□ -0.03
PTCH1-217ENST00000548420 AFPP02771 609 aaKnown RBP14.89□□□□□ -0.03
PTCH1-217ENST00000548420 PRR29P0C7W0 189 aa14.89□□□□□ -0.03
PTCH1-217ENST00000548420 HNF1BP35680 557 aa14.89□□□□□ -0.03
PTCH1-217ENST00000548420 TUFMP49411 452 aaKnown RBP14.89□□□□□ -0.03
PTCH1-217ENST00000548420 GPR15P49685 360 aa14.89□□□□□ -0.03
PTCH1-217ENST00000548420 VAC14Q08AM6 782 aa14.89□□□□□ -0.03
PTCH1-217ENST00000548420 FBXL19Q6PCT2 694 aa14.89□□□□□ -0.03
PTCH1-217ENST00000548420 ATG14Q6ZNE5 492 aa14.89□□□□□ -0.03
PTCH1-217ENST00000548420 FOXJ1Q92949 421 aa14.89□□□□□ -0.03
PTCH1-217ENST00000548420 HIC2Q96JB3 615 aa14.89□□□□□ -0.03
PTCH1-217ENST00000548420 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.89□□□□□ -0.03
PTCH1-217ENST00000548420 MIR1-1HGQ9H1L0 117 aa14.89□□□□□ -0.03
PTCH1-217ENST00000548420 KCTD10Q9H3F6 313 aa14.89□□□□□ -0.03
PTCH1-217ENST00000548420 EXOC1Q9NV70 894 aa14.89□□□□□ -0.03
PTCH1-217ENST00000548420 DMAC2Q9NW81 257 aa14.89□□□□□ -0.03
PTCH1-217ENST00000548420 GCNT4Q9P109 453 aa14.89□□□□□ -0.03
PTCH1-217ENST00000548420 MAN2B2Q9Y2E5 1009 aa14.89□□□□□ -0.03
PTCH1-217ENST00000548420 SUV39H1O43463 412 aa14.88□□□□□ -0.03
PTCH1-217ENST00000548420 NDUFS2O75306 463 aa14.88□□□□□ -0.03
PTCH1-217ENST00000548420 NFATC1O95644 943 aa14.88□□□□□ -0.03
PTCH1-217ENST00000548420 APODP05090 189 aa14.88□□□□□ -0.03
PTCH1-217ENST00000548420 TYMPP19971 482 aa14.88□□□□□ -0.03
PTCH1-217ENST00000548420 GRK6P43250 576 aa14.88□□□□□ -0.03
PTCH1-217ENST00000548420 KDSRQ06136 332 aa14.88□□□□□ -0.03
PTCH1-217ENST00000548420 DNAJC3Q13217 504 aa14.88□□□□□ -0.03
PTCH1-217ENST00000548420 KCNB1Q14721 858 aa14.88□□□□□ -0.03
PTCH1-217ENST00000548420 SUZ12Q15022 739 aaKnown RBP14.88□□□□□ -0.03
PTCH1-217ENST00000548420 KIF19Q2TAC6 998 aa14.88□□□□□ -0.03
PTCH1-217ENST00000548420 SLC39A12Q504Y0 691 aa14.88□□□□□ -0.03
PTCH1-217ENST00000548420 OVOS1Q6IE37 1185 aa14.88□□□□□ -0.03
PTCH1-217ENST00000548420 IL27RAQ6UWB1 636 aa14.88□□□□□ -0.03
PTCH1-217ENST00000548420 CBWD2Q8IUF1 395 aa14.88□□□□□ -0.03
PTCH1-217ENST00000548420 NELFCDQ8IXH7 590 aa14.88□□□□□ -0.03
PTCH1-217ENST00000548420 ZNF248Q8NDW4 579 aa14.88□□□□□ -0.03
PTCH1-217ENST00000548420 MRPS31Q92665 395 aaKnown RBP14.88□□□□□ -0.03
PTCH1-217ENST00000548420 ZFRQ96KR1 1074 aaKnown RBP14.88□□□□□ -0.03
PTCH1-217ENST00000548420 PDE11AQ9HCR9 933 aa14.88□□□□□ -0.03
PTCH1-217ENST00000548420 SSUH2Q9Y2M2 353 aa14.88□□□□□ -0.03
PTCH1-217ENST00000548420 PCDHGA1Q9Y5H4 931 aa14.88□□□□□ -0.03
PTCH1-217ENST00000548420 SNX11Q9Y5W9 270 aa14.88□□□□□ -0.03
PTCH1-217ENST00000548420 SCN1AP35498 2009 aa14.87□□□□□ -0.03
PTCH1-217ENST00000548420 CLIC2O15247 247 aa14.87□□□□□ -0.03
PTCH1-217ENST00000548420 BCAT2O15382 392 aaPredicted RBP14.87□□□□□ -0.03
PTCH1-217ENST00000548420 CYP11A1P05108 521 aa14.87□□□□□ -0.03
PTCH1-217ENST00000548420 HAPLN1P10915 354 aaPredicted RBP14.87□□□□□ -0.03
PTCH1-217ENST00000548420 TNFRSF4P43489 277 aa14.87□□□□□ -0.03
PTCH1-217ENST00000548420 CSNK1EP49674 416 aaKnown RBP14.87□□□□□ -0.03
PTCH1-217ENST00000548420 UCNP55089 124 aa14.87□□□□□ -0.03
PTCH1-217ENST00000548420 SURF1Q15526 300 aa14.87□□□□□ -0.03
PTCH1-217ENST00000548420 TAF12Q16514 161 aa14.87□□□□□ -0.03
PTCH1-217ENST00000548420 SDHAF4Q5VUM1 108 aa14.87□□□□□ -0.03
PTCH1-217ENST00000548420 SCARA3Q6AZY7 606 aa14.87□□□□□ -0.03
PTCH1-217ENST00000548420 HS2ST1Q7LGA3 356 aa14.87□□□□□ -0.03
PTCH1-217ENST00000548420 USP37Q86T82 979 aa14.87□□□□□ -0.03
PTCH1-217ENST00000548420 LRRTM3Q86VH5 581 aa14.87□□□□□ -0.03
PTCH1-217ENST00000548420 SLC9A9Q8IVB4 645 aa14.87□□□□□ -0.03
PTCH1-217ENST00000548420 ELOA2Q8IYF1 753 aaPredicted RBP14.87□□□□□ -0.03
PTCH1-217ENST00000548420 ADGRG2Q8IZP9 1017 aa14.87□□□□□ -0.03
PTCH1-217ENST00000548420 ARL14EPQ8N8R7 260 aaPredicted RBP14.87□□□□□ -0.03
PTCH1-217ENST00000548420 C1orf127Q8N9H9 656 aa14.87□□□□□ -0.03
PTCH1-217ENST00000548420 XXYLT1Q8NBI6 393 aa14.87□□□□□ -0.03
PTCH1-217ENST00000548420 SPATA20Q8TB22 786 aa14.87□□□□□ -0.03
PTCH1-217ENST00000548420 GOLGA5Q8TBA6 731 aa14.87□□□□□ -0.03
PTCH1-217ENST00000548420 CACTINQ8WUQ7 758 aaKnown RBP14.87□□□□□ -0.03
PTCH1-217ENST00000548420 SENP8Q96LD8 212 aa14.87□□□□□ -0.03
PTCH1-217ENST00000548420 TIGD1Q96MW7 591 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms