RNA–Protein interactions for RNA: ENST00000548283.6

TMEM116-206, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 3,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-206ENST00000548283 CTAGE15A4D2H0 777 aa7.56□□□□□ -1.2
TMEM116-206ENST00000548283 SPTLC1O15269 473 aa7.56□□□□□ -1.2
TMEM116-206ENST00000548283 LZTS3O60299 673 aaPredicted RBP7.56□□□□□ -1.2
TMEM116-206ENST00000548283 CTAGE8P0CG41 777 aa7.56□□□□□ -1.2
TMEM116-206ENST00000548283 DLATP10515 647 aaKnown RBP7.56□□□□□ -1.2
TMEM116-206ENST00000548283 CKBP12277 381 aa7.56□□□□□ -1.2
TMEM116-206ENST00000548283 P4HA1P13674 534 aa7.56□□□□□ -1.2
TMEM116-206ENST00000548283 RFC2P35250 354 aa7.56□□□□□ -1.2
TMEM116-206ENST00000548283 PTGIRP43119 386 aa7.56□□□□□ -1.2
TMEM116-206ENST00000548283 PIN1Q13526 163 aaPredicted RBP7.56□□□□□ -1.2
TMEM116-206ENST00000548283 KIZQ2M2Z5 673 aa7.56□□□□□ -1.2
TMEM116-206ENST00000548283 LACTB2Q53H82 288 aaPredicted RBP7.56□□□□□ -1.2
TMEM116-206ENST00000548283 ISLR2Q6UXK2 745 aa7.56□□□□□ -1.2
TMEM116-206ENST00000548283 RNF180Q86T96 592 aa7.56□□□□□ -1.2
TMEM116-206ENST00000548283 RSPH3Q86UC2 560 aa7.56□□□□□ -1.2
TMEM116-206ENST00000548283 CTAGE6Q86UF2 777 aa7.56□□□□□ -1.2
TMEM116-206ENST00000548283 C11orf74Q86VG3 221 aa7.56□□□□□ -1.2
TMEM116-206ENST00000548283 CTAGE4Q8IX94 777 aa7.56□□□□□ -1.2
TMEM116-206ENST00000548283 PPM1KQ8N3J5 372 aa7.56□□□□□ -1.2
TMEM116-206ENST00000548283 CD99L2Q8TCZ2 262 aa7.56□□□□□ -1.2
TMEM116-206ENST00000548283 ZNF296Q8WUU4 475 aaPredicted RBP7.56□□□□□ -1.2
TMEM116-206ENST00000548283 TRIM63Q969Q1 353 aa7.56□□□□□ -1.2
TMEM116-206ENST00000548283 HPDLQ96IR7 371 aa7.56□□□□□ -1.2
TMEM116-206ENST00000548283 RTP3Q9BQQ7 232 aa7.56□□□□□ -1.2
TMEM116-206ENST00000548283 FTHL17Q9BXU8 183 aa7.56□□□□□ -1.2
TMEM116-206ENST00000548283 NEUROG2Q9H2A3 272 aa7.56□□□□□ -1.2
TMEM116-206ENST00000548283 FAM105AQ9NUU6 356 aa7.56□□□□□ -1.2
TMEM116-206ENST00000548283 PARVAQ9NVD7 372 aa7.56□□□□□ -1.2
TMEM116-206ENST00000548283 HSFX1Q9UBD0 423 aa7.56□□□□□ -1.2
TMEM116-206ENST00000548283 FAM92AA1XBS5 289 aa7.55□□□□□ -1.2
TMEM116-206ENST00000548283 RECQL4O94761 1208 aa7.55□□□□□ -1.2
TMEM116-206ENST00000548283 C1RP00736 705 aa7.55□□□□□ -1.2
TMEM116-206ENST00000548283 TYMPP19971 482 aa7.55□□□□□ -1.2
TMEM116-206ENST00000548283 YY1P25490 414 aa7.55□□□□□ -1.2
TMEM116-206ENST00000548283 YARSP54577 528 aaKnown RBP7.55□□□□□ -1.2
TMEM116-206ENST00000548283 GNGT1P63211 74 aa7.55□□□□□ -1.2
TMEM116-206ENST00000548283 XRCC4Q13426 336 aa7.55□□□□□ -1.2
TMEM116-206ENST00000548283 WDR45BQ5MNZ6 344 aa7.55□□□□□ -1.2
TMEM116-206ENST00000548283 OLFML1Q6UWY5 402 aa7.55□□□□□ -1.2
TMEM116-206ENST00000548283 PAQR9Q6ZVX9 377 aa7.55□□□□□ -1.2
TMEM116-206ENST00000548283 PSTKQ8IV42 348 aaKnown RBP7.55□□□□□ -1.2
TMEM116-206ENST00000548283 FAM26EQ8N5C1 309 aa7.55□□□□□ -1.2
TMEM116-206ENST00000548283 U2AF1L4Q8WU68 220 aaKnown RBP7.55□□□□□ -1.2
TMEM116-206ENST00000548283 CABS1Q96KC9 395 aa7.55□□□□□ -1.2
TMEM116-206ENST00000548283 ZNF560Q96MR9 790 aa7.55□□□□□ -1.2
TMEM116-206ENST00000548283 OSMRQ99650 979 aa7.55□□□□□ -1.2
TMEM116-206ENST00000548283 NXF3Q9H4D5 531 aaKnown RBP7.55□□□□□ -1.2
TMEM116-206ENST00000548283 ALG6Q9Y672 507 aa7.55□□□□□ -1.2
TMEM116-206ENST00000548283 A6NHS1 94 aa7.55□□□□□ -1.2
TMEM116-206ENST00000548283 SART1O43290 800 aaKnown RBP7.55□□□□□ -1.2
TMEM116-206ENST00000548283 INHAP05111 366 aa7.55□□□□□ -1.2
TMEM116-206ENST00000548283 RAB33AQ14088 237 aa7.55□□□□□ -1.2
TMEM116-206ENST00000548283 ANKRD20A8PQ5CZ79 823 aa7.55□□□□□ -1.2
TMEM116-206ENST00000548283 NAIF1Q69YI7 327 aaPredicted RBP7.55□□□□□ -1.2
TMEM116-206ENST00000548283 FAM169BQ8N8A8 192 aa7.55□□□□□ -1.2
TMEM116-206ENST00000548283 BEST2Q8NFU1 509 aa7.55□□□□□ -1.2
TMEM116-206ENST00000548283 TEKT4Q8WW24 435 aa7.55□□□□□ -1.2
TMEM116-206ENST00000548283 ALG3Q92685 438 aa7.55□□□□□ -1.2
TMEM116-206ENST00000548283 CYFIP2Q96F07 1278 aa7.55□□□□□ -1.2
TMEM116-206ENST00000548283 FAM210AQ96ND0 272 aa7.55□□□□□ -1.2
TMEM116-206ENST00000548283 SLC2A13Q96QE2 648 aa7.55□□□□□ -1.2
TMEM116-206ENST00000548283 CRB3Q9BUF7 120 aa7.55□□□□□ -1.2
TMEM116-206ENST00000548283 EPN3Q9H201 632 aa7.55□□□□□ -1.2
TMEM116-206ENST00000548283 DEF6Q9H4E7 631 aa7.55□□□□□ -1.2
TMEM116-206ENST00000548283 SMYD3Q9H7B4 428 aa7.55□□□□□ -1.2
TMEM116-206ENST00000548283 MRPL47Q9HD33 250 aaKnown RBP7.55□□□□□ -1.2
TMEM116-206ENST00000548283 KLC4Q9NSK0 619 aa7.55□□□□□ -1.2
TMEM116-206ENST00000548283 ST3GAL5Q9UNP4 418 aa7.55□□□□□ -1.2
TMEM116-206ENST00000548283 CAPN7Q9Y6W3 813 aa7.55□□□□□ -1.2
TMEM116-206ENST00000548283 SF3B1O75533 1304 aaKnown RBP eCLIP7.55□□□□□ -1.23e-7■■■■■ 114.9
TMEM116-206ENST00000548283 B2RBV5 119 aa7.54□□□□□ -1.2
TMEM116-206ENST00000548283 IGLV3-25P01717 112 aa7.54□□□□□ -1.2
TMEM116-206ENST00000548283 ITGB3P05106 788 aa7.54□□□□□ -1.2
TMEM116-206ENST00000548283 FGFR1P11362 822 aa7.54□□□□□ -1.2
TMEM116-206ENST00000548283 PTPN9P43378 593 aa7.54□□□□□ -1.2
TMEM116-206ENST00000548283 LILRA4P59901 499 aa7.54□□□□□ -1.2
TMEM116-206ENST00000548283 OCLNQ16625 522 aa7.54□□□□□ -1.2
TMEM116-206ENST00000548283 SV2CQ496J9 727 aa7.54□□□□□ -1.2
TMEM116-206ENST00000548283 CFAP221Q4G0U5 840 aa7.54□□□□□ -1.2
TMEM116-206ENST00000548283 ZBTB33Q86T24 672 aa7.54□□□□□ -1.2
TMEM116-206ENST00000548283 EXD1Q8NHP7 514 aa7.54□□□□□ -1.2
TMEM116-206ENST00000548283 SNRNP27Q8WVK2 155 aaKnown RBP7.54□□□□□ -1.2
TMEM116-206ENST00000548283 CTNNBL1Q8WYA6 563 aaPredicted RBP7.54□□□□□ -1.2
TMEM116-206ENST00000548283 RTP4Q96DX8 246 aa7.54□□□□□ -1.2
TMEM116-206ENST00000548283 BRD9Q9H8M2 597 aa7.54□□□□□ -1.2
TMEM116-206ENST00000548283 AGO3Q9H9G7 860 aaKnown RBP7.54□□□□□ -1.2
TMEM116-206ENST00000548283 TUBGCP4Q9UGJ1 667 aa7.54□□□□□ -1.2
TMEM116-206ENST00000548283 POLIQ9UNA4 740 aa7.54□□□□□ -1.2
TMEM116-206ENST00000548283 PCDHGB5Q9Y5G0 923 aa7.54□□□□□ -1.2
TMEM116-206ENST00000548283 A6NJY4 79 aa7.54□□□□□ -1.2
TMEM116-206ENST00000548283 TNFRSF21O75509 655 aa7.54□□□□□ -1.2
TMEM116-206ENST00000548283 ENPP1P22413 925 aa7.54□□□□□ -1.2
TMEM116-206ENST00000548283 MCM3P25205 808 aa7.54□□□□□ -1.2
TMEM116-206ENST00000548283 SLC12A2P55011 1212 aa7.54□□□□□ -1.2
TMEM116-206ENST00000548283 ORC1Q13415 861 aa7.54□□□□□ -1.2
TMEM116-206ENST00000548283 ZNF667Q5HYK9 610 aa7.54□□□□□ -1.2
TMEM116-206ENST00000548283 SYDE1Q6ZW31 735 aaPredicted RBP7.54□□□□□ -1.2
TMEM116-206ENST00000548283 ECHDC2Q86YB7 292 aa7.54□□□□□ -1.2
TMEM116-206ENST00000548283 ANKRD13BQ86YJ7 626 aa7.54□□□□□ -1.2
TMEM116-206ENST00000548283 CMASQ8NFW8 434 aaPredicted RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms