RNA–Protein interactions for RNA: ENST00000548211.1

RPAP3-205, Transcript of RNA polymerase II associated protein 3, human

TSL 2

Gene RPAP3, Length 555 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPAP3-205	ENST00000548211	MTHFD1L	Q6UB35	978 aa		4.53	□□□□□ -1.68
RPAP3-205	ENST00000548211	MRPL10	Q7Z7H8	261 aa	Known RBP	4.53	□□□□□ -1.68
RPAP3-205	ENST00000548211	BPIFB1	Q8TDL5	484 aa		4.53	□□□□□ -1.68
RPAP3-205	ENST00000548211	PIGO	Q8TEQ8	1089 aa		4.53	□□□□□ -1.68
RPAP3-205	ENST00000548211	VCPIP1	Q96JH7	1222 aa		4.53	□□□□□ -1.68
RPAP3-205	ENST00000548211	PUS7	Q96PZ0	661 aa	Known RBP	4.53	□□□□□ -1.68
RPAP3-205	ENST00000548211	MAP3K14	Q99558	947 aa		4.53	□□□□□ -1.68
RPAP3-205	ENST00000548211	FOXP1	Q9H334	677 aa	Predicted RBP	4.53	□□□□□ -1.68
RPAP3-205	ENST00000548211	TMEM184C	Q9NVA4	438 aa		4.53	□□□□□ -1.68
RPAP3-205	ENST00000548211	TFCP2L1	Q9NZI6	479 aa		4.53	□□□□□ -1.68
RPAP3-205	ENST00000548211	IP6K2	Q9UHH9	426 aa		4.53	□□□□□ -1.68
RPAP3-205	ENST00000548211	AMFR	Q9UKV5	643 aa		4.53	□□□□□ -1.68
RPAP3-205	ENST00000548211	PRAG1	Q86YV5	1406 aa		4.53	□□□□□ -1.68
RPAP3-205	ENST00000548211	KIF1B	O60333	1816 aa		4.53	□□□□□ -1.68
RPAP3-205	ENST00000548211	ARHGEF10	O15013	1369 aa		4.53	□□□□□ -1.69
RPAP3-205	ENST00000548211	CNTNAP2	Q9UHC6	1331 aa		4.52	□□□□□ -1.69
RPAP3-205	ENST00000548211		A0A087WWL8	130 aa		4.52	□□□□□ -1.69
RPAP3-205	ENST00000548211	TMEM232	C9JQI7	657 aa		4.52	□□□□□ -1.69
RPAP3-205	ENST00000548211	MYO1C	O00159	1063 aa		4.52	□□□□□ -1.69
RPAP3-205	ENST00000548211	PMPCB	O75439	489 aa		4.52	□□□□□ -1.69
RPAP3-205	ENST00000548211	MYCL	P12524	364 aa	Predicted RBP	4.52	□□□□□ -1.69
RPAP3-205	ENST00000548211	NPR1	P16066	1061 aa		4.52	□□□□□ -1.69
RPAP3-205	ENST00000548211	AKAP5	P24588	427 aa		4.52	□□□□□ -1.69
RPAP3-205	ENST00000548211	PRKAG1	P54619	331 aa		4.52	□□□□□ -1.69
RPAP3-205	ENST00000548211	RAB1A	P62820	205 aa		4.52	□□□□□ -1.69
RPAP3-205	ENST00000548211	GHRHR	Q02643	423 aa		4.52	□□□□□ -1.69
RPAP3-205	ENST00000548211	ZNF91	Q05481	1191 aa		4.52	□□□□□ -1.69
RPAP3-205	ENST00000548211	MLC1	Q15049	377 aa		4.52	□□□□□ -1.69
RPAP3-205	ENST00000548211	MGAT5B	Q3V5L5	792 aa		4.52	□□□□□ -1.69
RPAP3-205	ENST00000548211	BRDT	Q58F21	947 aa	Predicted RBP	4.52	□□□□□ -1.69
RPAP3-205	ENST00000548211	ATAT1	Q5SQI0	421 aa		4.52	□□□□□ -1.69
RPAP3-205	ENST00000548211	KRTAP5-11	Q6L8G4	156 aa		4.52	□□□□□ -1.69
RPAP3-205	ENST00000548211	SIRT6	Q8N6T7	355 aa		4.52	□□□□□ -1.69
RPAP3-205	ENST00000548211	ZNF398	Q8TD17	642 aa		4.52	□□□□□ -1.69
RPAP3-205	ENST00000548211	PNISR	Q8TF01	805 aa	Known RBP	4.52	□□□□□ -1.69
RPAP3-205	ENST00000548211	NSMCE1	Q8WV22	266 aa		4.52	□□□□□ -1.69
RPAP3-205	ENST00000548211	CCDC17	Q96LX7	622 aa		4.52	□□□□□ -1.69
RPAP3-205	ENST00000548211	TRMT13	Q9NUP7	481 aa	Known RBP	4.52	□□□□□ -1.69
RPAP3-205	ENST00000548211	VPS8	Q8N3P4	1428 aa		4.52	□□□□□ -1.69
RPAP3-205	ENST00000548211	NEXMIF	Q5QGS0	1516 aa		4.51	□□□□□ -1.69
RPAP3-205	ENST00000548211	IGKV2D-30	A0A075B6S6	120 aa		4.51	□□□□□ -1.69
RPAP3-205	ENST00000548211		A0A088AWK7	358 aa		4.51	□□□□□ -1.69
RPAP3-205	ENST00000548211	ABLIM3	O94929	683 aa		4.51	□□□□□ -1.69
RPAP3-205	ENST00000548211	PF4V1	P10720	104 aa		4.51	□□□□□ -1.69
RPAP3-205	ENST00000548211	CYP2C9	P11712	490 aa		4.51	□□□□□ -1.69
RPAP3-205	ENST00000548211	GK	P32189	559 aa		4.51	□□□□□ -1.69
RPAP3-205	ENST00000548211	ARFIP2	P53365	341 aa		4.51	□□□□□ -1.69
RPAP3-205	ENST00000548211	COPB1	P53618	953 aa	Known RBP	4.51	□□□□□ -1.69
RPAP3-205	ENST00000548211	WNT3	P56703	355 aa		4.51	□□□□□ -1.69
RPAP3-205	ENST00000548211	SATB1	Q01826	763 aa		4.51	□□□□□ -1.69
RPAP3-205	ENST00000548211	LMAN2	Q12907	356 aa		4.51	□□□□□ -1.69
RPAP3-205	ENST00000548211	FGL2	Q14314	439 aa		4.51	□□□□□ -1.69
RPAP3-205	ENST00000548211	LEXM	Q3ZCV2	418 aa		4.51	□□□□□ -1.69
RPAP3-205	ENST00000548211	KRT28	Q7Z3Y7	464 aa		4.51	□□□□□ -1.69
RPAP3-205	ENST00000548211	PIP4P1	Q86T03	277 aa		4.51	□□□□□ -1.69
RPAP3-205	ENST00000548211	ZBTB46	Q86UZ6	589 aa		4.51	□□□□□ -1.69
RPAP3-205	ENST00000548211	GAS2L3	Q86XJ1	694 aa		4.51	□□□□□ -1.69
RPAP3-205	ENST00000548211	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	4.51	□□□□□ -1.69
RPAP3-205	ENST00000548211	OSR1	Q8TAX0	266 aa	Predicted RBP	4.51	□□□□□ -1.69
RPAP3-205	ENST00000548211	MAP4K1	Q92918	833 aa		4.51	□□□□□ -1.69
RPAP3-205	ENST00000548211	CHMP4C	Q96CF2	233 aa		4.51	□□□□□ -1.69
RPAP3-205	ENST00000548211	MTFMT	Q96DP5	389 aa	Known RBP	4.51	□□□□□ -1.69
RPAP3-205	ENST00000548211	FYTTD1	Q96QD9	318 aa	Known RBP	4.51	□□□□□ -1.69
RPAP3-205	ENST00000548211	ADGRE3	Q9BY15	652 aa		4.51	□□□□□ -1.69
RPAP3-205	ENST00000548211	MS4A7	Q9GZW8	240 aa	Predicted RBP	4.51	□□□□□ -1.69
RPAP3-205	ENST00000548211	SLC12A5	Q9H2X9	1139 aa		4.51	□□□□□ -1.69
RPAP3-205	ENST00000548211	TNS3	Q68CZ2	1445 aa		4.51	□□□□□ -1.69
RPAP3-205	ENST00000548211	TTC3	P53804	2025 aa		4.51	□□□□□ -1.69
RPAP3-205	ENST00000548211	RREB1	Q92766	1687 aa		4.51	□□□□□ -1.69
RPAP3-205	ENST00000548211	COL14A1	Q05707	1796 aa	Known RBP	4.5	□□□□□ -1.69
RPAP3-205	ENST00000548211	NUP188	Q5SRE5	1749 aa		4.5	□□□□□ -1.69
RPAP3-205	ENST00000548211	RRBP1	Q9P2E9	1410 aa	Known RBP	4.5	□□□□□ -1.69
RPAP3-205	ENST00000548211	LOC105371045	A0A1W2PR82	267 aa		4.5	□□□□□ -1.69
RPAP3-205	ENST00000548211	BTN3A1	O00481	513 aa		4.5	□□□□□ -1.69
RPAP3-205	ENST00000548211	MT-CO3	P00414	261 aa		4.5	□□□□□ -1.69
RPAP3-205	ENST00000548211	TH	P07101	528 aa		4.5	□□□□□ -1.69
RPAP3-205	ENST00000548211	CBSL	P0DN79	551 aa		4.5	□□□□□ -1.69
RPAP3-205	ENST00000548211	KIT	P10721	976 aa		4.5	□□□□□ -1.69
RPAP3-205	ENST00000548211	APEH	P13798	732 aa	Known RBP	4.5	□□□□□ -1.69
RPAP3-205	ENST00000548211	CBS	P35520	551 aa		4.5	□□□□□ -1.69
RPAP3-205	ENST00000548211	DIO1	P49895	249 aa		4.5	□□□□□ -1.69
RPAP3-205	ENST00000548211	HTRA4	P83105	476 aa	Predicted RBP	4.5	□□□□□ -1.69
RPAP3-205	ENST00000548211	MEPCE	Q7L2J0	689 aa	Known RBP	4.5	□□□□□ -1.69
RPAP3-205	ENST00000548211	SFTPA1	Q8IWL2	248 aa		4.5	□□□□□ -1.69
RPAP3-205	ENST00000548211	MPP5	Q8N3R9	675 aa		4.5	□□□□□ -1.69
RPAP3-205	ENST00000548211	IGFBPL1	Q8WX77	278 aa		4.5	□□□□□ -1.69
RPAP3-205	ENST00000548211	CTHRC1	Q96CG8	243 aa		4.5	□□□□□ -1.69
RPAP3-205	ENST00000548211	SIGLEC11	Q96RL6	698 aa		4.5	□□□□□ -1.69
RPAP3-205	ENST00000548211	TRIM54	Q9BYV2	358 aa		4.5	□□□□□ -1.69
RPAP3-205	ENST00000548211	PCDH12	Q9NPG4	1184 aa		4.5	□□□□□ -1.69
RPAP3-205	ENST00000548211	PIH1D1	Q9NWS0	290 aa	Known RBP	4.5	□□□□□ -1.69
RPAP3-205	ENST00000548211	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	4.5	□□□□□ -1.69
RPAP3-205	ENST00000548211	DRG1	Q9Y295	367 aa	Known RBP	4.5	□□□□□ -1.69
RPAP3-205	ENST00000548211	CAMTA1	Q9Y6Y1	1673 aa		4.5	□□□□□ -1.69
RPAP3-205	ENST00000548211	SBNO1	A3KN83	1393 aa		4.5	□□□□□ -1.69
RPAP3-205	ENST00000548211	NUP155	O75694	1391 aa		4.5	□□□□□ -1.69
RPAP3-205	ENST00000548211	NRAP	Q86VF7	1730 aa		4.49	□□□□□ -1.69
RPAP3-205	ENST00000548211	SPATA31A5	Q5VU36	1347 aa		4.49	□□□□□ -1.69
RPAP3-205	ENST00000548211	RPGRIP1L	Q68CZ1	1315 aa		4.49	□□□□□ -1.69
RPAP3-205	ENST00000548211	SPATA31A7	Q8IWB4	1347 aa		4.49	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms